Idh3g (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma) - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Idh3g (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma) Rattus norvegicus
Analyze
Symbol: Idh3g
Name: isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma
RGD ID: 2863
Description: Enables isocitrate dehydrogenase (NAD+) activity. Involved in several processes, including NADH metabolic process; carboxylic acid metabolic process; and tricarboxylic acid cycle. Predicted to be located in nucleolus. Predicted to be part of mitochondrial isocitrate dehydrogenase complex (NAD+). Predicted to be active in mitochondrion. Orthologous to human IDH3G (isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: IDH; isocitrate dehydrogenase (NAD(+)) 3 gamma; isocitrate dehydrogenase 3 (NAD), gamma; isocitrate dehydrogenase 3 (NAD+) gamma; isocitrate dehydrogenase 3 (NAD+), gamma; isocitrate dehydrogenase 3, gamma; isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial; isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial; isocitric dehydrogenase subunit gamma; MGC94551; NAD (H)-specific isocitrate dehydrogenase gamma subunit; NAD(+)-specific ICDH subunit gamma; NAD+-isocitrate dehydrogenase gamma subunit
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X151,515,244 - 151,524,175 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX151,515,247 - 151,524,171 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX153,656,414 - 153,665,320 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X157,219,644 - 157,228,550 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X154,891,468 - 154,900,374 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X156,999,803 - 157,008,735 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX156,999,826 - 157,008,733 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01152,747,878 - 152,757,622 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,701,345 - 159,710,254 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X159,776,446 - 159,785,611 (-)NCBI
Celera1136,365,515 - 136,374,301 (+)NCBICelera
Cytogenetic MapXq37NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Preparation and properties of mitochondria derived from synaptosomes. Lai JC and Clark JB, Biochem J. 1976 Feb 15;154(2):423-32.
4. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
5. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
6. Molecular cloning and deduced amino acid sequences of the gamma-subunits of rat and monkey NAD(+)-isocitrate dehydrogenases. Nichols BJ, etal., Biochem J 1993 Oct 15;295 ( Pt 2):347-50.
7. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
8. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
9. GOA pipeline RGD automated data pipeline
10. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
11. Evaluation by mutagenesis of the importance of 3 arginines in alpha, beta, and gamma subunits of human NAD-dependent isocitrate dehydrogenase. Soundar S, etal., J Biol Chem. 2003 Dec 26;278(52):52146-53. doi: 10.1074/jbc.M306178200. Epub 2003 Oct 10.
12. Isolation and expression of rat interferon beta gene and growth-inhibitory effect of its expression on rat glioma cells. Yokoyama S, etal., Biochem Biophys Res Commun 1997 Mar 27;232(3):698-701.
Additional References at PubMed
PMID:2605193   PMID:9286695   PMID:12477932   PMID:14651853   PMID:18614015   PMID:25931508   PMID:28098230   PMID:29476059   PMID:31505169  


Genomics

Comparative Map Data
Idh3g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X151,515,244 - 151,524,175 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX151,515,247 - 151,524,171 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX153,656,414 - 153,665,320 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X157,219,644 - 157,228,550 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X154,891,468 - 154,900,374 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X156,999,803 - 157,008,735 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX156,999,826 - 157,008,733 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01152,747,878 - 152,757,622 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,701,345 - 159,710,254 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X159,776,446 - 159,785,611 (-)NCBI
Celera1136,365,515 - 136,374,301 (+)NCBICelera
Cytogenetic MapXq37NCBI
IDH3G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X153,785,768 - 153,794,375 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX153,785,766 - 153,794,512 (-)EnsemblGRCh38hg38GRCh38
GRCh37X153,051,223 - 153,059,830 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X152,704,415 - 152,713,161 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X152,572,067 - 152,580,814NCBI
CeleraX153,284,902 - 153,293,648 (-)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX141,708,249 - 141,717,006 (-)NCBIHuRef
CHM1_1X152,925,630 - 152,934,387 (-)NCBICHM1_1
T2T-CHM13v2.0X152,059,431 - 152,068,038 (-)NCBIT2T-CHM13v2.0
Idh3g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X72,822,569 - 72,830,471 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX72,822,569 - 72,830,503 (-)EnsemblGRCm39 Ensembl
GRCm38X73,778,963 - 73,786,897 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX73,778,963 - 73,786,897 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X71,024,302 - 71,032,236 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X70,031,683 - 70,039,617 (-)NCBIMGSCv36mm8
CeleraX65,031,236 - 65,039,170 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX37.41NCBI
Idh3g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955580500,825 - 507,608 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955580500,712 - 507,512 (-)NCBIChiLan1.0ChiLan1.0
IDH3G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1X153,830,046 - 153,838,677 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X143,336,460 - 143,345,274 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X153,222,309 - 153,231,135 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX153,222,309 - 153,231,135 (-)Ensemblpanpan1.1panPan2
IDH3G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,599,368 - 121,608,707 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,599,368 - 121,608,643 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX106,928,530 - 106,937,871 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X124,740,839 - 124,750,181 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX124,740,831 - 124,750,153 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X120,510,113 - 120,519,453 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X123,025,113 - 123,034,451 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X122,787,308 - 122,796,645 (-)NCBIUU_Cfam_GSD_1.0
Idh3g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X118,928,456 - 118,937,516 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936809666,337 - 675,214 (-)EnsemblSpeTri2.0
SpeTri2.0NW_004936809666,231 - 675,279 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IDH3G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,528,585 - 124,537,575 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,528,643 - 124,537,570 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X142,093,229 - 142,102,047 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IDH3G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X128,212,660 - 128,221,637 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606566,079,983 - 66,088,967 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Idh3g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624946461,780 - 472,336 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624946465,832 - 472,259 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Idh3g
11 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:141
Count of miRNA genes:120
Interacting mature miRNAs:125
Transcripts:ENSRNOT00000056382
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
634346Insul4Insulin level QTL 40blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)X126975089152453651Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 74 35 41 11 8
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_031551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006229551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006229552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006229553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006229554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC096338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC083688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ211766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214482 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ216691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ217943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ224843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ225535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ226989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U63009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X74125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000081819   ⟹   ENSRNOP00000073128
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX151,515,247 - 151,524,171 (-)Ensembl
Rnor_6.0 EnsemblX156,999,826 - 157,008,733 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000113059   ⟹   ENSRNOP00000096912
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX151,515,247 - 151,524,171 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000113588   ⟹   ENSRNOP00000085780
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX151,515,255 - 151,524,128 (-)Ensembl
RefSeq Acc Id: NM_031551   ⟹   NP_113739
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X151,515,244 - 151,524,155 (-)NCBI
Rnor_6.0X156,999,826 - 157,008,735 (+)NCBI
Rnor_5.01152,747,878 - 152,757,622 (+)NCBI
RGSC_v3.4X159,701,345 - 159,710,254 (-)RGD
Celera1136,365,515 - 136,374,301 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006229551   ⟹   XP_006229613
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X151,515,244 - 151,524,166 (-)NCBI
Rnor_6.0X156,999,890 - 157,008,735 (+)NCBI
Rnor_5.01152,747,878 - 152,757,622 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006229552   ⟹   XP_006229614
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X151,515,244 - 151,524,175 (-)NCBI
Rnor_6.0X156,999,803 - 157,008,735 (+)NCBI
Rnor_5.01152,747,878 - 152,757,622 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006229553   ⟹   XP_006229615
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X151,515,244 - 151,524,147 (-)NCBI
Rnor_6.0X156,999,850 - 157,008,735 (+)NCBI
Rnor_5.01152,747,878 - 152,757,622 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006229554   ⟹   XP_006229616
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X151,515,244 - 151,524,147 (-)NCBI
Rnor_6.0X156,999,874 - 157,008,735 (+)NCBI
Rnor_5.01152,747,878 - 152,757,622 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_113739   ⟸   NM_031551
- Peptide Label: precursor
- UniProtKB: P70577 (UniProtKB/Swiss-Prot),   P41565 (UniProtKB/Swiss-Prot),   Q5XIJ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006229614   ⟸   XM_006229552
- Peptide Label: isoform X2
- UniProtKB: P70577 (UniProtKB/Swiss-Prot),   P41565 (UniProtKB/Swiss-Prot),   A0A0G2K4Q0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006229615   ⟸   XM_006229553
- Peptide Label: isoform X3
- UniProtKB: A6KRV3 (UniProtKB/TrEMBL),   A6KRV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006229616   ⟸   XM_006229554
- Peptide Label: isoform X3
- UniProtKB: A6KRV3 (UniProtKB/TrEMBL),   A6KRV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006229613   ⟸   XM_006229551
- Peptide Label: isoform X1
- UniProtKB: A0A8I6GDC1 (UniProtKB/TrEMBL),   A6KRV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000073128   ⟸   ENSRNOT00000081819
RefSeq Acc Id: ENSRNOP00000096912   ⟸   ENSRNOT00000113059
RefSeq Acc Id: ENSRNOP00000085780   ⟸   ENSRNOT00000113588
Protein Domains
Isopropylmalate dehydrogenase-like

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P41565-F1-model_v2 AlphaFold P41565 1-393 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2863 AgrOrtholog
BioCyc Gene G2FUF-661 BioCyc
BioCyc Pathway PWY-5690 [TCA cycle II (plants and fungi)] BioCyc
Ensembl Genes ENSRNOG00000055572 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000073128 ENTREZGENE
  ENSRNOP00000073128.2 UniProtKB/TrEMBL
  ENSRNOP00000085780 ENTREZGENE
  ENSRNOP00000085780.1 UniProtKB/TrEMBL
  ENSRNOP00000096912 ENTREZGENE
  ENSRNOP00000096912.1 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000081819 ENTREZGENE
  ENSRNOT00000081819.2 UniProtKB/TrEMBL
  ENSRNOT00000113059 ENTREZGENE
  ENSRNOT00000113059.1 UniProtKB/TrEMBL
  ENSRNOT00000113588 ENTREZGENE
  ENSRNOT00000113588.1 UniProtKB/TrEMBL
Gene3D-CATH Isopropylmalate Dehydrogenase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7189278 IMAGE-MGC_LOAD
InterPro IsoCit/isopropylmalate_DH_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Isocitrate_DH_NAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IsoPropMal-DH-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:25179 UniProtKB/TrEMBL
MGC_CLONE MGC:94551 IMAGE-MGC_LOAD
NCBI Gene 25179 ENTREZGENE
PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT GAMMA 1, MITOCHONDRIAL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ISOCITRATE DEHYDROGENASE [NAD] SUBUNIT GAMMA, MITOCHONDRIAL UniProtKB/TrEMBL
Pfam Iso_dh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Idh3g PhenoGen
PROSITE IDH_IMDH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART Iso_dh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Isocitrate/Isopropylmalate dehydrogenase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0G2K4Q0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GDC1 ENTREZGENE, UniProtKB/TrEMBL
  A6KRV1 ENTREZGENE, UniProtKB/TrEMBL
  A6KRV2_RAT UniProtKB/TrEMBL
  A6KRV3 ENTREZGENE, UniProtKB/TrEMBL
  A6KRV4_RAT UniProtKB/TrEMBL
  A6KRV5_RAT UniProtKB/TrEMBL
  A6KRV6_RAT UniProtKB/TrEMBL
  IDHG1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  P70577 ENTREZGENE
  Q5XIJ3 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary P70577 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-08-08 Idh3g  isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma  Idh3g  isocitrate dehydrogenase (NAD(+)) 3 gamma  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2019-04-29 Idh3g  isocitrate dehydrogenase (NAD(+)) 3 gamma  Idh3g  isocitrate dehydrogenase 3 (NAD), gamma  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-30 Idh3g  isocitrate dehydrogenase 3 (NAD), gamma    isocitrate dehydrogenase 3, gamma  Name updated 1299863 APPROVED
2002-11-06 Idh3g  isocitrate dehydrogenase 3, gamma    isocitrate dehydrogenase 3 (NAD+), gamma  Name updated 625702 APPROVED
2001-10-23 Idh3g  NAD (H)-specific isocitrate dehydrogenase gamma subunit      Name withdrawn 68913 WITHDRAWN
2001-10-23 Idh3g  isocitrate dehydrogenase 3 (NAD+), gamma      Name updated to reflect Human and Mouse nomenclature 68913 APPROVED

RGD Curation Notes
Note Type Note Reference
gene_expression isolated from the rat epididymis 633073
gene_homology sequence similar to the pig heart enzyme 633073