Gene: Cngb1 (cyclic nucleotide gated channel beta 1) Rattus norvegicus
Analyze
Symbol: Cngb1
Name: cyclic nucleotide gated channel beta 1
Description: ENCODES a protein that exhibits intracellular cAMP-activated cation channel activity; intracellular cGMP-activated cation channel activity; cGMP binding (ortholog); INVOLVED IN protein heterotetramerization; regulation of cytosolic calcium ion concentration; cation transport (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium/calcium-mediated signaling pathway; retinitis pigmentosa pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 45 (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex; plasma membrane; terminal bouton; INTERACTS WITH ammonium chloride; bisphenol A; C60 fullerene
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: cyclic nucleotide-gated cation channel beta-1; cyclic nucleotide-gated channel beta subunit 1; gene model 1959, (NCBI); Gm1959; LOC360297
Orthologs:
Homo sapiens (human) : CNGB1 (cyclic nucleotide gated channel beta 1)  HGNC  Alliance
Mus musculus (house mouse) : Cngb1 (cyclic nucleotide gated channel beta 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cngb1 (cyclic nucleotide gated channel beta 1)
Pan paniscus (bonobo/pygmy chimpanzee) : CNGB1 (cyclic nucleotide gated channel beta 1)
Canis lupus familiaris (dog) : CNGB1 (cyclic nucleotide gated channel beta 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cngb1 (cyclic nucleotide gated channel beta 1)
Sus scrofa (pig) : CNGB1 (cyclic nucleotide gated channel beta 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01910,142,440 - 10,206,618 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01910,126,285 - 10,190,852 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41910,186,416 - 10,257,296 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11910,191,241 - 10,262,122NCBI
Celera199,619,420 - 9,683,573 (+)NCBICelera
Cytogenetic Map19p13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cngb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621809
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE