Lage3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | X | 157,289,497 - 157,290,920 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | X | 152,138,209 - 152,139,632 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | X | 152,138,218 - 152,139,632 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | X | 154,279,337 - 154,280,760 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | X | 157,842,563 - 157,843,986 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | X | 155,514,361 - 155,515,790 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | X | 156,355,376 - 156,356,799 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | X | 156,355,376 - 156,356,799 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 152,095,511 - 152,096,934 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | X | 160,253,757 - 160,255,180 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 1 | 135,757,019 - 135,758,442 (+) | NCBI | | Celera | | | Cytogenetic Map | X | q37 | NCBI | | | | |
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LAGE3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | X | 154,477,775 - 154,479,281 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | X | 154,477,775 - 154,479,281 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | X | 153,706,114 - 153,707,620 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | X | 153,358,435 - 153,360,790 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | X | 153,866,292 - 153,868,647 (-) | NCBI | | Celera | | | Cytogenetic Map | X | q28 | NCBI | | | | | HuRef | X | 142,282,633 - 142,284,801 (-) | NCBI | | HuRef | | | CHM1_1 | X | 153,616,885 - 153,619,241 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | X | 152,714,284 - 152,715,790 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Lage3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | X | 73,395,768 - 73,397,224 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | X | 73,394,882 - 73,397,224 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | X | 74,352,162 - 74,353,618 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | X | 74,351,276 - 74,353,618 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | X | 71,597,501 - 71,598,957 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | X | 70,604,882 - 70,606,338 (-) | NCBI | | MGSCv36 | mm8 | | Celera | X | 65,605,935 - 65,607,391 (-) | NCBI | | Celera | | | Cytogenetic Map | X | A7.3 | NCBI | | | | | cM Map | X | 38.0 | NCBI | | | | |
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Lage3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955580 | 992,190 - 993,617 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955580 | 992,190 - 993,617 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LAGE3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | X | 154,452,148 - 154,454,230 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | X | 154,455,753 - 154,457,259 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | X | 143,919,519 - 143,921,001 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | X | 153,790,497 - 153,791,581 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | X | 153,790,672 - 153,792,549 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LAGE3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | X | 122,185,300 - 122,186,498 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | ROS_Cfam_1.0 | X | 125,326,940 - 125,328,145 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | X | 121,095,948 - 121,097,132 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | X | 123,611,147 - 123,612,224 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | X | 123,372,790 - 123,373,977 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Lage3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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LOC100515685 (Sus scrofa - pig) |
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LAGE3 (Chlorocebus sabaeus - green monkey) |
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Lage3 (Heterocephalus glaber - naked mole-rat) |
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