Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:olfactory lobe development
go back to main search page
Accession:GO:0021988 term browser browse the term
Definition:The progression of the olfactory lobe over time from its initial formation until its mature state. The olfactory lobe is the area of the brain that process the neural inputs for the sense of smell.


show annotations for term's descendants           Sort by:
olfactory lobe development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO MGI:5467393 (PMID:23090999) RGD PMID:23090999 NCBI chr 1:104,432,094...104,437,611 JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2675580 (PMID:12926013) RGD PMID:12926013 NCBI chr14:75,845,836...75,996,094 JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) acts_upstream_of_or_within ISO MGI:2683867 (PMID:12879062) RGD PMID:12879062 NCBI chr 8:58,348,448...58,370,536 JBrowse link
chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slit1 slit guidance ligand 1 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr 1:240,409,559...240,558,127 JBrowse link
G Slit2 slit guidance ligand 2 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr14:66,829,661...67,168,517 JBrowse link
G Slit3 slit guidance ligand 3 NOT|involved_in ISO (PMID:11748139) RGD PMID:11748139 NCBI chr10:20,075,929...20,660,704 JBrowse link
chemorepulsion involved in postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Robo1 roundabout guidance receptor 1 involved_in ISO (PMID:15207848) RGD PMID:15207848 NCBI chr11:24,067,869...25,108,694 JBrowse link
G Slit2 slit guidance ligand 2 involved_in ISO
IEA		 (PMID:15207848)
GO_REF:0000107		 RGD
Ensembl		 PMID:15207848 GO_REF:0000107 NCBI chr14:66,829,661...67,168,517 JBrowse link
embryonic olfactory bulb interneuron precursor migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arx aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2429693 (PMID:15677725)		 Ensembl
RGD		 PMID:15677725 GO_REF:0000107 NCBI chr  X:58,016,233...58,028,149 JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:1932522|MGI:2663662 (PMID:17409253) RGD PMID:17409253 NCBI chr12:16,150,411...16,170,864 JBrowse link
olfactory bulb development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in ISO (PMID:11884758) RGD PMID:11884758 NCBI chr17:5,120,540...5,238,874 JBrowse link
G Ak1 adenylate kinase 1 IEP RGD PMID:9920788 RGD:632499 NCBI chr 3:36,310,113...36,320,760 JBrowse link
G Ak3 adenylate kinase 3 IEP RGD PMID:9920788 RGD:632499 NCBI chr 1:236,151,012...236,178,689 JBrowse link
G Arx aristaless related homeobox acts_upstream_of_or_within ISO MGI:2429693 (PMID:15677725) RGD PMID:15677725 NCBI chr  X:58,016,233...58,028,149 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:3707678 (PMID:19279158) RGD PMID:19279158 NCBI chr 5:21,812,007...21,995,358 JBrowse link
G Crtac1 cartilage acidic protein 1 acts_upstream_of_or_within ISO (PMID:21817055) RGD PMID:21817055 NCBI chr 1:241,091,679...241,233,677 JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in IEA
ISO		 GO_REF:0000107
(PMID:22542597)		 Ensembl
RGD		 PMID:22542597 GO_REF:0000107 NCBI chr18:56,834,152...56,860,804 JBrowse link
G Dlx2 distal-less homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857828 (PMID:7590232)		 Ensembl
RGD		 PMID:7590232 GO_REF:0000107 NCBI chr 3:56,370,238...56,373,581 JBrowse link
G Dpysl2 dihydropyrimidinase-like 2 IEP RGD PMID:14751288 RGD:2316247 NCBI chr15:45,181,041...45,287,065 JBrowse link
G Efna2 ephrin A2 IEP RGD PMID:12234653 RGD:634733 NCBI chr 7:9,515,635...9,528,071 JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEP RGD PMID:18565716 RGD:13204724 NCBI chr 1:22,518,051...22,583,044 JBrowse link
G Eomes eomesodermin acts_upstream_of_or_within ISO MGI:3774027 (PMID:19435790) RGD PMID:19435790 NCBI chr 8:127,059,215...127,067,070 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2682061 (PMID:14605369) RGD PMID:14605369 NCBI chr 7:86,265,651...86,544,488 JBrowse link
G Fezf1 Fez family zinc finger 1 acts_upstream_of_or_within ISO MGI:3626294 (PMID:16971467) RGD PMID:16971467 NCBI chr 4:51,762,751...51,766,078 JBrowse link
G Fut1 fucosyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16884711)		 UniProt
RGD		 PMID:16884711 GO_REF:0000024 NCBI chr 1:96,086,934...96,090,352 JBrowse link
G Gsx2 GS homeobox 2 involved_in ISO MGI:4412067 (PMID:28814342) RGD PMID:28814342 NCBI chr14:33,123,799...33,126,151 JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:3830733 (PMID:19109490) RGD PMID:19109490 NCBI chr 6:47,469,162...47,470,995 JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:23308235), (PMID:24931760) RGD PMID:23308235 PMID:24931760 NCBI chr13:50,478,646...50,542,256 JBrowse link
G Lhx2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:4399044 (PMID:19820705)		 Ensembl
RGD		 PMID:19820705 GO_REF:0000107 NCBI chr 3:22,113,619...22,143,909 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21168496) RGD PMID:21168496 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Mecp2 methyl CpG binding protein 2 IEP RGD PMID:12605461 RGD:12790706 NCBI chr  X:156,932,481...156,995,981 JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3802571 (PMID:25331604) RGD PMID:25331604 NCBI chr19:23,355,388...23,450,360 JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within ISO MGI:2151350|MGI:2176490 (PMID:11997145), (PMID:12527005) RGD PMID:11997145 PMID:12527005 NCBI chr20:46,050,134...46,071,257 JBrowse link
G Pax6 paired box 6 IMP RGD PMID:14736749 RGD:8552333 NCBI chr 3:92,128,772...92,157,022 JBrowse link
G Pcnt pericentrin acts_upstream_of_or_within ISO MGI:3799303 (PMID:20096683) RGD PMID:20096683 NCBI chr20:12,190,597...12,278,723 JBrowse link
G Rpgrip1l Rpgrip1-like acts_upstream_of_or_within ISO MGI:3716208 (PMID:17558409) RGD PMID:17558409 NCBI chr19:31,865,050...31,957,930 JBrowse link
G Sall1 spalt-like transcription factor 1 acts_upstream_of_or_within ISO MGI:2388379 (PMID:18024993) RGD PMID:18024993 NCBI chr19:34,179,316...34,196,278 JBrowse link
G Sema3a semaphorin 3A involved_in ISO
ISS		 (PMID:22416012)
GO_REF:0000024		 RGD
UniProt		 PMID:22416012 GO_REF:0000024 NCBI chr 4:21,282,398...21,754,834 JBrowse link
G Ski Ski proto-oncogene acts_upstream_of_or_within ISO MGI:2177555 (PMID:11731796) RGD PMID:11731796 NCBI chr 5:170,995,851...171,064,957 JBrowse link
G Slit1 slit guidance ligand 1 acts_upstream_of_or_within ISO MGI:1315205 (PMID:12097499) RGD PMID:12097499 NCBI chr 1:240,409,559...240,558,127 JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315203 (PMID:12097499) RGD PMID:12097499 NCBI chr14:66,829,661...67,168,517 JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (PMID:21646512) RGD PMID:21646512 NCBI chr 6:118,198,186...118,252,422 JBrowse link
G Zic1 Zic family member 1 involved_in ISO MGI:106676 (PMID:17507568) RGD PMID:17507568 NCBI chr 8:100,785,282...100,797,716 JBrowse link
G Zic3 Zic family member 3 involved_in ISO MGI:106683 (PMID:17507568), (PMID:28814342) RGD PMID:17507568 PMID:28814342 NCBI chr  X:136,123,662...136,129,627 JBrowse link
olfactory bulb interneuron development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5467393 (PMID:23090999)		 Ensembl
RGD		 PMID:23090999 GO_REF:0000107 NCBI chr 1:104,432,094...104,437,611 JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO UniProtKB:Q7TPD3 (PMID:17360927) RGD PMID:17360927 NCBI chr11:24,067,869...25,108,694 JBrowse link
G Robo2 roundabout guidance receptor 2 involved_in ISO (PMID:17360927) RGD PMID:17360927 NCBI chr11:26,015,919...27,583,750 JBrowse link
G Sall3 spalt-like transcription factor 3 acts_upstream_of_or_within ISO MGI:3052730 (PMID:18260139) RGD PMID:18260139 NCBI chr18:74,406,066...74,425,974 JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO		 GO_REF:0000107
(PMID:21539518)		 Ensembl
RGD		 PMID:21539518 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860 JBrowse link
olfactory bulb interneuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf5 activating transcription factor 5 acts_upstream_of_or_within ISO MGI:5467393 (PMID:23090999) RGD PMID:23090999 NCBI chr 1:104,432,094...104,437,611 JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of_or_within ISO (PMID:18184563) RGD PMID:18184563 NCBI chr 6:123,627,529...123,692,278 JBrowse link
G Dlx5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180475 (PMID:25937343)		 Ensembl
RGD		 PMID:25937343 GO_REF:0000107 NCBI chr 4:35,965,579...35,969,973 JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15543145)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15543145 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:76,973,386...78,045,633 JBrowse link
G Gsx2 GS homeobox 2 acts_upstream_of_or_within ISO MGI:2150162 (PMID:11060228) RGD PMID:11060228 NCBI chr14:33,123,799...33,126,151 JBrowse link
G Mir200a microRNA 200a acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:171,930,717...171,930,805 JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 5:171,931,495...171,931,589 JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of_or_within ISO (PMID:25937343) RGD PMID:25937343 NCBI chr 1:142,849,400...142,849,489 JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:18024993) RGD PMID:18024993 NCBI chr19:34,179,316...34,196,278 JBrowse link
G Uncx UNC homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1928812 (PMID:20692344)		 Ensembl
RGD		 PMID:20692344 GO_REF:0000107 NCBI chr12:15,092,779...15,097,300 JBrowse link
olfactory bulb mitral cell layer development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:16901643)		 Ensembl
RGD		 PMID:16901643 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479 JBrowse link
G Pax6 paired box 6 IMP RGD PMID:14736749 RGD:8552333 NCBI chr 3:92,128,772...92,157,022 JBrowse link
G Sall1 spalt-like transcription factor 1 involved_in ISO (PMID:18024993) RGD PMID:18024993 NCBI chr19:34,179,316...34,196,278 JBrowse link
olfactory cortex development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO (PMID:12805306) RGD PMID:12805306 NCBI chr13:84,729,597...84,754,544 JBrowse link
postnatal olfactory bulb interneuron migration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:73,194,631...73,249,855 JBrowse link
tangential migration from the subventricular zone to the olfactory bulb term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:20083104 RGD:2325172 NCBI chr16:73,194,631...73,249,855 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (PMID:21168496) RGD PMID:21168496 NCBI chr 7:124,706,246...124,867,234 JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in IEA
ISO		 GO_REF:0000107
(PMID:16901643)		 Ensembl
RGD		 PMID:16901643 GO_REF:0000107 NCBI chr14:81,150,021...81,217,479 JBrowse link
G Slit1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2179459 (PMID:14960623)		 Ensembl
RGD		 PMID:14960623 GO_REF:0000107 NCBI chr 1:240,409,559...240,558,127 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2181426|MGI:2385464 (PMID:15837932) RGD PMID:15837932 NCBI chr 9:21,924,050...21,933,338 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure development 6609
        olfactory lobe development 55
          olfactory bulb development + 52
          olfactory cortex development 1
Path 2
Term Annotations click to browse term
  biological_process 20534
    developmental process 7107
      anatomical structure development 6609
        multicellular organism development 5329
          system development 4611
            nervous system development 2862
              central nervous system development 1216
                brain development 903
                  forebrain development 559
                    telencephalon development 386
                      olfactory lobe development 55
                        olfactory bulb development + 52
                        olfactory cortex development 1
paths to the root