Gene: Opn1mw (opsin 1, medium wave sensitive) Rattus norvegicus
Analyze
Symbol:
Opn1mw
Name:
opsin 1, medium wave sensitive
RGD ID:
620978
Description:
Predicted to enable identical protein binding activity and photoreceptor activity. Predicted to be involved in positive regulation of cytokinesis. Located in photoreceptor outer segment. Human ortholog(s) of this gene implicated in blue cone monochromacy; red color blindness; and red-green color blindness. Orthologous to several human genes including OPN1LW (opsin 1, long wave sensitive) and OPN1MW (opsin 1, medium wave sensitive); PARTICIPATES IN retinoid cycle metabolic pathway; visual phototransduction pathway; INTERACTS WITH 17alpha-ethynylestradiol; ammonium chloride; monosodium L-glutamate.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
green cone photoreceptor pigment; green-sensitive opsin; medium wavelength-sensitive cone opsin; medium-wave-sensitive opsin 1; opsin 1 (cone pigments), medium-wave-sensitive; opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan); opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan), green opsin
RGD Orthologs
Alliance Genes
More Info
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More Info
Species
Gene symbol and name
Data Source
Assertion derived from
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Orthologs 1
Homo sapiens (human):
OPN1MW (opsin 1, medium wave sensitive)
HGNC
Ensembl, Inparanoid, OMA, OrthoDB, Panther
Mus musculus (house mouse):
Opn1mw (opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan))
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
LOC494564 (medium-wave-sensitive opsin)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Other homologs 2
Homo sapiens (human):
OPN1LW (opsin 1, long wave sensitive)
HGNC
Ensembl, HomoloGene, Panther
Homo sapiens (human):
OPN1MW2 (opsin 1, medium wave sensitive 2)
HGNC
Ensembl, OrthoDB, Panther
Homo sapiens (human):
OPN1MW3 (opsin 1, medium wave sensitive 3)
HGNC
Ensembl, Panther
Homo sapiens (human):
ZNF76 (zinc finger protein 76)
HGNC
OMA
Alliance orthologs 3
Mus musculus (house mouse):
Opn1mw (opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan))
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
OPN1LW (opsin 1, long wave sensitive)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Homo sapiens (human):
OPN1MW (opsin 1, medium wave sensitive)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Homo sapiens (human):
OPN1MW2 (opsin 1, medium wave sensitive 2)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Homo sapiens (human):
OPN1MW3 (opsin 1, medium wave sensitive 3)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|SonicParanoid)
Danio rerio (zebrafish):
opn1lw2 (opsin 1 (cone pigments), long-wave-sensitive, 2)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
opn1lw1 (opsin 1 (cone pigments), long-wave-sensitive, 1)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):
opn1lw
Alliance
DIOPT (Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl mRatBN7.2 X 151,905,056 - 151,925,419 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl X 151,905,096 - 151,925,388 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx X 154,046,219 - 154,066,443 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 X 157,609,455 - 157,629,679 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 X 155,281,257 - 155,301,483 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 X 156,569,683 - 156,589,907 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl X 156,569,683 - 156,589,907 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 1 152,310,261 - 152,330,485 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 X 160,095,742 - 160,115,966 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 X 160,171,359 - 160,191,584 (+) NCBI Celera 1 135,969,802 - 135,990,029 (-) NCBI Celera Cytogenetic Map X q37 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Disease Annotations - ClinVar
Imported Disease Annotations - CTD