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Gene: Col10a1 (collagen, type X, alpha 1) Mus musculus
Symbol: Col10a1
Name: collagen, type X, alpha 1
Description: Predicted to have extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Localizes to the cell cortex; collagen trimer; and extracellular matrix. Used to study Schmid metaphyseal chondrodysplasia. Human ortholog(s) of this gene implicated in Schmid metaphyseal chondrodysplasia and osteochondrodysplasia. Is expressed in several structures, including cartilage; limb; pelvic girdle musculature; and skeletal system. Orthologous to human COL10A1 (collagen type X alpha 1 chain); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; all-trans-retinoic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Col10; Col10a-1; collagen alpha-1(X) chain; procollagen, type X, alpha 1
Homo sapiens (human) : COL10A1 (collagen type X alpha 1 chain)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Col10a1 (collagen type X alpha 1 chain)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Col10a1 (collagen type X alpha 1 chain)
Pan paniscus (bonobo/pygmy chimpanzee) : COL10A1 (collagen type X alpha 1 chain)
Canis lupus familiaris (dog) : COL10A1 (collagen type X alpha 1 chain)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Col10a1 (collagen type X alpha 1 chain)
Sus scrofa (pig) : COL10A1 (collagen type X alpha 1 chain)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm381034,389,981 - 34,397,085 (+)NCBIGRCm38GRCm38mm10GRCm38
MGSCv371034,109,787 - 34,116,891 (+)NCBIGRCm37mm9NCBIm37
MGSCv361034,079,251 - 34,087,720 (+)NCBImm8
Celera1035,298,560 - 35,305,664 (+)NCBICelera
Cytogenetic Map10 B1NCBI
cM Map1018.85NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status



Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Col10a1
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735282
Created: 2004-02-06
Species: Mus musculus
Last Modified: 2019-11-13
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.