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Gene: Pdzd4 (PDZ domain containing 4) Rattus norvegicus
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Symbol: Pdzd4
Name: PDZ domain containing 4
Description: Predicted to have ubiquitin protein ligase activity. Predicted to be involved in protein ubiquitination. Orthologous to human PDZD4 (PDZ domain containing 4); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; cadmium dichloride.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC293856; PDZ domain-containing protein 4; RGD1561214; similar to PDZ domain containing 4
Orthologs:
Homo sapiens (human) : PDZD4 (PDZ domain containing 4)  HGNC  Alliance
Mus musculus (house mouse) : Pdzd4 (PDZ domain containing 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdzd4 (PDZ domain containing 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PDZD4 (PDZ domain containing 4)
Canis lupus familiaris (dog) : PDZD4 (PDZ domain containing 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdzd4 (PDZ domain containing 4)
Sus scrofa (pig) : PDZD4 (PDZ domain containing 4)
Chlorocebus sabaeus (green monkey) : PDZD4 (PDZ domain containing 4)
Heterocephalus glaber (naked mole-rat) : Pdzd4 (PDZ domain containing 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0X156,963,343 - 156,993,591 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX156,963,870 - 156,993,591 (+)Ensembl
Rnor_5.01152,711,639 - 152,741,657 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,716,489 - 159,746,210 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1136,329,561 - 136,359,280 (+)NCBICelera
Cytogenetic MapXq37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Pdzd4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1561214
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.