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ONTOLOGY REPORT - ANNOTATIONS

Term:synaptic vesicle transport
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Accession:GO:0048489 term browser browse the term
Definition:The directed movement of synaptic vesicles.
Synonyms:related_synonym: synaptic vesicle fission;   synaptic vesicle fusion;   synaptic vesicle trafficking
 alt_id: GO:0016181


show annotations for term's descendants           Sort by:
synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5 cyclin-dependent kinase 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148594 (PMID:14622577)		 Ensembl
RGD		 PMID:14622577 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IDA RGD PMID:19755421 RGD:2316240 NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:2183527 (PMID:17418794) RGD PMID:17418794 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Kif5a kinesin family member 5A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858 		JBrowse link
G Kif5b kinesin family member 5B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:51,489,904...51,527,508
Ensembl chr17:51,489,944...51,527,508 		JBrowse link
G Lin7a lin-7 homolog A, crumbs cell polarity complex component involved_in
acts_upstream_of_or_within		 IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:14622577)		 Ensembl
GO_Central
RGD		 PMID:14622577 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:42,586,704...42,742,609
Ensembl chr 7:42,586,719...42,730,550 		JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:95,846,888...95,849,628
Ensembl chr 1:95,846,243...95,849,977 		JBrowse link
G Lin7c lin-7 homolog C, crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:96,406,800...96,417,779
Ensembl chr 3:96,406,813...96,417,728 		JBrowse link
G Mylk2 myosin light chain kinase 2 IMP Mlck controls the movemnet of synaptic vesicles RGD PMID:15980175 RGD:1600508 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728 		JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP PMID:19628693 CACAO PMID:19628693 RGD:8554760 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
G Rab3a RAB3A, member RAS oncogene family involved_in IEA
ISO		 GO_REF:0000107
(PMID:11598194)		 Ensembl
RGD		 PMID:11598194 GO_REF:0000107 NCBI chr16:18,684,185...18,688,297
Ensembl chr16:18,684,188...18,688,336 		JBrowse link
G Snapin SNAP-associated protein involved_in ISO
IBA
IEA
ISS		 (PMID:18167355)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024		 RGD
GO_Central
Ensembl
UniProt		 PMID:18167355 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231 		JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO MGI:2389489 (PMID:12388586) RGD PMID:12388586 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
G Spg11 SPG11 vesicle trafficking associated, spatacsin involved_in ISO
IBA		 (PMID:24794856)
GO_REF:0000033		 RGD
GO_Central		 PMID:24794856 GO_REF:0000033 NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911 		JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO MGI:2179801 (PMID:10535736) RGD PMID:10535736 NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
G Tmem230 transmembrane protein 230 involved_in ISO
IBA
ISS		 (PMID:27270108)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:27270108 GO_REF:0000024 GO_REF:0000033 NCBI chr 3:119,473,109...119,497,617
Ensembl chr 3:119,480,735...119,497,614 		JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO		 GO_REF:0000024
(PMID:18167355)		 UniProt
RGD		 PMID:18167355 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691 		JBrowse link
anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:21998198)		 GO_Central
RGD		 PMID:21998198 GO_REF:0000033 NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935 		JBrowse link
G Ap3b2 adaptor related protein complex 3 subunit beta 2 involved_in ISO (PMID:21998198) RGD PMID:21998198 NCBI chr 1:135,412,580...135,445,191
Ensembl chr 1:135,412,580...135,445,191 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IBA
ISO		 GO_REF:0000033
(PMID:21998198)		 GO_Central
RGD		 PMID:21998198 GO_REF:0000033 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21998198)		 UniProt
Ensembl
RGD		 PMID:21998198 GO_REF:0000024 GO_REF:0000107 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844 		JBrowse link
G Ap3m2 adaptor related protein complex 3 subunit mu 2 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:21998198)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21998198 GO_REF:0000024 GO_REF:0000107 NCBI chr16:69,217,526...69,237,372
Ensembl chr16:69,217,633...69,235,431 		JBrowse link
G Ap3s1 adaptor related protein complex 3 subunit sigma 1 involved_in ISO (PMID:21998198) RGD PMID:21998198 NCBI chr18:39,462,728...39,531,622
Ensembl chr18:39,462,765...39,531,622 		JBrowse link
G Ap3s2 adaptor related protein complex 3 subunit sigma 2 involved_in ISO (PMID:21998198) RGD PMID:21998198 NCBI chr 1:133,818,825...133,859,269
Ensembl chr 1:133,818,825...133,859,322 		JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr 7:1,347,495...1,351,103
Ensembl chr 7:1,340,934...1,351,558 		JBrowse link
G Bloc1s2 biogenesis of lysosomal organelles complex-1, subunit 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr 1:243,024,611...243,031,749
Ensembl chr 1:243,024,614...243,031,653 		JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 involved_in ISO (PMID:21998198) RGD PMID:21998198 NCBI chr 1:79,155,873...79,158,247
Ensembl chr 1:79,155,693...79,158,505 		JBrowse link
G Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 involved_in ISO (PMID:21998198) RGD PMID:21998198 NCBI chr14:74,043,025...74,044,325
Ensembl chr14:74,043,015...74,044,531 		JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251 		JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308 		JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 involved_in ISS
ISO
IBA		 GO_REF:0000024
(PMID:21998198)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:21998198 GO_REF:0000024 GO_REF:0000033 NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661 		JBrowse link
G Kif1a kinesin family member 1A involved_in ISO (PMID:7539720) RGD PMID:7539720 NCBI chr 9:93,563,033...93,647,412
Ensembl chr 9:93,563,045...93,647,480 		JBrowse link
G Kif1b kinesin family member 1B involved_in ISS
ISO		 GO_REF:0000024
(PMID:11389829)		 UniProt
RGD		 PMID:11389829 GO_REF:0000024 NCBI chr 5:159,607,697...159,742,778
Ensembl chr 5:159,561,271...159,742,778 		JBrowse link
G Madd MAP-kinase activating death domain involved_in ISO (PMID:18849981) RGD PMID:18849981 NCBI chr 3:77,114,330...77,157,865
Ensembl chr 3:77,114,314...77,157,701 		JBrowse link
G Snapin SNAP-associated protein involved_in ISS
ISO		 GO_REF:0000024
(PMID:21998198)		 UniProt
RGD		 PMID:21998198 GO_REF:0000024 NCBI chr 2:175,971,575...175,974,164
Ensembl chr 2:175,971,257...175,974,231 		JBrowse link
G Trim46 tripartite motif-containing 46 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
(PMID:26671463)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:26671463 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141 		JBrowse link
negative regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnih2 cornichon family AMPA receptor auxiliary protein 2 involved_in IMP PMID:24094107 UniProt PMID:24094107 RGD:10400859 NCBI chr 1:202,399,416...202,405,110
Ensembl chr 1:202,399,419...202,405,089 		JBrowse link
positive regulation of anterograde synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Borcs5 BLOC-1 related complex subunit 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:167,458,640...167,543,556
Ensembl chr 4:167,473,177...167,540,993 		JBrowse link
G Map2 microtubule-associated protein 2 involved_in IMP PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809 		JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in IMP
IDA		 PMID:28111082 SynGO PMID:28111082 PMID:28111082 RGD:13702195, RGD:13702195 NCBI chr10:54,666,015...54,671,581
Ensembl chr10:54,666,015...54,671,565 		JBrowse link
regulation of synaptic vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21307259) RGD PMID:21307259 NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:18842885 RGD:8554167 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557 		JBrowse link
synaptic vesicle budding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf1 ARF GTPase 1 IMP RGD PMID:9590176 RGD:9684955 NCBI chr10:43,997,983...44,014,461
Ensembl chr10:43,997,986...44,014,434 		JBrowse link
synaptic vesicle budding from endosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in IDA
IMP		 PMID:22539861 SynGO PMID:22539861 PMID:22539861 RGD:12050120, RGD:12050120 NCBI chr19:37,744,633...37,831,134
Ensembl chr19:37,744,633...37,829,167 		JBrowse link
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 involved_in ISO (PMID:20203623) RGD PMID:20203623 NCBI chr  X:30,572,746...30,598,961
Ensembl chr  X:30,572,751...30,597,262 		JBrowse link
G Ap3d1 adaptor related protein complex 3 subunit delta 1 involved_in IDA
ISO
IBA
IMP		 PMID:22539861
(PMID:11588176)
GO_REF:0000033		 RGD
GO_Central		 PMID:11588176 PMID:22539861 PMID:22539861 GO_REF:0000033, RGD:12050120, RGD:12050120 NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643 		JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (PMID:29262337) RGD PMID:29262337 NCBI chr14:2,265,187...2,338,426
Ensembl chr14:2,266,454...2,334,393 		JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538 		JBrowse link
G Dnm2 dynamin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157 		JBrowse link
G Dnm3 dynamin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557 		JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367 		JBrowse link
synaptic vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cltb clathrin, light chain B involved_in NAS PMID:3563513 UniProt PMID:3563513 RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20069
    cellular process 19150
      synaptic vesicle transport 51
        negative regulation of synaptic vesicle transport + 1
        positive regulation of synaptic vesicle transport + 2
        regulation of synaptic vesicle transport + 5
        synaptic vesicle budding + 12
        synaptic vesicle cytoskeletal transport + 22
Path 2
Term Annotations click to browse term
  biological_process 20069
    cellular process 19150
      cellular localization 3680
        establishment of localization in cell 2140
          establishment of vesicle localization 186
            synaptic vesicle transport 51
              negative regulation of synaptic vesicle transport + 1
              positive regulation of synaptic vesicle transport + 2
              regulation of synaptic vesicle transport + 5
              synaptic vesicle budding + 12
              synaptic vesicle cytoskeletal transport + 22
paths to the root