Tbpl1 (TATA box binding protein-like 1) - Rat Genome Database

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Gene: Tbpl1 (TATA box binding protein-like 1) Mus musculus
Analyze
Symbol: Tbpl1
Name: TATA box binding protein-like 1
RGD ID: 1315593
MGI Page MGI
Description: Predicted to enable RNA polymerase II core promoter sequence-specific DNA binding activity and RNA polymerase II general transcription initiation factor activity. Acts upstream of or within acrosome assembly; dTTP biosynthetic process; and spermatid nucleus differentiation. Located in cytoplasm and male germ cell nucleus. Part of transcription factor TFIIA complex. Is expressed in several structures, including central nervous system; early conceptus; ganglia; gonad; and sensory organ. Orthologous to human TBPL1 (TATA-box binding protein like 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 21 kDa TBP-like protein; 4732475G08; AW011832; AW491032; D18347; STD; T; TATA box binding protein-like protein; TATA box-binding protein-like 1; TATA box-binding protein-like protein 1; TATA box-binding protein-related factor 2; TBP-like 1; TBP-like factor; TBP-like protein 1; TBP-related factor 2; TBP-related protein; TL; TLF; Tlp; TRF; TRF2; TRP
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391022,579,776 - 22,607,890 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1022,579,778 - 22,607,837 (-)EnsemblGRCm39 Ensembl
GRCm381022,703,877 - 22,732,666 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1022,703,879 - 22,731,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv371022,423,683 - 22,451,253 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361022,393,295 - 22,420,794 (-)NCBIMGSCv36mm8
Celera1023,650,605 - 23,678,195 (-)NCBICelera
Cytogenetic Map10A3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse brain organization revealed through direct genome-scale TF expression analysis. Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. Fundamental cellular processes do not require vertebrate-specific sequences within the TATA-binding protein. Schmidt EE, etal., J Biol Chem 2003 Feb 21;278(8):6168-74. Epub 2002 Dec 5.
Additional References at PubMed
PMID:8889548   PMID:9889269   PMID:10224042   PMID:10349636   PMID:11042159   PMID:11051541   PMID:11076861   PMID:11352070   PMID:11463376   PMID:11472857   PMID:11861477   PMID:12062093  
PMID:12360237   PMID:12477932   PMID:14570910   PMID:14967955   PMID:15282163   PMID:15465484   PMID:15767669   PMID:15927180   PMID:16024815   PMID:16141072   PMID:16141073   PMID:16412700  
PMID:16602821   PMID:16765935   PMID:16847751   PMID:17085973   PMID:17234886   PMID:18287559   PMID:18418073   PMID:18625717   PMID:18722179   PMID:19515240   PMID:19741146   PMID:20046894  
PMID:20059953   PMID:20211142   PMID:20412781   PMID:21267068   PMID:21383078   PMID:21677750   PMID:21873635   PMID:27576952   PMID:27680312   PMID:27997827   PMID:30550785   PMID:31932482  
PMID:32968282  


Genomics

Comparative Map Data
Tbpl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391022,579,776 - 22,607,890 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1022,579,778 - 22,607,837 (-)EnsemblGRCm39 Ensembl
GRCm381022,703,877 - 22,732,666 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1022,703,879 - 22,731,938 (-)EnsemblGRCm38mm10GRCm38
MGSCv371022,423,683 - 22,451,253 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361022,393,295 - 22,420,794 (-)NCBIMGSCv36mm8
Celera1023,650,605 - 23,678,195 (-)NCBICelera
Cytogenetic Map10A3NCBI
TBPL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386133,952,174 - 133,990,432 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl6133,952,170 - 133,990,432 (+)EnsemblGRCh38hg38GRCh38
GRCh376134,273,312 - 134,311,570 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 366134,315,994 - 134,350,322 (+)NCBINCBI36Build 36hg18NCBI36
Build 346134,315,993 - 134,350,322NCBI
Celera6135,015,381 - 135,049,709 (+)NCBICelera
Cytogenetic Map6q23.2NCBI
HuRef6131,841,901 - 131,877,571 (+)NCBIHuRef
CHM1_16134,535,432 - 134,570,879 (+)NCBICHM1_1
T2T-CHM13v2.06135,140,198 - 135,178,439 (+)NCBIT2T-CHM13v2.0
Tbpl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2122,777,892 - 22,803,305 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl122,778,459 - 22,803,122 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl122,778,492 - 22,803,302 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx122,557,426 - 22,582,254 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0128,557,211 - 28,582,034 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0122,754,476 - 22,779,301 (+)NCBIRnor_WKY
Rnor_6.0123,977,154 - 24,002,512 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl123,977,688 - 24,002,506 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0125,441,466 - 25,466,751 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4123,295,515 - 23,320,298 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1123,298,484 - 23,322,895 (+)NCBI
Celera121,506,025 - 21,530,791 (+)NCBICelera
Cytogenetic Map1p12NCBI
Tbpl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554392,539,486 - 2,563,720 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554392,539,465 - 2,548,351 (-)NCBIChiLan1.0ChiLan1.0
TBPL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16135,817,603 - 135,852,876 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6135,817,613 - 135,852,876 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v06131,719,606 - 131,754,960 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
TBPL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1126,898,344 - 26,938,452 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl126,899,859 - 26,936,995 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha127,781,262 - 27,818,400 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0127,056,795 - 27,097,278 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl127,058,291 - 27,096,959 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1126,942,064 - 26,979,193 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0126,822,118 - 26,859,272 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0127,131,596 - 27,168,730 (+)NCBIUU_Cfam_GSD_1.0
Tbpl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946122,018,007 - 122,050,977 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365601,797,333 - 1,830,188 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365601,797,791 - 1,830,199 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TBPL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl129,899,850 - 29,936,680 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1129,899,956 - 29,936,773 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2133,403,547 - 33,440,366 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TBPL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11339,487,007 - 39,523,752 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1339,483,880 - 39,522,115 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604011,670,816 - 11,708,059 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tbpl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624942819,106 - 847,929 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624942819,099 - 848,240 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:907
Count of miRNA genes:484
Interacting mature miRNAs:566
Transcripts:ENSMUST00000095794, ENSMUST00000127698, ENSMUST00000138022, ENSMUST00000141569
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11532725Sluc44b_msusceptibility to lung cancer 44b (mouse)10126289265Mouse
11532724Sluc44c_msusceptibility to lung cancer 44c (mouse)10126289265Mouse
11532723Sluc44d_msusceptibility to lung cancer 44d (mouse)10126289265Mouse
11532722Sluc44e_msusceptibility to lung cancer 44e (mouse)10126289265Mouse
11532721Sluc44_msusceptibility to lung cancer 44 (mouse)10126289265Mouse
11532720Sluc44a_msusceptibility to lung cancer 44a (mouse)10126289265Mouse
11532718Sluc44f_msusceptibility to lung cancer 44f (mouse)10126289265Mouse
11532717Sluc44g_msusceptibility to lung cancer 44g (mouse)10126289265Mouse
11533917Mts2_mmammary tumor susceptibility 2 (mouse)10126289265Mouse
1300759Geot_mgeotaxia (mouse)Not determined10126289265Mouse
1300881Sluc29_msusceptibility to lung cancer 29 (mouse)Not determined10126289265Mouse
12879494Facq1_mfear acquisition QTL 1 (mouse)10131279130Mouse
15039341Nmrs28_mNAFLD-associated magnetic resonance shift 28 (mouse)1035100134351001Mouse
1357813Ath20_matherosclerosis 20 (mouse)Not determined10328318537283334Mouse
1300790Pgia6_mproteoglycan induced arthritis 6 (mouse)Not determined10381017137810295Mouse
1300997Eae15_msusceptibility to experimental allergic encephalomyelitis 15 (mouse)Not determined10440815438408276Mouse
13208561Wght8_mweight 8 (mouse)10495000043875996Mouse
1302092Ath11_matherosclerosis 11 (mouse)Not determined10615194558693521Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
1558865Lith21_mlithogenic gene 21 (mouse)Not determined10852500342525126Mouse
1301796Mop2_mmorphine preference 2 (mouse)Not determined10928911929028424Mouse
1301448Pas11_mpulmonary adenoma susceptibility 11 (mouse)Not determined10989026443890391Mouse
1301129Alcp15_malcohol preference locus 15 (mouse)Not determined10989026443890391Mouse
1302133Alcp16_malcohol preference locus 16 (mouse)Not determined10989026443890391Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
13208570Bmiq9_mbody mass index QTL 9 (mouse)101287574424875898Mouse
1558857Igan1_mIgA nephropathy 1 (mouse)Not determined101771831329704155Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
10755518Chol16_mcholesterol 16 (mouse)101891504352915043Mouse
1301659Arrd2_mage-related retinal degeneration 2 (mouse)Not determined102028318526890391Mouse
1302160Mbis2_mMycobacterium bovis-induced systemic lupus erythematosus 2 (mouse)Not determined102028318556031223Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
1301003Lmblgq4_mlimb length QTL 4 (mouse)Not determined102159119268091639Mouse
26884394Humsd3_mhumerus midshaft diameter 3, 10 week (mouse)102237589951076096Mouse

Markers in Region
AW491032  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381022,703,960 - 22,704,108UniSTSGRCm38
MGSCv371022,423,766 - 22,423,914UniSTSGRCm37
Celera1023,650,688 - 23,650,836UniSTS
Cytogenetic Map10A3UniSTS
Whitehead/MRC_RH10254.17UniSTS
Tbpl1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10A3UniSTS
cM Map10 UniSTS
D9Mit12  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38999,910,333 - 99,910,428UniSTSGRCm38
MGSCv37999,810,752 - 99,810,847UniSTSGRCm37
Celera999,440,703 - 99,440,786UniSTS
cM Map955.0UniSTS
Whitehead Genetic953.6UniSTS
AW011832  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381022,703,622 - 22,703,739UniSTSGRCm38
MGSCv371022,423,428 - 22,423,545UniSTSGRCm37
Celera1023,650,350 - 23,650,467UniSTS
Cytogenetic Map10A3UniSTS
Whitehead/MRC_RH10250.84UniSTS
Tbpl1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10A3UniSTS
cM Map10 UniSTS


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000095794   ⟹   ENSMUSP00000093470
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1022,581,280 - 22,607,837 (-)Ensembl
GRCm38.p6 Ensembl1022,705,381 - 22,731,938 (-)Ensembl
RefSeq Acc Id: ENSMUST00000127698   ⟹   ENSMUSP00000114223
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1022,579,778 - 22,607,346 (-)Ensembl
GRCm38.p6 Ensembl1022,703,879 - 22,731,447 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138022
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1022,587,680 - 22,607,260 (-)Ensembl
GRCm38.p6 Ensembl1022,711,781 - 22,731,361 (-)Ensembl
RefSeq Acc Id: ENSMUST00000141569
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1022,581,422 - 22,582,284 (-)Ensembl
GRCm38.p6 Ensembl1022,705,523 - 22,706,385 (-)Ensembl
RefSeq Acc Id: NM_011603   ⟹   NP_035733
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391022,579,776 - 22,607,346 (-)NCBI
GRCm381022,703,877 - 22,731,447 (-)NCBI
MGSCv371022,423,683 - 22,451,253 (-)RGD
Celera1023,650,605 - 23,678,195 (-)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006512730   ⟹   XP_006512793
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391022,579,776 - 22,607,890 (-)NCBI
GRCm381022,703,877 - 22,732,666 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036155771   ⟹   XP_036011664
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391022,579,776 - 22,607,621 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035733   ⟸   NM_011603
- UniProtKB: P62340 (UniProtKB/Swiss-Prot),   A0A6P7RFV6 (UniProtKB/TrEMBL),   A0A8C6HTE7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006512793   ⟸   XM_006512730
- Peptide Label: isoform X1
- UniProtKB: P62340 (UniProtKB/Swiss-Prot),   A0A6P7RFV6 (UniProtKB/TrEMBL),   A0A8C6HTE7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000114223   ⟸   ENSMUST00000127698
RefSeq Acc Id: ENSMUSP00000093470   ⟸   ENSMUST00000095794
RefSeq Acc Id: XP_036011664   ⟸   XM_036155771
- Peptide Label: isoform X2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P62340-F1-model_v2 AlphaFold P62340 1-186 view protein structure

Promoters
RGD ID:6819996
Promoter ID:MM_KWN:3722
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney
Transcripts:OTTMUST00000069842
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361022,425,861 - 22,426,361 (-)MPROMDB
RGD ID:6819995
Promoter ID:MM_KWN:3723
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000092668,   NM_011603,   OTTMUST00000069472,   OTTMUST00000069473,   UC007EPQ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361022,451,236 - 22,452,082 (-)MPROMDB
RGD ID:8671640
Promoter ID:EPDNEW_M13851
Type:initiation region
Name:Tbpl1_1
Description:Mus musculus TATA box binding protein-like 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13852  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381022,731,318 - 22,731,378EPDNEW
RGD ID:8671642
Promoter ID:EPDNEW_M13852
Type:initiation region
Name:Tbpl1_2
Description:Mus musculus TATA box binding protein-like 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13851  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381022,731,983 - 22,732,043EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1339946 AgrOrtholog
Ensembl Genes ENSMUSG00000071359 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000093470 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000114223 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000095794 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000127698 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.310.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro TBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TBP-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TBP_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:237336 UniProtKB/Swiss-Prot
MGD MGI:1339946 ENTREZGENE
NCBI Gene 237336 ENTREZGENE
PANTHER PTHR10126 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam TBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tbpl1 PhenoGen
PRINTS TIFACTORIID UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A6P7RFV6 ENTREZGENE
  A0A8C6HTE7 ENTREZGENE
  P62340 ENTREZGENE
  Q8K073_MOUSE UniProtKB/TrEMBL
  TBPL1_MOUSE UniProtKB/Swiss-Prot
UniProt Secondary O95753 UniProtKB/Swiss-Prot
  Q9Z2Z0 UniProtKB/Swiss-Prot