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ONTOLOGY REPORT - ANNOTATIONS
Term:cyclic nucleotide binding
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Accession:GO:0030551 term browser browse the term
Definition:Interacting selectively and non-covalently with a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.

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cyclic nucleotide binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase JBrowse link 10 88,490,798 88,497,357 RGD:6480491
G Fkbp1b FKBP prolyl isomerase 1B JBrowse link 6 29,975,863 29,987,252 RGD:61587
G Kcnh1 potassium voltage-gated channel subfamily H member 1 JBrowse link 13 110,920,712 111,232,291 RGD:1624291
RGD:1600115
cAMP binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bves blood vessel epicardial substance JBrowse link 20 50,439,885 50,474,678 RGD:1624291
RGD:13792537
G Cnbd2 cyclic nucleotide binding domain containing 2 JBrowse link 3 152,382,245 152,448,105 RGD:1624291
RGD:13792537
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 JBrowse link 16 69,878,513 69,899,075 RGD:1600115
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 JBrowse link 1 170,238,959 170,246,858 RGD:1600115
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 JBrowse link 2 50,099,576 50,499,799 RGD:1600115
RGD:1624291
G Hcn2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 JBrowse link 7 12,851,730 12,870,087 RGD:1600115
G Hcn3 hyperpolarization-activated cyclic nucleotide-gated potassium channel 3 JBrowse link 2 188,458,851 188,471,916 RGD:1600115
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 JBrowse link 8 63,599,907 63,637,327 RGD:1600115
G LOC108348053 cyclic nucleotide-gated olfactory channel JBrowse link 16 69,873,485 69,877,475 RGD:1600115
G Pde10a phosphodiesterase 10A JBrowse link 1 52,360,296 52,544,448 RGD:1624291
G Pde1c phosphodiesterase 1C JBrowse link 4 86,359,762 86,925,044 RGD:68318
G Pde2a phosphodiesterase 2A JBrowse link 1 166,534,643 166,626,158 RGD:1600115
RGD:1624291
G Pde4a phosphodiesterase 4A JBrowse link 8 22,189,533 22,234,036 RGD:1624291
RGD:1600115
G Pde4b phosphodiesterase 4B JBrowse link 5 121,759,236 122,136,814 RGD:1624291
RGD:1600115
G Pde4d phosphodiesterase 4D JBrowse link 2 40,219,999 41,468,551 RGD:1600115
RGD:1624291
G Popdc2 popeye domain containing 2 JBrowse link 11 64,915,041 64,954,704 RGD:1624291
RGD:13792537
G Popdc3 popeye domain containing 3 JBrowse link 20 50,394,617 50,422,551 RGD:1624291
RGD:13792537
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link 10 97,940,705 97,959,199 RGD:2312572
G Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta JBrowse link 12 17,614,536 17,713,567 RGD:2312572
RGD:1600115
G Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha JBrowse link 8 117,486,085 117,548,768 RGD:2312572
RGD:1600115
G Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta JBrowse link 6 51,265,509 51,356,383 RGD:2312570
RGD:1600115
RGD:2312572
G Rapgef2 Rap guanine nucleotide exchange factor 2 JBrowse link 2 177,836,191 178,057,378 RGD:1600115
RGD:1624291
G Rapgef3 Rap guanine nucleotide exchange factor 3 JBrowse link 7 139,232,263 139,254,668 RGD:9850088
G Rapgef4 Rap guanine nucleotide exchange factor 4 JBrowse link 3 58,632,338 58,925,127 RGD:632397
RGD:1600115
RGD:1624291
cGMP binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 JBrowse link 14 38,155,771 38,171,107 RGD:6902904
RGD:13792537
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 JBrowse link 16 69,878,513 69,899,075 RGD:6902904
RGD:13792537
RGD:7241219
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 JBrowse link 9 43,807,412 43,858,225 RGD:70699
RGD:13792537
RGD:1624291
RGD:1600869
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 JBrowse link 1 170,238,959 170,246,858 RGD:7241219
RGD:13792537
G Cngb1 cyclic nucleotide gated channel subunit beta 1 JBrowse link 19 10,142,440 10,206,618 RGD:1624291
RGD:13792537
G Cngb3 cyclic nucleotide gated channel subunit beta 3 JBrowse link 5 33,097,353 33,507,467 RGD:1624291
RGD:13792537
G LOC103690077 cyclic nucleotide-gated olfactory channel-like JBrowse link 1 69,242,991 69,247,052 RGD:13792537
G LOC108348053 cyclic nucleotide-gated olfactory channel JBrowse link 16 69,873,485 69,877,475 RGD:13792537
G Pde10a phosphodiesterase 10A JBrowse link 1 52,360,296 52,544,448 RGD:1600115
G Pde11a phosphodiesterase 11A JBrowse link 3 62,818,502 63,211,843 RGD:1624291
G Pde2a phosphodiesterase 2A JBrowse link 1 166,534,643 166,626,158 RGD:1600115
RGD:1624291
G Pde5a phosphodiesterase 5A JBrowse link 2 226,899,604 227,044,916 RGD:1600115
RGD:1624291
G Pde6g phosphodiesterase 6G JBrowse link 10 109,620,499 109,625,214 RGD:1600115
G Pde6h phosphodiesterase 6H JBrowse link 4 170,947,723 170,963,046 RGD:1600115
G Prkg1 protein kinase cGMP-dependent 1 JBrowse link 1 248,982,039 250,300,952 RGD:1624291
G Prkg2 protein kinase cGMP-dependent 2 JBrowse link 14 12,217,121 12,313,616 RGD:1600115
G Rapgef2 Rap guanine nucleotide exchange factor 2 JBrowse link 2 177,836,191 178,057,378 RGD:1624291
cyclic-di-GMP binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link 18 28,529,537 28,535,828 RGD:1624291
RGD:13792537
cyclic-GMP-AMP binding term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc19a1 solute carrier family 19 member 1 JBrowse link 20 12,334,675 12,354,517 RGD:1624291
G Sting1 stimulator of interferon response cGAMP interactor 1 JBrowse link 18 28,529,537 28,535,828 RGD:11344949
RGD:1624291
RGD:13792537
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20216
    binding 16745
      small molecule binding 2600
        nucleotide binding 2149
          cyclic nucleotide binding 40
            2',5-3',5'-cyclic GMP-AMP binding 0
            cAMP binding 24
            cGMP binding 17
            cyclic-GMP-AMP binding 2
            cyclic-di-GMP binding 1
Path 2
Term Annotations click to browse term
  molecular_function 20216
    binding 16745
      organic cyclic compound binding 5713
        nucleoside phosphate binding 2149
          nucleotide binding 2149
            cyclic nucleotide binding 40
              2',5-3',5'-cyclic GMP-AMP binding 0
              cAMP binding 24
              cGMP binding 17
              cyclic-GMP-AMP binding 2
              cyclic-di-GMP binding 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.