Epb41 (erythrocyte membrane protein band 4.1) - Rat Genome Database

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Gene: Epb41 (erythrocyte membrane protein band 4.1) Rattus norvegicus
Analyze
Symbol: Epb41
Name: erythrocyte membrane protein band 4.1
RGD ID: 1564762
Description: Exhibits actin binding activity and spectrin binding activity. Involved in protein-containing complex assembly. Localizes to cytoplasm; cytoplasmic side of plasma membrane; and postsynaptic density. Orthologous to human EPB41 (erythrocyte membrane protein band 4.1); PARTICIPATES IN syndecan signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; atorvastatin calcium; bisphenol A.
Type: protein-coding
RefSeq Status: MODEL
Also known as: Epb4.1; erythrocyte protein band 4.1; LOC313052; protein 4.1; RGD1564762; similar to erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) isoform 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25144,110,010 - 144,264,037 (-)NCBI
Rnor_6.0 Ensembl5150,084,611 - 150,167,077 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.05150,081,727 - 150,243,186 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05153,760,449 - 153,919,840 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45150,782,245 - 150,908,888 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5142,553,286 - 142,705,904 (-)NCBICelera
Cytogenetic Map5q36NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:3693401   PMID:6894932   PMID:12477932   PMID:16060676   PMID:16254212   PMID:16669616   PMID:18723693   PMID:20109190   PMID:20585040   PMID:23460639   PMID:23870127  


Genomics

Comparative Map Data
Epb41
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25144,110,010 - 144,264,037 (-)NCBI
Rnor_6.0 Ensembl5150,084,611 - 150,167,077 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.05150,081,727 - 150,243,186 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05153,760,449 - 153,919,840 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45150,782,245 - 150,908,888 (-)NCBIRGSC3.4rn4RGSC3.4
Celera5142,553,286 - 142,705,904 (-)NCBICelera
Cytogenetic Map5q36NCBI
EPB41
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl128,887,091 - 29,120,046 (+)EnsemblGRCh38hg38GRCh38
GRCh38128,887,100 - 29,120,041 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37129,213,612 - 29,446,553 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36129,086,215 - 29,319,545 (+)NCBINCBI36hg18NCBI36
Celera127,609,687 - 27,842,706 (+)NCBI
Cytogenetic Map1p35.3NCBI
HuRef127,466,104 - 27,698,673 (+)NCBIHuRef
CHM1_1129,328,966 - 29,561,931 (+)NCBICHM1_1
Epb41
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394131,650,724 - 131,802,824 (-)NCBIGRCm39mm39
GRCm39 Ensembl4131,650,724 - 131,802,632 (-)Ensembl
GRCm384131,923,413 - 132,075,346 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4131,923,413 - 132,075,321 (-)EnsemblGRCm38mm10GRCm38
MGSCv374131,479,328 - 131,631,228 (-)NCBIGRCm37mm9NCBIm37
MGSCv364131,196,360 - 131,344,173 (-)NCBImm8
Celera4130,083,954 - 130,236,196 (-)NCBICelera
Cytogenetic Map4D2.3NCBI
cM Map464.54NCBI
Epb41
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554528,009,194 - 8,124,713 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554527,930,095 - 8,123,165 (+)NCBIChiLan1.0ChiLan1.0
EPB41
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1129,186,202 - 29,416,495 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl129,284,923 - 29,416,474 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0128,158,807 - 28,390,541 (+)NCBIMhudiblu_PPA_v0panPan3
EPB41
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1271,474,916 - 71,673,052 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl271,474,954 - 71,584,266 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha268,051,718 - 68,160,301 (-)NCBI
ROS_Cfam_1.0272,034,545 - 72,232,624 (-)NCBI
UMICH_Zoey_3.1268,864,384 - 68,973,060 (-)NCBI
UNSW_CanFamBas_1.0269,871,948 - 69,980,550 (-)NCBI
UU_Cfam_GSD_1.0270,869,968 - 70,978,583 (-)NCBI
Epb41
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505847,092,095 - 47,265,131 (+)NCBI
SpeTri2.0NW_00493647412,917,009 - 13,090,640 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EPB41
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl685,842,605 - 86,029,522 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1685,842,538 - 86,029,522 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2679,809,404 - 79,916,611 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EPB41
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120103,704,322 - 103,928,004 (-)NCBI
ChlSab1.1 Ensembl20103,699,694 - 103,927,730 (-)Ensembl
Vero_WHO_p1.0NW_02366603312,597,213 - 12,828,450 (+)NCBI
Epb41
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476412,692,114 - 12,896,252 (+)NCBI

Position Markers
RH142473  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,148,694 - 144,148,797 (+)MAPPER
Rnor_6.05150,120,661 - 150,120,763NCBIRnor6.0
Rnor_5.05153,799,383 - 153,799,485UniSTSRnor5.0
RGSC_v3.45150,819,153 - 150,819,255UniSTSRGSC3.4
Celera5142,591,965 - 142,592,067UniSTS
Cytogenetic Map5q36UniSTS
RH144386  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,135,928 - 144,136,036 (+)MAPPER
Rnor_6.05150,107,896 - 150,108,003NCBIRnor6.0
Rnor_5.05153,786,618 - 153,786,725UniSTSRnor5.0
RGSC_v3.45150,806,388 - 150,806,495UniSTSRGSC3.4
Celera5142,579,157 - 142,579,264UniSTS
RH 3.4 Map5978.6UniSTS
Cytogenetic Map5q36UniSTS
BE103841  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,129,694 - 144,129,891 (+)MAPPER
Rnor_6.05150,101,411 - 150,101,607NCBIRnor6.0
Rnor_5.05153,780,133 - 153,780,329UniSTSRnor5.0
RGSC_v3.45150,800,154 - 150,800,350UniSTSRGSC3.4
Celera5142,572,930 - 142,573,126UniSTS
RH 3.4 Map5978.4UniSTS
Cytogenetic Map5q36UniSTS
BF389762  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,144,449 - 144,144,661 (+)MAPPER
Rnor_6.05150,116,416 - 150,116,627NCBIRnor6.0
Rnor_5.05153,795,138 - 153,795,349UniSTSRnor5.0
RGSC_v3.45150,814,908 - 150,815,119UniSTSRGSC3.4
Celera5142,587,720 - 142,587,931UniSTS
RH 3.4 Map5964.8UniSTS
Cytogenetic Map5q36UniSTS
AW534429  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,258,748 - 144,258,911 (+)MAPPER
Rnor_6.05150,237,931 - 150,238,093NCBIRnor6.0
Rnor_5.05153,914,585 - 153,914,747UniSTSRnor5.0
RGSC_v3.45150,929,539 - 150,929,701UniSTSRGSC3.4
Celera5142,700,649 - 142,700,811UniSTS
RH 3.4 Map5966.3UniSTS
Cytogenetic Map5q36UniSTS
RH137416  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,126,782 - 144,126,983 (+)MAPPER
Rnor_6.05150,098,500 - 150,098,700NCBIRnor6.0
Rnor_5.05153,777,222 - 153,777,422UniSTSRnor5.0
RGSC_v3.45150,797,243 - 150,797,443UniSTSRGSC3.4
Celera5142,570,058 - 142,570,258UniSTS
RH 3.4 Map5978.4UniSTS
Cytogenetic Map5q36UniSTS
RH137604  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,123,781 - 144,123,921 (+)MAPPER
Rnor_6.05150,095,499 - 150,095,638NCBIRnor6.0
Rnor_5.05153,774,221 - 153,774,360UniSTSRnor5.0
RGSC_v3.45150,794,242 - 150,794,381UniSTSRGSC3.4
Celera5142,567,057 - 142,567,196UniSTS
Cytogenetic Map5q36UniSTS
RH140190  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,139,146 - 144,139,324 (+)MAPPER
Rnor_6.05150,111,113 - 150,111,290NCBIRnor6.0
Rnor_5.05153,789,835 - 153,790,012UniSTSRnor5.0
RGSC_v3.45150,809,605 - 150,809,782UniSTSRGSC3.4
Celera5142,582,417 - 142,582,594UniSTS
Cytogenetic Map5q36UniSTS
AI229184  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,110,307 - 144,110,501 (+)MAPPER
Rnor_6.05150,082,025 - 150,082,218NCBIRnor6.0
Rnor_5.05153,760,747 - 153,760,940UniSTSRnor5.0
RGSC_v3.45150,780,768 - 150,780,961UniSTSRGSC3.4
Celera5142,553,584 - 142,553,777UniSTS
RH 3.4 Map5988.6UniSTS
Cytogenetic Map5q36UniSTS
BM387491  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.25144,133,104 - 144,133,304 (+)MAPPER
Rnor_6.05150,104,821 - 150,105,020NCBIRnor6.0
Rnor_5.05153,783,543 - 153,783,742UniSTSRnor5.0
RGSC_v3.45150,803,564 - 150,803,763UniSTSRGSC3.4
Celera5142,576,340 - 142,576,539UniSTS
RH 3.4 Map5989.9UniSTS
Cytogenetic Map5q36UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540777918154732375Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)547745646167946134Rat
61393Bp7Blood pressure QTL 74.50.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)561612600168109659Rat
1354598Srn6Serum renin concentration QTL 63.8blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)571552569157225114Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)584963058173504662Rat
1331796Thshl2Thyroid stimulating hormone level QTL 22.3blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)5100723739153577831Rat
1358187Emca1Estrogen-induced mammary cancer QTL 14.4mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)5102945579154732228Rat
1578673Bmd13Bone mineral density QTL 134.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)5107119214152119214Rat
2317056Wbc3White blood cell count QTL 32.510.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)5111278451156278451Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5112279412157279412Rat
7207481Bss106Bone structure and strength QTL 1067.9femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5112279412157279412Rat
7207486Bss109Bone structure and strength QTL 109femur strength trait (VT:0010010)femur total energy absorbed before break (CMO:0001677)5112279412157279412Rat
7207488Bss110Bone structure and strength QTL 18.4femur strength trait (VT:0010010)femur stiffness (CMO:0001674)5112279412157279412Rat
7207491Bss112Bone structure and strength QTL 1127femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)5112279412157279412Rat
1298089Scl14Serum cholesterol level QTL 145.80.0004blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)5114140832159140832Rat
1598847Cm62Cardiac mass QTL 623.4heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5114140832159140832Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5116767924161767924Rat
8694198Abfw3Abdominal fat weight QTL 316.130.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)5116767924161767924Rat
8694389Bw160Body weight QTL 1606.170.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)5116767924161767924Rat
8694441Bw169Body weight QTL 16917.610.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)5116767924161767924Rat
2293642Bss37Bone structure and strength QTL 374.640.0001femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)5125455818157225114Rat
1641920Colcs1Colorectal carcinoma susceptibility QTL 12.990.0055intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)5128687766173687766Rat
10053720Scort26Serum corticosterone level QTL 262.060.0147blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)5131077716173707219Rat
724525Bp147Blood pressure QTL 1474.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5132551937173707219Rat
1598819Bp292Blood pressure QTL 2924.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5133943857173707219Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5133943857173707219Rat
634349Bp139Blood pressure QTL 1390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5134197905173707219Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5134502140157212422Rat
8552908Pigfal4Plasma insulin-like growth factor 1 level QTL 46.6blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5134712342173707219Rat
8694169Bw148Body weight QTL 14850.001body mass (VT:0001259)body weight gain (CMO:0000420)5134712342173707219Rat
738018Anxrr4Anxiety related response QTL 45.1exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)5136354114173707219Rat
7794791Mcs33Mammary carcinoma susceptibility QTL 331.93mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)5136640731173707219Rat
631505Bp103Blood pressure QTL 1033.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)5138154677172402610Rat
631562Apr2Acute phase response QTL 23.7blood murinoglobulin 1 amount (VT:0010597)plasma murinoglobulin 1 level (CMO:0001931)5142307322173707219Rat
61444Strs2Sensitivity to stroke QTL 24.7cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)5142309061173707219Rat
1331721Bp210Blood pressure QTL 2103.413arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)5149029982173687766Rat
2302369Scl60Serum cholesterol level QTL 603.13blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)5149568588167739697Rat
631263Cm24Cardiac mass QTL 243.5heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)5149832180164807402Rat

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:932
Count of miRNA genes:166
Interacting mature miRNAs:203
Transcripts:ENSRNOT00000013761, ENSRNOT00000051097, ENSRNOT00000067189, ENSRNOT00000067349
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 43 57 41 19 41 8 11 72 35 34 11 8
Low 2 7
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_001063302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006239087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006239093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006239095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017593843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017603113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111260 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039111267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_232771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide BC103731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JACYVU010000162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSRNOT00000013761   ⟹   ENSRNOP00000013761
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5150,084,611 - 150,167,077 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000051097   ⟹   ENSRNOP00000046109
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5150,084,611 - 150,167,077 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000067189   ⟹   ENSRNOP00000059520
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5150,084,611 - 150,167,077 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000067349   ⟹   ENSRNOP00000061387
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5150,084,611 - 150,167,077 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000079935   ⟹   ENSRNOP00000075428
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5150,084,611 - 150,163,395 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000088493   ⟹   ENSRNOP00000071712
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl5150,084,611 - 150,167,077 (-)Ensembl
RefSeq Acc Id: XM_001063302   ⟹   XP_001063302
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,680,060 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006225547   ⟹   XP_006225609
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,703,333 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006225553   ⟹   XP_006225615
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,680,060 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006225555   ⟹   XP_006225617
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,705,904 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006239087   ⟹   XP_006239149
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,264,037 (-)NCBI
Rnor_6.05150,081,727 - 150,240,615 (-)NCBI
Rnor_5.05153,760,449 - 153,919,840 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006239093   ⟹   XP_006239155
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,237,959 (-)NCBI
Rnor_6.05150,081,727 - 150,217,560 (-)NCBI
Rnor_5.05153,760,449 - 153,919,840 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006239095   ⟹   XP_006239157
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,264,036 (-)NCBI
Rnor_6.05150,081,727 - 150,243,186 (-)NCBI
Rnor_5.05153,760,449 - 153,919,840 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593826   ⟹   XP_017449315
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593827   ⟹   XP_017449316
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593828   ⟹   XP_017449317
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593829   ⟹   XP_017449318
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593830   ⟹   XP_017449319
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593831   ⟹   XP_017449320
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593832   ⟹   XP_017449321
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593833   ⟹   XP_017449322
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593834   ⟹   XP_017449323
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593835   ⟹   XP_017449324
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593836   ⟹   XP_017449325
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593837   ⟹   XP_017449326
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593838   ⟹   XP_017449327
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593839   ⟹   XP_017449328
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593840   ⟹   XP_017449329
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05150,110,537 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593841   ⟹   XP_017449330
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
Rnor_6.05150,110,537 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593842   ⟹   XP_017449331
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017593843   ⟹   XP_017449332
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
Rnor_6.05150,081,727 - 150,167,083 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603096   ⟹   XP_017458585
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603097   ⟹   XP_017458586
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603098   ⟹   XP_017458587
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603099   ⟹   XP_017458588
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603100   ⟹   XP_017458589
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603101   ⟹   XP_017458590
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603102   ⟹   XP_017458591
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603103   ⟹   XP_017458592
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603104   ⟹   XP_017458593
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603105   ⟹   XP_017458594
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603106   ⟹   XP_017458595
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603107   ⟹   XP_017458596
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603108   ⟹   XP_017458597
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603109   ⟹   XP_017458598
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603110   ⟹   XP_017458599
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,582,457 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603111   ⟹   XP_017458600
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,582,457 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603112   ⟹   XP_017458601
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017603113   ⟹   XP_017458602
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Celera5142,553,286 - 142,637,881 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039111257   ⟹   XP_038967185
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,206,464 (-)NCBI
RefSeq Acc Id: XM_039111259   ⟹   XP_038967187
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111260   ⟹   XP_038967188
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111261   ⟹   XP_038967189
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111262   ⟹   XP_038967190
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111263   ⟹   XP_038967191
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111264   ⟹   XP_038967192
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111265   ⟹   XP_038967193
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111266   ⟹   XP_038967194
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_039111267   ⟹   XP_038967195
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,139,187 - 144,194,729 (-)NCBI
RefSeq Acc Id: XM_232771   ⟹   XP_232771
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.25144,110,010 - 144,237,948 (-)NCBI
Rnor_6.05150,081,727 - 150,217,560 (-)NCBI
Rnor_5.05153,760,449 - 153,919,840 (-)NCBI
RGSC_v3.45150,782,245 - 150,908,888 (-)RGD
Sequence:
Protein Sequences
Protein RefSeqs XP_006239149 (Get FASTA)   NCBI Sequence Viewer  
  XP_006239155 (Get FASTA)   NCBI Sequence Viewer  
  XP_006239157 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449315 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449316 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449317 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449318 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449319 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449320 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449321 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449322 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449323 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449324 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449325 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449326 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449327 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449328 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449330 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449331 (Get FASTA)   NCBI Sequence Viewer  
  XP_017449332 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967185 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967187 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967188 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967189 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967190 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967191 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967192 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967193 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967194 (Get FASTA)   NCBI Sequence Viewer  
  XP_038967195 (Get FASTA)   NCBI Sequence Viewer  
  XP_232771 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDL80616 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_001063302   ⟸   XM_001063302
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_232771   ⟸   XM_232771
- Peptide Label: isoform X31
- Sequence:
RefSeq Acc Id: XP_006225617   ⟸   XM_006225555
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_006225609   ⟸   XM_006225547
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006225615   ⟸   XM_006225553
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_006239157   ⟸   XM_006239095
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_006239149   ⟸   XM_006239087
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_006239155   ⟸   XM_006239093
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_017458585   ⟸   XM_017603096
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017458601   ⟸   XM_017603112
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_017458592   ⟸   XM_017603103
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_017458602   ⟸   XM_017603113
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: XP_017458597   ⟸   XM_017603108
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_017458590   ⟸   XM_017603101
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_017458596   ⟸   XM_017603107
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_017458588   ⟸   XM_017603099
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017458598   ⟸   XM_017603109
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_017458595   ⟸   XM_017603106
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_017458589   ⟸   XM_017603100
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017458594   ⟸   XM_017603105
- Peptide Label: isoform X13
- Sequence:
RefSeq Acc Id: XP_017458586   ⟸   XM_017603097
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017458593   ⟸   XM_017603104
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_017458587   ⟸   XM_017603098
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017458591   ⟸   XM_017603102
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_017458600   ⟸   XM_017603111
- Peptide Label: isoform X19
- Sequence:
RefSeq Acc Id: XP_017458599   ⟸   XM_017603110
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_017449315   ⟸   XM_017593826
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017449331   ⟸   XM_017593842
- Peptide Label: isoform X20
- UniProtKB: D3ZKF7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017449322   ⟸   XM_017593833
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_017449332   ⟸   XM_017593843
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_017449327   ⟸   XM_017593838
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_017449320   ⟸   XM_017593831
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017449326   ⟸   XM_017593837
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_017449318   ⟸   XM_017593829
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017449328   ⟸   XM_017593839
- Peptide Label: isoform X16
- Sequence:
RefSeq Acc Id: XP_017449325   ⟸   XM_017593836
- Peptide Label: isoform X13
- UniProtKB: D3ZIP3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017449319   ⟸   XM_017593830
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017449324   ⟸   XM_017593835
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_017449316   ⟸   XM_017593827
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017449323   ⟸   XM_017593834
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_017449317   ⟸   XM_017593828
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017449321   ⟸   XM_017593832
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_017449330   ⟸   XM_017593841
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_017449329   ⟸   XM_017593840
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: ENSRNOP00000061387   ⟸   ENSRNOT00000067349
RefSeq Acc Id: ENSRNOP00000059520   ⟸   ENSRNOT00000067189
RefSeq Acc Id: ENSRNOP00000046109   ⟸   ENSRNOT00000051097
RefSeq Acc Id: ENSRNOP00000075428   ⟸   ENSRNOT00000079935
RefSeq Acc Id: ENSRNOP00000013761   ⟸   ENSRNOT00000013761
RefSeq Acc Id: ENSRNOP00000071712   ⟸   ENSRNOT00000088493
RefSeq Acc Id: XP_038967185   ⟸   XM_039111257
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038967188   ⟸   XM_039111260
- Peptide Label: isoform X21
RefSeq Acc Id: XP_038967187   ⟸   XM_039111259
- Peptide Label: isoform X19
RefSeq Acc Id: XP_038967195   ⟸   XM_039111267
- Peptide Label: isoform X30
RefSeq Acc Id: XP_038967192   ⟸   XM_039111264
- Peptide Label: isoform X27
RefSeq Acc Id: XP_038967190   ⟸   XM_039111262
- Peptide Label: isoform X25
RefSeq Acc Id: XP_038967194   ⟸   XM_039111266
- Peptide Label: isoform X29
RefSeq Acc Id: XP_038967193   ⟸   XM_039111265
- Peptide Label: isoform X28
RefSeq Acc Id: XP_038967191   ⟸   XM_039111263
- Peptide Label: isoform X26
RefSeq Acc Id: XP_038967189   ⟸   XM_039111261
- Peptide Label: isoform X24
Protein Domains
FERM

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Strain Variation

Strain Sequence Variants (Rnor 6.0)
ACI/EurMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
ACI/EurMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
ACI/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
BBDP/Wor (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
BN/SsN (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
Buf/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
COP/CrCrl (MCW & UW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
University of Wisconsin (Dr. James Shull)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Charles River Laboratories
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob) and UW Madison (Dr. James Shull)
F344/NCrl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
F344/NRrrc (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
FHH/EurMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
FHH/EurMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
FHL/EurMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
FHL/EurMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
GH/OmrMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
GK/Ox (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LE/Stm (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LEW/Crl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LEW/NCrlBR (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LH/MavRrrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LL/MavRrrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
LN/MavRrrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
M520/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
MHS/Gib (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
MNS/Gib (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
MR/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
SBH/Ygl (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: SBH/Ygl sequenced by MCW
SBH/Ygl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SBN/Ygl (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: SBN/Ygl sequenced by MCW
SBN/Ygl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SHR/NHsd (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SHRSP/Gcrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SR/JrHsd (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Harlan Laboratories
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
SR/JrHsd (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SS/Jr (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
SS/JrHsdMcwi (MCW)
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Sequenced By: Medical College of Wisconsin (Dr. Howard Jacob)
Platform: Illumina HiSeq 2000
Secondary Analysis: BWA v0.7.7 and GATK v3.2-2
Breeder: Medical College of Wisconsin
Description: Provided by the Medical College of Wisconsin (Dr. Howard Jacob)
SS/JrHsdMcwi (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WAG/Rij (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WKY/Gcrc (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WKY/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
WKY/NCrl (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WKY/NHsd (RGD)
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Platform: Illumina HiSeq 2000
Secondary Analysis: BWA mem 0.7.15, GATK v.3.6-0
Description: Sequences from Atanur et al and Hermsen et al realigned to the Rnor 6.0 assembly and reanalyzed by RGD
WN/N (MCW)
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Sequenced By: Royal Netherland Academy of Arts and Sciences (Dr. Edwin Cuppen)
Max Delbruck Center for Molecular Medicine (Dr. Norbert Huebner)
Platform: SOLiD 4 and 5500
Secondary Analysis: liftOver (Batch Coordinate Conversion)--genome.ucsc.edu
Breeder: National Institutes of Health
Description: Founder strain for the heterogeneous stock (HS) rat population; SNPs from the RGSC 3.4 assembly were "lifted over" from RGSC 3.4 to Rnor 5.0 and from Rnor 5.0 to Rnor 6.0; Provided by Medical College of Wisconsin
Damaging Variants


Assembly: Rnor_5.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
5 153845681 153845682 G A snv SBH/Ygl (MCW), SBH/Ygl (KNAW), SHR/NCrlPrin (KNAW), SHR/NHsd (KNAW), SHR/OlaIpcv (KNAW), SHR/OlaIpcvPrin (KNAW), DOB/Oda (KyushuU), WKY/Gcrc (KNAW), GK/Ox (KNAW), LE/OrlBarth (UDEL), Crl:SD (UDEL), IS/Kyo (KyushuU), IS-Tlk/Kyo (KyushuU), SHRSP/Gcrc (KNAW)


Assembly: Rnor_6.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
5 150096435 150096436 C T snv SHR/NHsd (RGD), SHRSP/Gcrc (RGD), WKY/Gcrc (RGD), GK/Ox (RGD)
5 150166959 150166960 G A snv WKY/Gcrc (RGD), SHR/NHsd (RGD), SBH/Ygl (RGD), SHRSP/Gcrc (RGD), GK/Ox (RGD), SBH/Ygl (MCW)


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1564762 AgrOrtholog
Ensembl Genes ENSRNOG00000010037 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000013761 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOP00000046109 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOP00000059520 UniProtKB/TrEMBL
  ENSRNOP00000061387 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOP00000071712 UniProtKB/TrEMBL
  ENSRNOP00000075428 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000013761 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOT00000051097 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOT00000067189 UniProtKB/TrEMBL
  ENSRNOT00000067349 ENTREZGENE, UniProtKB/TrEMBL
  ENSRNOT00000079935 UniProtKB/TrEMBL
  ENSRNOT00000088493 UniProtKB/TrEMBL
Gene3D-CATH 1.20.80.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
InterPro Band_4.1_C UniProtKB/TrEMBL
  Band_41_domain UniProtKB/TrEMBL
  Band_41_protein_chordates UniProtKB/TrEMBL
  Ez/rad/moesin UniProtKB/TrEMBL
  FERM-adjacent UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_3-hlx UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_central UniProtKB/TrEMBL
  FERM_CS UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  FERM_PH-like_C UniProtKB/TrEMBL
  PH_like_dom UniProtKB/TrEMBL
  SAB UniProtKB/TrEMBL
  Ubiquitin-rel_dom UniProtKB/TrEMBL
NCBI Gene 313052 ENTREZGENE
PANTHER PTHR23280:SF12 UniProtKB/TrEMBL
Pfam 4_1_CTD UniProtKB/TrEMBL
  FERM_C UniProtKB/TrEMBL
  FERM_M UniProtKB/TrEMBL
  FERM_N UniProtKB/TrEMBL
  PF08736 UniProtKB/TrEMBL
  SAB UniProtKB/TrEMBL
PhenoGen Epb41 PhenoGen
PRINTS BAND41 UniProtKB/TrEMBL
  ERMFAMILY UniProtKB/TrEMBL
PROSITE FERM_1 UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_3 UniProtKB/TrEMBL
SMART B41 UniProtKB/TrEMBL
  FERM_C UniProtKB/TrEMBL
  SM01195 UniProtKB/TrEMBL
Superfamily-SCOP FERM_3-hlx UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
UniProt A0A0G2K161_RAT UniProtKB/TrEMBL
  A0A0G2KAK2_RAT UniProtKB/TrEMBL
  D3ZIP3 ENTREZGENE, UniProtKB/TrEMBL
  D3ZKF7 ENTREZGENE, UniProtKB/TrEMBL
  D4A6Q4_RAT UniProtKB/TrEMBL
  D4A9A6_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-05-06 Epb41  erythrocyte membrane protein band 4.1  Epb4.1  erythrocyte membrane protein band 4.1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-07 Epb4.1  erythrocyte membrane protein band 4.1  RGD1564762_predicted  similar to erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) isoform 1 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2006-03-07 RGD1564762_predicted  similar to erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) isoform 1 (predicted)  LOC313052  similar to erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) isoform 1  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC313052  similar to erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) isoform 1      Symbol and Name status set to provisional 70820 PROVISIONAL