PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html ).
Term: pyruvate metabolic pathway
Accession: PW:0000043
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Definition: Those metabolic reactions involved in the synthesis, utilization and/or degradation of pyruvate - a salt, ester, or anionic form of pyruvic acid. Pyruvate, which is the end-product of glycolysis, can be converted to lactate under anaerobic conditions, can be further oxidized via the Krebs or citrate cycle or can be converted back to glucose via gluconeogenesis.
Synonyms: related_synonym: Pyruvate metabolism; pyruvate metabolic process
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Acaca
acetyl-CoA carboxylase alpha
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr10:69,511,627...69,773,888
Ensembl chr10:69,511,857...69,773,888
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Acacb
acetyl-CoA carboxylase beta
IEA
KEGG
rno:00620
NCBI chr12:48,026,394...48,138,214
Ensembl chr12:48,026,394...48,138,214
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Acat1
acetyl-CoA acetyltransferase 1
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:62,876,003...62,905,042
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Acat2
acetyl-CoA acetyltransferase 2
IEA
KEGG
rno:00620
NCBI chr 1:50,100,840...50,118,886
Ensembl chr 1:50,100,817...50,135,095
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Acot12
acyl-CoA thioesterase 12
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 2:24,721,648...24,763,686
Ensembl chr 2:24,721,910...24,765,298
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Acss1
acyl-CoA synthetase short-chain family member 1
IEA
KEGG
rno:00620
NCBI chr 3:159,910,809...159,960,748
Ensembl chr 3:159,910,809...159,960,748
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Acss2
acyl-CoA synthetase short-chain family member 2
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 3:164,464,124...164,507,607
Ensembl chr 3:164,464,055...164,519,830
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Acyp1
acylphosphatase 1
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 6:110,650,213...110,663,404
Ensembl chr 6:110,650,213...110,663,612
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Acyp2
acylphosphatase 2
IEA
KEGG
rno:00620
NCBI chr14:108,402,837...108,572,367
Ensembl chr14:108,402,544...108,633,318
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Akr1b1
aldo-keto reductase family 1 member B1
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 4:63,899,222...63,913,315
Ensembl chr 4:63,899,222...63,913,315
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Aldh1a1
aldehyde dehydrogenase 1 family, member A1
IEA
KEGG
rno:00620
NCBI chr 1:227,426,939...227,579,497
Ensembl chr 1:227,427,070...227,579,500
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Aldh1a7
aldehyde dehydrogenase family 1, subfamily A7
IEA
KEGG
rno:00620
NCBI chr 1:227,627,977...227,667,877
Ensembl chr 1:227,627,448...227,672,523
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Aldh1b1
aldehyde dehydrogenase 1 family, member B1
IEA
KEGG
rno:00620
NCBI chr 5:64,859,000...64,864,008
Ensembl chr 5:64,858,934...64,864,365
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Aldh2
aldehyde dehydrogenase 2 family member
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr12:40,610,244...40,643,220
Ensembl chr12:40,610,224...40,643,219
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Aldh3a2
aldehyde dehydrogenase 3 family, member A2
IEA
KEGG
rno:00620
NCBI chr10:46,427,789...46,448,449
Ensembl chr10:46,407,993...46,448,648
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Aldh7a1
aldehyde dehydrogenase 7 family, member A1
IEA
KEGG
rno:00620
NCBI chr18:52,208,035...52,240,293
Ensembl chr18:52,204,161...52,240,467
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Aldh9a1
aldehyde dehydrogenase 9 family, member A1
IEA
KEGG
rno:00620
NCBI chr13:82,038,679...82,055,478
Ensembl chr13:82,038,533...82,055,481
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Dlat
dihydrolipoamide S-acetyltransferase
ISO IEA
KEGG SMPDB RGD
PMID:11795479
SMP:00060 rno:00620, RGD:2307427
NCBI chr 8:59,875,537...59,900,947
Ensembl chr 8:59,868,214...59,900,818 Ensembl chr 1:59,868,214...59,900,818
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Dld
dihydrolipoamide dehydrogenase
ISO IEA
KEGG SMPDB RGD
PMID:11795479
SMP:00060 rno:00620, RGD:2307427
NCBI chr 6:53,631,686...53,655,059
Ensembl chr 6:53,619,631...53,652,354
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Glo1
glyoxalase 1
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr20:8,665,061...8,683,095
Ensembl chr20:8,665,061...8,683,191
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Grhpr
glyoxylate and hydroxypyruvate reductase
ISO
SMPDB
SMP:00060
NCBI chr 5:64,029,856...64,039,287
Ensembl chr 5:64,022,368...64,039,276
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Hagh
hydroxyacyl glutathione hydrolase
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr10:14,379,400...14,394,046
Ensembl chr10:14,382,410...14,394,043
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Ldha
lactate dehydrogenase A
IEA
KEGG
rno:00620
NCBI chr 1:106,508,092...106,517,512
Ensembl chr 1:106,502,182...106,517,521
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Ldhal1
lactate dehydrogenase A like 1
IEA
KEGG
rno:00620
NCBI chr 8:38,621,351...38,622,975
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Ldhal6b
lactate dehydrogenase A-like 6B
IEA
KEGG
rno:00620
NCBI chr 1:48,402,997...48,404,420
Ensembl chr 1:48,403,012...48,404,851
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Ldhb
lactate dehydrogenase B
IEA
KEGG
rno:00620
NCBI chr 4:177,159,389...177,177,408
Ensembl chr 4:177,159,392...177,177,408
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Ldhc
lactate dehydrogenase C
IEA
KEGG
rno:00620
NCBI chr 1:106,522,140...106,539,649
Ensembl chr 1:106,522,236...106,542,802
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Ldhd
lactate dehydrogenase D
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr19:56,492,827...56,497,695
Ensembl chr19:56,482,924...56,509,197
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Mdh1
malate dehydrogenase 1
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr14:99,831,934...99,847,227
Ensembl chr14:99,831,615...99,847,232
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Mdh2
malate dehydrogenase 2
IEA
KEGG
rno:00620
NCBI chr12:26,530,886...26,543,841
Ensembl chr12:26,530,881...26,543,841
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Me1
malic enzyme 1
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 8:96,429,057...96,540,244
Ensembl chr 8:96,429,057...96,540,275
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Me2
malic enzyme 2
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr18:69,626,073...69,676,218
Ensembl chr18:69,626,087...69,676,218
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Me3
malic enzyme 3
IEA
KEGG
rno:00620
NCBI chr 1:152,946,595...153,148,026
Ensembl chr 1:152,946,628...153,148,026
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Pc
pyruvate carboxylase
IEA ISO
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 1:211,228,708...211,327,792
Ensembl chr 1:211,228,731...211,329,940
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Pck1
phosphoenolpyruvate carboxykinase 1
IEA ISO
KEGG lists it, no info
KEGG SMPDB
SMP:00060 rno:00620
NCBI chr 3:182,348,572...182,354,521
Ensembl chr 3:182,348,572...182,354,561
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Pck2
phosphoenolpyruvate carboxykinase 2 (mitochondrial)
IEA
KEGG
rno:00620
NCBI chr15:32,997,853...33,006,691
Ensembl chr15:32,997,834...33,016,864
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Pdha1
pyruvate dehydrogenase E1 subunit alpha 1
IEA ISO
KEGG lists it but there is info
KEGG SMPDB RGD
PMID:11795479
SMP:00060 rno:00620, RGD:2307427
NCBI chr X:38,509,158...38,522,986
Ensembl chr X:38,509,084...38,522,536
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Pdha2
pyruvate dehydrogenase E1 subunit alpha 2
IEA ISO
KEGG RGD
PMID:11795479
rno:00620, RGD:2307427
NCBI chr 2:232,545,550...232,547,098
Ensembl chr 2:232,415,088...232,549,624
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Pdhb
pyruvate dehydrogenase E1 subunit beta
ISO IEA
KEGG SMPDB RGD
PMID:11795479
SMP:00060 rno:00620, RGD:2307427
NCBI chr15:19,182,789...19,188,731
Ensembl chr15:19,181,208...19,188,976
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Pdhx
pyruvate dehydrogenase complex, component X
ISO
RGD
PMID:11795479
RGD:2307427
NCBI chr 3:109,826,579...109,886,869
Ensembl chr 3:109,827,209...109,886,905
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Pdk1
pyruvate dehydrogenase kinase 1
ISO
RGD
PMID:11795479 PMID:17310282
RGD:2307427 , RGD:2307428
NCBI chr 3:77,113,464...77,144,145
Ensembl chr 3:77,113,473...77,144,145
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Pdk2
pyruvate dehydrogenase kinase 2
ISO
RGD
PMID:11795479 PMID:17310282
RGD:2307427 , RGD:2307428
NCBI chr10:80,469,388...80,483,988
Ensembl chr10:80,469,389...80,484,355
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Pdk3
pyruvate dehydrogenase kinase 3
ISO
RGD
PMID:11795479 PMID:17310282
RGD:2307427 , RGD:2307428
NCBI chr X:62,480,535...62,547,371
Ensembl chr X:62,480,535...62,547,371
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Pdk4
pyruvate dehydrogenase kinase 4
ISO
RGD
PMID:11795479 PMID:17310282
RGD:2307427 , RGD:2307428
NCBI chr 4:34,558,327...34,568,329
Ensembl chr 4:34,556,330...34,568,381
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Pdp1
pyruvate dehydrogenase phosphatase catalytic subunit 1
ISO
RGD
PMID:17310282
RGD:2307428
NCBI chr 5:30,245,699...30,252,494
Ensembl chr 5:30,242,704...30,253,960
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Pdp2
pyruvate dehydrogenase phosphatase catalytic subunit 2
ISO
RGD
PMID:17310282
RGD:2307428
NCBI chr19:392,858...400,529
Ensembl chr19:392,183...400,902
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Pklr
pyruvate kinase L/R
IEA IDA ISO
KEGG SMPDB RGD
PMID:4273555
SMP:00060 rno:00620, RGD:2302790
NCBI chr 2:176,840,779...176,849,637
Ensembl chr 2:176,840,764...176,849,644
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Pkm
pyruvate kinase M1/2
IDA
RGD
PMID:4273555
RGD:2302790
NCBI chr 8:68,949,731...68,975,394
Ensembl chr 8:68,948,815...68,975,396
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