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ONTOLOGY REPORT - ANNOTATIONS

Term:cortical cytoskeleton organization
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Accession:GO:0030865 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.
Synonyms:exact_synonym: cortical cytoskeleton organisation
 related_synonym: cortical cytoskeleton organization and biogenesis


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cortical cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3c protein phosphatase 2, regulatory subunit B'', gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:72,647,025...72,670,885
Ensembl chr 6:72,647,025...72,672,491 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO		 GO_REF:0000024
(MGI:3583523|PMID:12960403)		 UniProt
RGD		 PMID:12960403 GO_REF:0000024 MGI:3583523 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Rac3 Rac family small GTPase 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260 		JBrowse link
G Rhog ras homolog family member G involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:156,618,713...156,630,710
Ensembl chr 1:156,615,349...156,631,257 		JBrowse link
G Septin7 septin 7 acts_upstream_of_or_within ISO (PMID:22232702) RGD PMID:22232702 NCBI chr 8:23,719,448...23,783,247
Ensembl chr 8:23,716,030...23,783,243 		JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO (MGI:3784948|PMID:17515402) RGD PMID:17515402 MGI:3784948 NCBI chr14:72,258,032...72,291,768
Ensembl chr14:72,257,956...72,291,766 		JBrowse link
actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anln anillin, actin binding protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:20,858,227...20,921,602
Ensembl chr 8:20,858,228...20,921,538 		JBrowse link
G Anlnl1 anillin, actin binding protein-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:57,985,340...57,995,824
Ensembl chr17:57,986,511...57,989,997 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5819325|PMID:27336173)		 UniProt
Ensembl
RGD		 PMID:27336173 GO_REF:0000024 GO_REF:0000107 MGI:5819325 NCBI chr 8:113,590,998...113,646,795
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Racgap1 Rac GTPase-activating protein 1 involved_in ISO (PMID:16129829) RGD PMID:16129829 NCBI chr 7:130,750,936...130,780,891
Ensembl chr 7:130,750,936...130,780,831 		JBrowse link
G Rtkn rhotekin involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:115,640,813...115,657,952
Ensembl chr 4:115,640,774...115,657,952 		JBrowse link
actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plec plectin involved_in IEA
ISO		 GO_REF:0000107
MGI:3721885 (PMID:26519478)		 Ensembl
RGD		 PMID:26519478 GO_REF:0000107 NCBI chr 7:107,887,764...107,949,100
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
cortical actin cytoskeleton organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap11 A-kinase anchoring protein 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5751858 (PMID:27402760)		 Ensembl
RGD		 PMID:27402760 GO_REF:0000107 NCBI chr15:53,911,635...53,956,138
Ensembl chr15:53,911,657...53,941,605 		JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in ISO (PMID:10036235), (PMID:10913182) RGD PMID:10036235 PMID:10913182 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114 		JBrowse link
G Calr calreticulin acts_upstream_of_or_within ISO (PMID:15136153) RGD PMID:15136153 NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414 		JBrowse link
G Cavin3 caveolae associated protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:5518819 (PMID:24069528)		 Ensembl
RGD		 PMID:24069528 GO_REF:0000107 NCBI chr 1:159,826,549...159,828,138
Ensembl chr 1:159,826,549...159,828,161 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 IMP RGD PMID:15331630 RGD:1598417 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:14699157)		 UniProt
Ensembl
RGD		 PMID:14699157 GO_REF:0000024 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Ehd2 EH-domain containing 2 acts_upstream_of_or_within ISO (PMID:15247266) RGD PMID:15247266 NCBI chr 1:76,639,568...76,658,747
Ensembl chr 1:76,637,482...76,658,783 		JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:144,110,010...144,264,037
Ensembl chr 5:144,111,906...144,237,821 		JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1-like 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:144,929,195...145,052,723
Ensembl chr 3:144,984,640...145,052,721 		JBrowse link
G Epb41l2 erythrocyte membrane protein band 4.1-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:19,863,010...20,037,795
Ensembl chr 1:19,863,009...20,037,721 		JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:109,056,178...109,260,607
Ensembl chr 9:109,016,113...109,260,607 		JBrowse link
G Fhod1 formin homology 2 domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:33,206,492...33,225,448
Ensembl chr19:33,206,492...33,225,356 		JBrowse link
G Fhod3 formin homology 2 domain containing 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:15,993,079...16,425,796
Ensembl chr18:15,993,324...16,425,796 		JBrowse link
G Fmnl1 formin-like 1 involved_in ISO
IBA		 (PMID:21834987)
GO_REF:0000033		 RGD
GO_Central		 PMID:21834987 GO_REF:0000033 NCBI chr10:88,115,876...88,143,342
Ensembl chr10:88,116,009...88,143,357 		JBrowse link
G Fmnl2 formin-like 2 involved_in ISO
IBA		 (PMID:21834987)
GO_REF:0000033		 RGD
GO_Central		 PMID:21834987 GO_REF:0000033 NCBI chr 3:37,348,791...37,624,746
Ensembl chr 3:37,348,574...37,624,754 		JBrowse link
G Fmnl3 formin-like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:130,454,270...130,505,626
Ensembl chr 7:130,454,275...130,505,626 		JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO
IEA		 (PMID:25816133)
GO_REF:0000107		 RGD
Ensembl		 PMID:25816133 GO_REF:0000107 NCBI chr16:69,319,487...69,373,251
Ensembl chr16:69,319,554...69,373,250 		JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 involved_in ISO
ISS		 (PMID:26997484)
GO_REF:0000024		 RGD
UniProt		 PMID:26997484 GO_REF:0000024 NCBI chr 1:95,080,960...95,095,165
Ensembl chr 1:95,080,960...95,095,160 		JBrowse link
G Llgl1 LLGL scribble cell polarity complex component 1 involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
(PMID:7542763)		 Ensembl
GO_Central
RGD		 PMID:7542763 GO_REF:0000033 GO_REF:0000107 NCBI chr10:45,379,423...45,394,096
Ensembl chr10:45,379,515...45,394,094 		JBrowse link
G Llgl2 LLGL scribble cell polarity complex component 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:101,050,978...101,086,527
Ensembl chr10:101,051,408...101,086,525 		JBrowse link
G Nckap1 NCK-associated protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:65,417,450...65,491,769
Ensembl chr 3:65,417,453...65,492,217 		JBrowse link
G Nckap1l NCK associated protein 1 like involved_in ISS
IBA
ISO		 GO_REF:0000024
GO_REF:0000033
(PMID:16417406), (PMID:32647003)
(MGI:5502518|PMID:23424621)		 UniProt
GO_Central
RGD		 PMID:16417406 PMID:23424621 PMID:32647003 GO_REF:0000024 GO_REF:0000033 MGI:5502518 NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934 		JBrowse link
G Plek pleckstrin involved_in ISO (PMID:10497244) RGD PMID:10497244 NCBI chr14:91,397,015...91,429,693
Ensembl chr14:91,397,019...91,454,131 		JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in IMP PMID:23419316 UniProt PMID:23419316 RGD:8554106 NCBI chr 2:175,674,894...175,680,043
Ensembl chr 2:175,675,005...175,680,036 		JBrowse link
G Rhoq ras homolog family member Q involved_in ISO
IBA		 (PMID:11821390)
GO_REF:0000033
(MGI:2178001|PMID:11821390)		 RGD
GO_Central		 PMID:11821390 GO_REF:0000033 MGI:2178001 NCBI chr 6:7,613,632...7,652,047 JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
IBA
ISO		 GO_REF:0000107
GO_REF:0000033
UniProtKB:O75116 (PMID:25816133)		 Ensembl
GO_Central
RGD		 PMID:25816133 GO_REF:0000033 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO
IBA
IEA		 UniProtKB:Q13464 (PMID:25816133)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:25816133 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Strip1 striatin interacting protein 1 involved_in ISO (PMID:21834987) RGD PMID:21834987 NCBI chr 2:195,248,384...195,268,330
Ensembl chr 2:195,248,386...195,268,481 		JBrowse link
G Tln1 talin 1 acts_upstream_of_or_within ISO (PMID:12867986) RGD PMID:12867986 NCBI chr 5:57,787,670...57,817,900
Ensembl chr 5:57,787,943...57,817,900 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
cortical microtubule organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA		 (PMID:20551903)
GO_REF:0000107		 RGD
Ensembl		 PMID:20551903 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Ezr ezrin involved_in ISO
IEA		 (PMID:20551903)
GO_REF:0000107		 RGD
Ensembl		 PMID:20551903 GO_REF:0000107 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Pafah1b1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 involved_in ISO (MGI:5293247|PMID:21844209) RGD PMID:21844209 MGI:5293247 NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808 		JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in IDA PMID:20657843 BHF-UCL PMID:20657843 RGD:8553293 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517 		JBrowse link
cytoskeletal matrix organization at active zone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlgn1 neuroligin 1 involved_in IMP
ISO
IEA		 PMID:19628693
(MGI:4355770|PMID:19628693)
GO_REF:0000107		 RGD
Ensembl		 PMID:19628693 PMID:19628693 GO_REF:0000107 MGI:4355770, RGD:8554760 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464 		JBrowse link
mitotic actomyosin contractile ring assembly actin filament organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iqgap1 IQ motif containing GTPase activating protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:134,679,581...134,769,776
Ensembl chr 1:134,679,586...134,769,755 		JBrowse link
G Iqgap2 IQ motif containing GTPase activating protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:26,894,836...27,170,270
Ensembl chr 2:26,894,825...27,170,279 		JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:173,542,151...173,583,956
Ensembl chr 2:173,542,110...173,583,956 		JBrowse link
regulation of cytokinesis, actomyosin contractile ring assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ect2 epithelial cell transforming 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911 		JBrowse link
terminal web assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ezr ezrin involved_in ISO
IEA		 UniProtKB:Q3V0K9|UniProtKB:Q62468 (MGI:5621262|PMID:22114352)
GO_REF:0000107		 RGD
Ensembl		 PMID:22114352 GO_REF:0000107 MGI:5621262 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505 		JBrowse link
G Pls1 plastin 1 involved_in
acts_upstream_of_or_within		 ISO UniProtKB:P26040|UniProtKB:Q62468 (MGI:5621262|PMID:22114352)
MGI:5609592 (PMID:19321664)		 RGD PMID:19321664 PMID:22114352 MGI:5621262 NCBI chr 8:96,316,703...96,426,592
Ensembl chr 8:96,317,849...96,385,195 		JBrowse link
G Vil1 villin 1 involved_in ISO UniProtKB:P26040|UniProtKB:Q3V0K9 (MGI:5621262|PMID:22114352) RGD PMID:22114352 MGI:5621262 NCBI chr 9:75,991,141...76,018,860
Ensembl chr 9:75,991,141...76,018,858 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    cellular process 18195
      cellular component organization or biogenesis 6958
        cellular component organization 6699
          organelle organization 3689
            cytoskeleton organization 1530
              cortical cytoskeleton organization 53
                cortical actin cytoskeleton organization + 43
                cortical microtubule organization 4
                cytoskeletal matrix organization at active zone 1
paths to the root