Synj1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
mRatBN7.2 | 11 | 30,192,629 - 30,269,447 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 30,192,629 - 30,269,220 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 11 | 38,879,383 - 38,956,048 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 11 | 31,550,808 - 31,627,473 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 11 | 30,725,282 - 30,801,896 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 11 | 31,105,784 - 31,181,573 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 31,104,787 - 31,180,642 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 34,717,258 - 34,792,366 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 30,921,834 - 30,998,609 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 11 | 30,921,975 - 30,966,053 (-) | NCBI | | | | | Celera | 11 | 29,860,879 - 29,935,097 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q11 | NCBI | | | | |
|
SYNJ1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 21 | 32,628,759 - 32,728,394 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 21 | 32,628,759 - 32,728,040 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 21 | 34,001,069 - 34,100,351 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 21 | 32,922,944 - 33,022,148 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 21 | 32,922,943 - 33,022,105 | NCBI | | | | | Celera | 21 | 19,184,699 - 19,284,009 (-) | NCBI | | Celera | | | Cytogenetic Map | 21 | q22.11 | NCBI | | | | | HuRef | 21 | 19,410,440 - 19,509,720 (-) | NCBI | | HuRef | | | CHM1_1 | 21 | 33,562,725 - 33,661,992 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 21 | 30,994,760 - 31,094,413 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Synj1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 16 | 90,732,980 - 90,810,543 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 90,732,980 - 90,808,196 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 90,936,092 - 91,013,727 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 90,936,092 - 91,011,308 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 90,936,342 - 91,011,553 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 90,824,951 - 90,900,361 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 92,017,943 - 92,093,156 (-) | NCBI | | Celera | | | Cytogenetic Map | 16 | C3.3 | NCBI | | | | | cM Map | 16 | 52.18 | NCBI | | | | |
|
Synj1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955407 | 32,093,479 - 32,175,795 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955407 | 32,094,076 - 32,175,676 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
SYNJ1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1 | 21 | 23,600,937 - 23,700,710 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 21 | 18,990,526 - 19,088,839 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 21 | 32,368,949 - 32,466,994 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 21 | 32,368,949 - 32,466,994 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
SYNJ1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 31 | 27,308,169 - 27,399,226 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 31 | 27,308,169 - 27,399,197 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 31 | 27,301,124 - 27,392,150 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 31 | 27,428,088 - 27,497,209 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 31 | 27,428,088 - 27,596,918 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 31 | 27,372,989 - 27,463,773 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 31 | 27,384,757 - 27,475,496 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 31 | 27,892,120 - 27,983,140 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
Synj1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404971 | 27,901,843 - 27,983,289 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936500 | 9,484,586 - 9,566,100 (+) | Ensembl | SpeTri2.0 | | | | SpeTri2.0 | NW_004936500 | 9,484,571 - 9,565,980 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
SYNJ1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 196,230,104 - 196,330,384 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 196,230,101 - 196,330,512 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 206,240,582 - 206,342,113 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
SYNJ1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 59,421,561 - 59,523,076 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 59,422,110 - 59,523,176 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666071 | 1,959,498 - 2,063,300 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Synj1 (Heterocephalus glaber - naked mole-rat) |
|