Humsd3_m QTL Report (Mus musculus) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: Humsd3_m (humerus midshaft diameter 3, 10 week (mouse)) Mus musculus

Symbol: Humsd3_m
Name: humerus midshaft diameter 3, 10 week (mouse)
RGD ID: 26884394
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391022,375,899 - 51,076,096MOUSEQTLGRCm39
GRCm381022,500,000 - 51,200,000MOUSEQTLGRCm38
cM Map10syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
PMID:27694627  



1 to 20 of 894 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
401717039LOC131376698STARR-seq mESC enhancer starr_26022102241966822420711Mouse
401703418LOC131376699STARR-seq mESC enhancer starr_26023102242410722425835Mouse
10040455Gm40612predicted gene, 40612102244669922489337Mouse
401703213LOC131376700STARR-seq mESC enhancer starr_26024102245821622460072Mouse
401701370LOC131376701STARR-seq mESC enhancer starr_26025102246990122471529Mouse
401707238LOC131376702STARR-seq mESC enhancer starr_26026102247294922474942Mouse
12794441Gm46216predicted gene, 46216102248116822485331Mouse
1617207Slc2a12solute carrier family 2 (facilitated glucose transporter), member 12102248882122579779Mouse
401709513LOC131376703STARR-seq mESC enhancer starr_26029102250759622509489Mouse
401707911LOC131376704STARR-seq mESC enhancer starr_26030102256589522568156Mouse
1315593Tbpl1TATA box binding protein-like 1102257977622607882Mouse
9666980Mir7663microRNA 7663102260527122605331Mouse
401713337LOC131376705STARR-seq mESC enhancer starr_26034102266164622664313Mouse
5143774Gm17794predicted gene, 17794102266721222668375Mouse
401711780LOC131376706STARR-seq mESC enhancer starr_26035102267873522680284Mouse
1624606Gm10824predicted gene 10824102268928022697841Mouse
1552041Tcf21transcription factor 21102269316222696042Mouse
15023021Gm51761predicted gene, 51761102270688122724571Mouse
12793526Gm46217predicted gene, 46217102272885422733425Mouse
401712310LOC131376707STARR-seq mESC enhancer starr_26037102285097422852720Mouse

1 to 20 of 894 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 67 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11532718Sluc44f_msusceptibility to lung cancer 44f (mouse)10126289265Mouse
11532717Sluc44g_msusceptibility to lung cancer 44g (mouse)10126289265Mouse
1300881Sluc29_msusceptibility to lung cancer 29 (mouse)Not determined10126289265Mouse
1302160Mbis2_mMycobacterium bovis-induced systemic lupus erythematosus 2 (mouse)Not determined102028318556031223Mouse
1300759Geot_mgeotaxia (mouse)Not determined10126289265Mouse
15039341Nmrs28_mNAFLD-associated magnetic resonance shift 28 (mouse)1035100134351001Mouse
1301659Arrd2_mage-related retinal degeneration 2 (mouse)Not determined102028318526890391Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
14697707Stsl2_mSalmonella typhimurium susceptibility locus 2 (mouse)104627609653876096Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse

1 to 10 of 67 rows


Database
Acc Id
Source(s)
MGD MGI:6405252 MouseQtl