Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:cGMP binding
go back to main search page
Accession:GO:0030553 term browser browse the term
Definition:Binding to cGMP, the nucleotide cyclic GMP (guanosine 3',5'-cyclophosphate).
Synonyms:exact_synonym: 3',5' cGMP binding;   cyclic GMP binding


show annotations for term's descendants           Sort by:
cGMP binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 enables IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:18048449 PMID:21873635 RGD:6902904, RGD:13792537 NCBI chr14:35,566,947...35,605,065
Ensembl chr14:35,567,125...35,605,065 		JBrowse link
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 enables IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:18048449 PMID:22786723 PMID:21873635 RGD:6902904, RGD:7241219, RGD:13792537 NCBI chr  X:149,696,999...149,715,051
Ensembl chr  X:149,696,997...149,715,051 		JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 enables NAS
IDA
ISO
IBA		 (PMID:24164424)
PMID:21873635		 RGD PMID:24164424 PMID:10984544 PMID:11387380 PMID:21873635 RGD:70699, RGD:1600869, RGD:13792537 NCBI chr 9:39,447,532...39,497,883
Ensembl chr 9:39,448,034...39,493,183 		JBrowse link
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 enables IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:22786723 PMID:21873635 RGD:7241219, RGD:13792537 NCBI chr 1:159,752,357...159,756,369
Ensembl chr 1:159,752,357...159,756,375 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 enables IBA
ISO		 PMID:21873635
(PMID:24164424)		 RGD PMID:24164424 PMID:21873635 RGD:13792537 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Cngb3 cyclic nucleotide gated channel subunit beta 3 enables ISO
IBA		 (PMID:24164424)
PMID:21873635		 RGD PMID:24164424 PMID:21873635 RGD:13792537 NCBI chr 5:32,746,988...32,995,121
Ensembl chr 5:32,746,988...32,995,121 		JBrowse link
G Cyct cytochrome c, testis enables IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:61,290,090...61,297,158
Ensembl chr 3:60,913,562...61,297,158 		JBrowse link
G Pde10a phosphodiesterase 10A enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:51,765,743...52,218,086
Ensembl chr 1:51,770,132...52,216,563 		JBrowse link
G Pde11a phosphodiesterase 11A enables ISO
IEA		 (PMID:19689430)
GO_REF:0000107		 RGD
Ensembl		 PMID:19689430 GO_REF:0000107 NCBI chr 3:60,913,562...61,297,154
Ensembl chr 3:60,913,562...61,297,158 		JBrowse link
G Pde2a phosphodiesterase 2A enables ISO
IEA		 (PMID:15938621), (PMID:17329248), (PMID:19689430), (PMID:19828435)
GO_REF:0000107
(MGI:5294304|PMID:15210692), (MGI:5294310|PMID:12271124)		 RGD
Ensembl		 PMID:12271124 PMID:15210692 PMID:15938621 PMID:17329248 PMID:19689430 More... GO_REF:0000107 MGI:5294304 MGI:5294310 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434 		JBrowse link
G Pde5a phosphodiesterase 5A enables ISO
IEA		 (MGI:2450821|PMID:12554648), (MGI:3810583|PMID:18534985)
GO_REF:0000107		 RGD
Ensembl		 PMID:12554648 PMID:18534985 GO_REF:0000107 MGI:2450821 MGI:3810583 NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701 		JBrowse link
G Pde6g phosphodiesterase 6G enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:105,721,502...105,727,204
Ensembl chr10:105,721,682...105,726,719 		JBrowse link
G Pde6h phosphodiesterase 6H enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:169,857,793...169,872,969
Ensembl chr 4:169,857,812...169,872,969 		JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 enables ISO (MGI:1890119|PMID:10671526) RGD PMID:10671526 MGI:1890119 NCBI chr 1:228,409,883...229,638,794
Ensembl chr 1:228,408,947...229,639,080 		JBrowse link
G Prkg2 protein kinase cGMP-dependent 2 enables IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:10,559,882...10,668,479
Ensembl chr14:10,559,882...10,666,888 		JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 NOT|enables ISO (PMID:10608844), (PMID:11359771) RGD PMID:10608844 PMID:11359771 NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20585
    binding 17486
      ion binding 5656
        anion binding 2529
          cGMP binding 16
Path 2
Term Annotations click to browse term
  molecular_function 20585
    binding 17486
      organic cyclic compound binding 6095
        nucleoside phosphate binding 2273
          nucleotide binding 2273
            purine nucleotide binding 2113
              purine ribonucleotide binding 1962
                guanyl ribonucleotide binding 431
                  cGMP binding 16
paths to the root