ONTOLOGY REPORT - ANNOTATIONS
Term: chondrocyte differentiation
Accession: GO:0002062
browse the term
Definition: The process in which a chondroblast acquires specialized structural and/or functional features of a chondrocyte. A chondrocyte is a polymorphic cell that forms cartilage.
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Adamts12
ADAM metallopeptidase with thrombospondin type 1 motif 12
involved_in
ISO
(PMID:29618652)
MGI
PMID:29618652
NCBI chrNW_004955426:19,146,288...19,471,880
Ensembl chrNW_004955426:19,150,343...19,471,534
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Adamts7
ADAM metallopeptidase with thrombospondin type 1 motif 7
involved_in
ISO
(PMID:29618652)
MGI
PMID:29618652
NCBI chrNW_004955450:525,313...581,006
Ensembl chrNW_004955450:529,999...577,621
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Arid5a
AT-rich interaction domain 5A
acts_upstream_of_or_within
ISO
(PMID:21346191)
MGI
PMID:21346191
NCBI chrNW_004955470:3,951,010...3,964,391
Ensembl chrNW_004955470:3,950,750...3,965,750
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Bmp2
bone morphogenetic protein 2
involved_in
ISO
(PMID:16194878)
AgBase
PMID:16194878
NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
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Bmp4
bone morphogenetic protein 4
acts_upstream_of involved_in
ISO
(PMID:17481601) (PMID:20059955)
MGI UniProt
PMID:17481601 PMID:20059955
NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
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Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(PMID:24098149)
UniProt
PMID:24098149
NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
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Bmpr1b
bone morphogenetic protein receptor type 1B
acts_upstream_of_or_within involved_in
ISO
(PMID:18363966) (PMID:24098149)
MGI UniProt
PMID:18363966 PMID:24098149
NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
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Ccn2
cellular communication network factor 2
acts_upstream_of_or_within
ISO
(PMID:15305294)
MGI
PMID:15305294
NCBI chrNW_004955436:12,523,602...12,526,986
Ensembl chrNW_004955436:12,522,944...12,526,480
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Ccn3
cellular communication network factor 3
involved_in
ISO
(PMID:21871891)
UniProt
PMID:21871891
RGD:10400852
NCBI chrNW_004955417:25,218,613...25,225,755
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Chrdl2
chordin like 2
acts_upstream_of_or_within
ISO
(PMID:14660436)
MGI
PMID:14660436
NCBI chrNW_004955414:16,986,199...17,018,166
Ensembl chrNW_004955414:16,986,233...17,018,225
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Col11a2
collagen type XI alpha 2 chain
acts_upstream_of_or_within
ISO
(PMID:11668593)
MGI
PMID:11668593
NCBI chrNW_004955437:1,739,426...1,767,087
Ensembl chrNW_004955437:1,740,402...1,766,490
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Col2a1
collagen type II alpha 1 chain
involved_in acts_upstream_of_or_within
ISO
(PMID:9119111) (PMID:11680679), (PMID:7590256)
RGD UniProt MGI
PMID:7590256 PMID:9119111 PMID:11680679 PMID:21627568
RGD:5134342
NCBI chrNW_004955500:6,860,771...6,885,466
Ensembl chrNW_004955500:6,860,771...6,885,473
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Col3a1
collagen type III alpha 1 chain
involved_in
ISO
(PMID:31655293)
MGI
PMID:31655293
NCBI chrNW_004955403:9,720,831...9,758,019
Ensembl chrNW_004955403:9,721,114...9,757,887
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Col9a1
collagen type IX alpha 1 chain
ISO
RGD
PMID:8992886
RGD:1600950
NCBI chrNW_004955488:5,296,895...5,384,940
Ensembl chrNW_004955488:5,296,895...5,384,940
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Creb3l2
cAMP responsive element binding protein 3 like 2
involved_in
ISO
(PMID:19767744)
UniProt
PMID:19767744
NCBI chrNW_004955494:5,014,509...5,094,220
Ensembl chrNW_004955494:5,045,272...5,089,121
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Ctnnb1
catenin beta 1
acts_upstream_of
ISO
(PMID:15866163) (PMID:16818445)
MGI
PMID:15866163 PMID:16818445
NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
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Cytl1
cytokine like 1
acts_upstream_of_or_within
ISO
(PMID:17644814)
MGI
PMID:17644814
NCBI chrNW_004955514:4,826,792...4,831,424
Ensembl chrNW_004955514:4,826,755...4,831,951
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Dll4
delta like canonical Notch ligand 4
ISO
RGD
PMID:26872979
RGD:11521858
NCBI chrNW_004955416:7,807,049...7,816,346
Ensembl chrNW_004955416:7,807,049...7,817,420
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:20080592), (PMID:20404326), (PMID:23458899), (PMID:28768899)
MGI
PMID:20080592 PMID:20404326 PMID:23458899 PMID:28768899
NCBI chrNW_004955417:23,798,044...24,067,759
Ensembl chrNW_004955417:23,798,393...24,067,100
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Ext2
exostosin glycosyltransferase 2
acts_upstream_of_or_within
ISO
(PMID:16236767)
MGI
PMID:16236767
NCBI chrNW_004955422:3,303,948...3,438,381
Ensembl chrNW_004955422:3,304,842...3,447,908
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Fgf18
fibroblast growth factor 18
acts_upstream_of
ISO
(PMID:15781473)
MGI
PMID:15781473
NCBI chrNW_004955408:24,225,459...24,260,057
Ensembl chrNW_004955408:24,225,459...24,260,092
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Fgf9
fibroblast growth factor 9
acts_upstream_of_or_within
ISO
(PMID:17544391)
MGI
PMID:17544391
NCBI chrNW_004955497:2,199,424...2,232,088
Ensembl chrNW_004955497:2,199,409...2,235,893
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Fgfr1
fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
(PMID:17544391)
MGI
PMID:17544391
NCBI chrNW_004955463:14,013,247...14,064,354
Ensembl chrNW_004955463:14,013,247...14,064,111
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Fosl2
FOS like 2, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
(PMID:15509771)
MGI
PMID:15509771
NCBI chrNW_004955469:10,297,179...10,319,180
Ensembl chrNW_004955469:10,297,179...10,319,180
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Gdf5
growth differentiation factor 5
acts_upstream_of
ISO
(PMID:9885252)
MGI
PMID:9885252
NCBI chrNW_004955422:25,992,081...25,997,122
Ensembl chrNW_004955422:25,992,081...25,997,122
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Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
(PMID:23333501)
MGI
PMID:23333501
NCBI chrNW_004955459:8,892,917...9,124,672
Ensembl chrNW_004955459:8,892,869...9,118,499
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Gli3
GLI family zinc finger 3
acts_upstream_of
ISO
(PMID:16284117)
MGI
PMID:16284117
NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
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Gpld1
glycosylphosphatidylinositol specific phospholipase D1
involved_in
ISO
(PMID:15946906)
UniProt
PMID:15946906
NCBI chrNW_004955483:2,501,751...2,552,855
Ensembl chrNW_004955483:2,502,345...2,552,689
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Hes5
hes family bHLH transcription factor 5
NOT|involved_in
ISO
(PMID:17093926)
UniProt
PMID:17093926
NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
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Hif1a
hypoxia inducible factor 1 subunit alpha
acts_upstream_of_or_within
ISO
(PMID:15073147)
MGI
PMID:15073147
NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
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Hmga2
high mobility group AT-hook 2
involved_in
ISO
(PMID:21484705)
UniProt
PMID:21484705
NCBI chrNW_004955458:12,493,790...12,624,805
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Hoxa11
homeobox A11
acts_upstream_of
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465
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Hoxd11
homeobox D11
acts_upstream_of
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955403:20,541,870...20,556,574
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Hspg2
heparan sulfate proteoglycan 2
acts_upstream_of_or_within
ISO
(PMID:10545953)
MGI
PMID:10545953
NCBI chrNW_004955452:2,056,428...2,141,937
Ensembl chrNW_004955452:2,057,326...2,120,280
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Ift80
intraflagellar transport 80
acts_upstream_of_or_within
ISO
(PMID:23333501)
MGI
PMID:23333501
NCBI chrNW_004955448:10,808,940...10,819,655
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Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
(PMID:15951842) (PMID:16284117)
MGI
PMID:15951842 PMID:16284117
NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
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Ltbp3
latent transforming growth factor beta binding protein 3
acts_upstream_of
ISO
(PMID:11790802)
MGI
PMID:11790802
NCBI chrNW_004955422:19,714,161...19,730,344
Ensembl chrNW_004955422:19,714,627...19,729,855
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Mapk14
mitogen-activated protein kinase 14
acts_upstream_of_or_within involved_in
ISO
(PMID:17644814) (PMID:17202865)
MGI AgBase
PMID:17202865 PMID:17644814
NCBI chrNW_004955437:3,836,331...3,884,083
Ensembl chrNW_004955437:3,838,232...3,884,083
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Matn1
matrilin 1
acts_upstream_of_or_within
ISO
(PMID:16877353)
MGI
PMID:16877353
NCBI chrNW_004955452:9,317,726...9,325,803
Ensembl chrNW_004955452:9,317,716...9,325,812
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Mef2c
myocyte enhancer factor 2C
acts_upstream_of_or_within
ISO
(PMID:17336904)
MGI
PMID:17336904
NCBI chrNW_004955418:22,537,388...22,701,434
Ensembl chrNW_004955418:22,537,285...22,701,434
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Mef2d
myocyte enhancer factor 2D
acts_upstream_of_or_within
ISO
(PMID:17336904)
MGI
PMID:17336904
NCBI chrNW_004955545:2,569,399...2,602,580
Ensembl chrNW_004955545:2,569,399...2,602,579
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Nfib
nuclear factor I B
involved_in
ISO
(PMID:17904922)
UniProt
PMID:17904922
NCBI chrNW_004955434:17,192,188...17,603,503
Ensembl chrNW_004955434:17,198,571...17,415,084
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Npr2
natriuretic peptide receptor 2
involved_in
ISO
(PMID:17728275)
MGI
PMID:17728275
NCBI chrNW_004955472:506,351...523,647
Ensembl chrNW_004955472:506,351...523,316
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Osr1
odd-skipped related transcription factor 1
involved_in
ISO
(PMID:21262216)
BHF-UCL
PMID:21262216
NCBI chrNW_004955469:1,954,470...1,961,344
Ensembl chrNW_004955469:1,953,370...1,961,390
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Osr2
odd-skipped related transciption factor 2
involved_in
ISO
(PMID:21262216)
BHF-UCL
PMID:21262216
NCBI chrNW_004955417:14,502,450...14,510,015
Ensembl chrNW_004955417:14,502,451...14,510,160
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Prkca
protein kinase C alpha
acts_upstream_of_or_within
ISO
(PMID:17644814)
MGI
PMID:17644814
NCBI chrNW_004955478:5,686,639...6,090,356
Ensembl chrNW_004955478:5,686,640...6,083,967
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Pth1r
parathyroid hormone 1 receptor
acts_upstream_of_or_within
ISO
(PMID:9832460) (PMID:16476422)
MGI
PMID:9832460 PMID:16476422
NCBI chrNW_004955420:25,274,269...25,291,984
Ensembl chrNW_004955420:25,273,431...25,296,471
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Pthlh
parathyroid hormone like hormone
acts_upstream_of
ISO
(PMID:8895385)
MGI
PMID:8895385
NCBI chrNW_004955505:6,834,533...6,846,909
Ensembl chrNW_004955505:6,834,533...6,847,335
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Rb1
RB transcriptional corepressor 1
involved_in
ISO
(PMID:18638549)
MGI
PMID:18638549
NCBI chrNW_004955431:1,960,765...2,124,576
Ensembl chrNW_004955431:1,960,661...2,124,576
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Ror2
receptor tyrosine kinase like orphan receptor 2
acts_upstream_of_or_within
ISO
(PMID:14745966)
MGI
PMID:14745966
NCBI chrNW_004955515:313,612...554,751
Ensembl chrNW_004955515:313,604...553,774
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Runx2
RUNX family transcription factor 2
acts_upstream_of acts_upstream_of_or_within
ISO
(PMID:10072783) (PMID:22916278) (PMID:16476422)
MGI
PMID:10072783 PMID:16476422 PMID:22916278
NCBI chrNW_004955437:10,598,145...10,885,858
Ensembl chrNW_004955437:10,598,145...10,800,560
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Runx3
RUNX family transcription factor 3
acts_upstream_of_or_within
ISO
(PMID:22916278)
MGI
PMID:22916278
NCBI chrNW_004955452:4,580,444...4,606,820
Ensembl chrNW_004955452:4,579,331...4,636,884
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Scx
scleraxis bHLH transcription factor
involved_in
ISO
(PMID:20059955)
UniProt
PMID:20059955
NCBI chrNW_004955454:2,886,981...2,888,829
Ensembl chrNW_004955454:2,886,981...2,888,829
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Shox2
SHOX homeobox 2
acts_upstream_of_or_within
ISO
(PMID:22916278)
MGI
PMID:22916278
NCBI chrNW_004955448:8,937,656...8,947,890
Ensembl chrNW_004955448:8,937,610...8,947,890
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Six2
SIX homeobox 2
acts_upstream_of_or_within
ISO
(PMID:20515681)
MGI
PMID:20515681
NCBI chrNW_004955441:12,029,530...12,033,214
Ensembl chrNW_004955441:12,029,480...12,033,214
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Slc26a2
solute carrier family 26 member 2
involved_in
ISO
(PMID:24302720)
UniProt
PMID:24302720
NCBI chrNW_004955415:4,540,302...4,556,360
Ensembl chrNW_004955415:4,540,302...4,556,360
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Slc39a14
solute carrier family 39 member 14
acts_upstream_of
ISO
(PMID:21445361)
UniProt
PMID:21445361
NCBI chrNW_004955403:45,828,247...45,867,309
Ensembl chrNW_004955403:45,827,942...45,867,309
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Snx19
sorting nexin 19
involved_in acts_upstream_of_or_within
ISO
(PMID:19877062)
GO_Central MGI
PMID:19877062
NCBI chrNW_004955412:31,747,519...31,791,022
Ensembl chrNW_004955412:31,747,760...31,791,044
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Sox5
SRY-box transcription factor 5
involved_in
ISO
(PMID:11702786), (PMID:14993235)
UniProt
PMID:11702786 PMID:14993235
NCBI chrNW_004955413:18,831,931...19,676,371
Ensembl chrNW_004955413:18,831,931...19,204,217
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Sox6
SRY-box transcription factor 6
involved_in
ISO
(PMID:11702786), (PMID:14993235)
UniProt
PMID:11702786 PMID:14993235
NCBI chrNW_004955414:30,965,626...31,532,473
Ensembl chrNW_004955414:30,971,920...31,335,263
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Sox9
SRY-box transcription factor 9
acts_upstream_of involved_in acts_upstream_of_or_within
ISO
(PMID:11371614) (PMID:15132997), (PMID:29644115) (PMID:32103177) (PMID:9119111) (PMID:12414734)
MGI UniProt
PMID:9119111 PMID:11371614 PMID:12414734 PMID:15132997 PMID:29644115 PMID:32103177 More...
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Tgfb1
transforming growth factor beta 1
involved_in
ISO
(PMID:15040835)
UniProt
PMID:15040835
NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
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Tgfbi
transforming growth factor beta induced
ISO
RGD
PMID:16546826
RGD:1599388
NCBI chrNW_004955408:31,093,450...31,124,715
Ensembl chrNW_004955408:31,093,050...31,125,398
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Trps1
transcriptional repressor GATA binding 1
acts_upstream_of_or_within
ISO
(PMID:18363966)
MGI
PMID:18363966
NCBI chrNW_004955417:21,674,545...21,913,137
Ensembl chrNW_004955417:21,680,116...21,913,173
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Twsg1
twisted gastrulation BMP signaling modulator 1
acts_upstream_of_or_within
ISO
(PMID:14681194)
MGI
PMID:14681194
NCBI chrNW_004955402:2,652,020...2,685,350
Ensembl chrNW_004955402:2,652,020...2,686,117
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Wnt10b
Wnt family member 10B
involved_in
ISO
(PMID:15135146)
UniProt
PMID:15135146
NCBI chrNW_004955500:7,782,782...7,800,281
Ensembl chrNW_004955500:7,782,782...7,788,309
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Wnt2b
Wnt family member 2B
involved_in
ISO
(PMID:15135146)
UniProt
PMID:15135146
NCBI chrNW_004955435:15,948,262...15,962,958
Ensembl chrNW_004955435:15,948,262...15,962,958
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Wnt5b
Wnt family member 5B
involved_in
ISO
(PMID:15135146)
UniProt
PMID:15135146
NCBI chrNW_004955454:4,158,648...4,192,709
Ensembl chrNW_004955454:4,178,609...4,192,710
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Wnt7a
Wnt family member 7A
involved_in
ISO
(PMID:17202865)
AgBase
PMID:17202865
NCBI chrNW_004955429:12,647,993...12,693,998
Ensembl chrNW_004955429:12,647,993...12,694,895
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Wnt9a
Wnt family member 9A
acts_upstream_of
ISO
(PMID:16818445)
MGI
PMID:16818445
NCBI chrNW_004955581:422,028...438,321
Ensembl chrNW_004955581:421,451...438,380
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Acan
aggrecan
acts_upstream_of_or_within
ISO
(PMID:9664687)
MGI
PMID:9664687
NCBI chrNW_004955416:16,125,536...16,186,046
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Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:9442116)
AgBase
PMID:9442116
NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
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Bpnt2
3'(2'), 5'-bisphosphate nucleotidase 2
acts_upstream_of_or_within
ISO
(PMID:18539921)
MGI
PMID:18539921
NCBI chrNW_004955454:15,899,820...15,918,222
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Chst11
carbohydrate sulfotransferase 11
acts_upstream_of_or_within
ISO
(PMID:16079159)
MGI
PMID:16079159
NCBI chrNW_004955405:38,985,046...39,134,130
Ensembl chrNW_004955405:38,985,046...39,139,021
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Chsy1
chondroitin sulfate synthase 1
acts_upstream_of_or_within
ISO
(PMID:22280990)
MGI
PMID:22280990
NCBI chrNW_004955416:28,070,981...28,136,848
Ensembl chrNW_004955416:28,070,710...28,135,590
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Col11a1
collagen type XI alpha 1 chain
acts_upstream_of_or_within
ISO
(PMID:4100752)
MGI
PMID:4100752
NCBI chrNW_004955435:7,352,617...7,545,235
Ensembl chrNW_004955435:7,352,617...7,545,235
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Ecm1
extracellular matrix protein 1
acts_upstream_of_or_within
ISO
(PMID:20138147)
MGI
PMID:20138147
NCBI chrNW_004955413:293,295...299,293
Ensembl chrNW_004955413:290,363...299,130
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Eif2ak3
eukaryotic translation initiation factor 2 alpha kinase 3
acts_upstream_of_or_within
ISO
(PMID:12865332)
MGI
PMID:12865332
NCBI chrNW_004955424:210,867...279,267
Ensembl chrNW_004955424:226,038...280,593
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Fgf18
fibroblast growth factor 18
acts_upstream_of_or_within
ISO
(PMID:17014841)
MGI
PMID:17014841
NCBI chrNW_004955408:24,225,459...24,260,057
Ensembl chrNW_004955408:24,225,459...24,260,092
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Galnt3
polypeptide N-acetylgalactosaminyltransferase 3
acts_upstream_of_or_within
ISO
(PMID:25107907)
MGI
PMID:25107907
NCBI chrNW_004955449:8,365,951...8,406,988
Ensembl chrNW_004955449:8,379,164...8,406,988
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Hoxa11
homeobox A11
acts_upstream_of
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465
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Hoxd11
homeobox D11
acts_upstream_of
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955403:20,541,870...20,556,574
G
Mia3
MIA SH3 domain ER export factor 3
acts_upstream_of_or_within
ISO
(PMID:21606205)
MGI
PMID:21606205
NCBI chrNW_004955520:1,853,145...1,890,338
Ensembl chrNW_004955520:1,850,942...1,890,390
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Msx2
msh homeobox 2
acts_upstream_of_or_within
ISO
(PMID:10742104)
MGI
PMID:10742104
NCBI chrNW_004955408:27,323,405...27,329,484
Ensembl chrNW_004955408:27,323,360...27,329,755
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Rarg
retinoic acid receptor gamma
involved_in
ISO
(PMID:19389355)
UniProt
PMID:19389355
NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
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Runx2
RUNX family transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:10213384)
MGI
PMID:10213384
NCBI chrNW_004955437:10,598,145...10,885,858
Ensembl chrNW_004955437:10,598,145...10,800,560
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Sfrp2
secreted frizzled related protein 2
acts_upstream_of_or_within
ISO
(PMID:18729207)
MGI
PMID:18729207
NCBI chrNW_004955471:8,103,937...8,112,596
Ensembl chrNW_004955471:8,103,783...8,112,321
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Shox2
SHOX homeobox 2
acts_upstream_of_or_within
ISO
(PMID:17481601)
MGI
PMID:17481601
NCBI chrNW_004955448:8,937,656...8,947,890
Ensembl chrNW_004955448:8,937,610...8,947,890
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Smpd3
sphingomyelin phosphodiesterase 3
acts_upstream_of_or_within
ISO
(PMID:24505141) (PMID:17591962)
MGI
PMID:17591962 PMID:24505141
NCBI chrNW_004955484:8,207,686...8,298,164
Ensembl chrNW_004955484:8,272,572...8,298,144
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:18415932)
MGI
PMID:18415932
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Sulf1
sulfatase 1
involved_in
ISO
(PMID:20479257)
UniProt
PMID:20479257
NCBI chrNW_004955444:9,902,334...10,066,929
Ensembl chrNW_004955444:9,899,941...9,974,666
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Sulf2
sulfatase 2
involved_in
ISO
(PMID:20479257)
UniProt
PMID:20479257
NCBI chrNW_004955445:9,919,472...10,020,491
Ensembl chrNW_004955445:9,920,789...10,020,491
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Serpinh1
serpin family H member 1
acts_upstream_of_or_within
ISO
(PMID:22492985)
MGI
PMID:22492985
NCBI chrNW_004955414:16,284,845...16,292,828
Ensembl chrNW_004955414:16,284,845...16,292,963
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Smpd3
sphingomyelin phosphodiesterase 3
acts_upstream_of_or_within
ISO
(PMID:21788370)
MGI
PMID:21788370
NCBI chrNW_004955484:8,207,686...8,298,164
Ensembl chrNW_004955484:8,272,572...8,298,144
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Axin2
axin 2
acts_upstream_of_or_within
ISO
(PMID:19623616)
MGI
PMID:19623616
NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225
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Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
(PMID:25639508)
MGI
PMID:25639508
NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
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Scube2
signal peptide, CUB domain and EGF like domain containing 2
acts_upstream_of_or_within
ISO
(PMID:25639508)
MGI
PMID:25639508
NCBI chrNW_004955414:24,751,134...24,818,338
Ensembl chrNW_004955414:24,752,629...24,818,336
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Sox9
SRY-box transcription factor 9
involved_in
ISO
(PMID:20676705)
UniProt
PMID:20676705
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Trip11
thyroid hormone receptor interactor 11
acts_upstream_of_or_within
ISO
(PMID:20089971)
MGI
PMID:20089971
NCBI chrNW_004955438:14,327,400...14,394,022
Ensembl chrNW_004955438:14,322,576...14,394,022
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within
ISO
(PMID:23958822)
MGI
PMID:23958822
NCBI chrNW_004955417:23,798,044...24,067,759
Ensembl chrNW_004955417:23,798,393...24,067,100
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Mex3c
mex-3 RNA binding family member C
acts_upstream_of_or_within
ISO
(PMID:22357625)
MGI
PMID:22357625
NCBI chrNW_004955402:36,049,461...36,065,765
Ensembl chrNW_004955402:36,047,856...36,065,771
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Sox9
SRY-box transcription factor 9
involved_in
ISO
(PMID:21367821)
UniProt
PMID:21367821
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Col27a1
collagen type XXVII alpha 1 chain
acts_upstream_of_or_within
ISO
(PMID:22206015)
MGI
PMID:22206015
NCBI chrNW_004955419:13,289,006...13,411,118
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Poc1a
POC1 centriolar protein A
acts_upstream_of_or_within
ISO
(PMID:26496357)
MGI
PMID:26496357
NCBI chrNW_004955532:3,707,680...3,790,565
Ensembl chrNW_004955532:3,708,274...3,789,797
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Atf2
activating transcription factor 2
involved_in
ISO
(PMID:18638549)
MGI
PMID:18638549
NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218
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Ift80
intraflagellar transport 80
acts_upstream_of_or_within
ISO
(PMID:26098911)
MGI
PMID:26098911
NCBI chrNW_004955448:10,808,940...10,819,655
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Nppc
natriuretic peptide C
involved_in
ISO
(PMID:11259675)
UniProt
PMID:11259675
NCBI chrNW_004955453:3,884,580...3,888,494
Ensembl chrNW_004955453:3,884,560...3,888,850
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Rarg
retinoic acid receptor gamma
involved_in
ISO
(PMID:19389355)
UniProt
PMID:19389355
NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
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Sox9
SRY-box transcription factor 9
involved_in
ISO
(PMID:22421045)
UniProt
PMID:22421045
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Tgfbr2
transforming growth factor beta receptor 2
acts_upstream_of_or_within
ISO
(PMID:21420963)
MGI
PMID:21420963
NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837
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Matn1
matrilin 1
acts_upstream_of_or_within
ISO
(PMID:16877353)
MGI
PMID:16877353
NCBI chrNW_004955452:9,317,726...9,325,803
Ensembl chrNW_004955452:9,317,716...9,325,812
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LOC102011120
filamin-interacting protein FAM101A
acts_upstream_of_or_within
ISO
(PMID:24436304)
MGI
PMID:24436304
NCBI chrNW_004955482:5,034,075...5,044,162
Ensembl chrNW_004955482:5,033,914...5,042,790
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Pthlh
parathyroid hormone like hormone
acts_upstream_of_or_within
ISO
(PMID:90087)
MGI
PMID:90087
NCBI chrNW_004955505:6,834,533...6,846,909
Ensembl chrNW_004955505:6,834,533...6,847,335
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Rflnb
refilin B
acts_upstream_of_or_within
ISO
(PMID:24436304)
MGI
PMID:24436304
NCBI chrNW_004955481:2,102,576...2,107,947
Ensembl chrNW_004955481:2,102,586...2,107,967
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Adamts12
ADAM metallopeptidase with thrombospondin type 1 motif 12
involved_in
ISO
(PMID:22247065)
BHF-UCL
PMID:22247065
NCBI chrNW_004955426:19,146,288...19,471,880
Ensembl chrNW_004955426:19,150,343...19,471,534
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Adamts7
ADAM metallopeptidase with thrombospondin type 1 motif 7
involved_in
ISO
(PMID:22247065)
BHF-UCL
PMID:22247065
NCBI chrNW_004955450:525,313...581,006
Ensembl chrNW_004955450:529,999...577,621
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Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO
(PMID:17481601)
MGI
PMID:17481601
NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
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Ccn4
cellular communication network factor 4
involved_in
ISO
(PMID:15331410)
UniProt
PMID:15331410
NCBI chrNW_004955461:7,748,399...7,780,359
Ensembl chrNW_004955461:7,748,005...7,780,427
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Chadl
chondroadherin like
involved_in
ISO
(PMID:25451920)
UniProt
PMID:25451920
NCBI chrNW_004955413:26,846,714...26,862,082
Ensembl chrNW_004955413:26,851,420...26,862,081
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Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
(PMID:15866163) (PMID:16818445)
MGI
PMID:15866163 PMID:16818445
NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
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Efemp1
EGF containing fibulin extracellular matrix protein 1
involved_in
ISO
(PMID:20005202)
UniProt
PMID:20005202
NCBI chrNW_004955424:27,181,717...27,240,067
Ensembl chrNW_004955424:27,181,099...27,240,446
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Gdf5
growth differentiation factor 5
involved_in
ISO
(PMID:21976273)
UniProt
PMID:21976273
NCBI chrNW_004955422:25,992,081...25,997,122
Ensembl chrNW_004955422:25,992,081...25,997,122
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Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
(PMID:17328886)
MGI
PMID:17328886
NCBI chrNW_004955459:8,892,917...9,124,672
Ensembl chrNW_004955459:8,892,869...9,118,499
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
(PMID:16284117)
MGI
PMID:16284117
NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
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Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:10556075)
AgBase
PMID:10556075
NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
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Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
(PMID:16284117)
MGI
PMID:16284117
NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
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Ltbp3
latent transforming growth factor beta binding protein 3
acts_upstream_of_or_within
ISO
(PMID:11790802)
MGI
PMID:11790802
NCBI chrNW_004955422:19,714,161...19,730,344
Ensembl chrNW_004955422:19,714,627...19,729,855
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Mkx
mohawk homeobox
ISO
RGD
PMID:27370800
RGD:40924660
NCBI chrNW_004955462:1,564,739...1,631,613
Ensembl chrNW_004955462:1,564,191...1,631,951
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Nkx3-2
NK3 homeobox 2
involved_in
ISO
(PMID:16421188)
UniProt
PMID:16421188
NCBI chrNW_004955480:10,212,929...10,215,814
Ensembl chrNW_004955480:10,213,761...10,216,860
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Pth
parathyroid hormone
involved_in
ISO
PMID:11604398
CAFA
PMID:11604398
RGD:12793028
NCBI chrNW_004955414:28,828,389...28,831,417
Ensembl chrNW_004955414:28,825,651...28,831,117
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Pthlh
parathyroid hormone like hormone
acts_upstream_of_or_within
ISO
(PMID:90087) (PMID:17328886) (PMID:8895385)
MGI
PMID:90087 PMID:8895385 PMID:17328886
NCBI chrNW_004955505:6,834,533...6,846,909
Ensembl chrNW_004955505:6,834,533...6,847,335
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Ptpn11
protein tyrosine phosphatase non-receptor type 11
involved_in
ISO
(PMID:29644115)
UniProt
PMID:29644115
NCBI chrNW_004955482:8,934,734...9,031,230
Ensembl chrNW_004955482:8,934,306...9,035,203
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Rarb
retinoic acid receptor beta
acts_upstream_of_or_within
ISO
(PMID:10684250)
MGI
PMID:10684250
NCBI chrNW_004955430:17,067,536...17,457,558
Ensembl chrNW_004955430:17,295,174...17,460,045
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Rarg
retinoic acid receptor gamma
acts_upstream_of_or_within
ISO
(PMID:10684250)
MGI
PMID:10684250
NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
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Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:19756381)
BHF-UCL
PMID:19756381
NCBI chrNW_004955454:8,759,860...8,763,603
Ensembl chrNW_004955454:8,758,636...8,764,427
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
(PMID:11371614)
MGI
PMID:11371614
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Tgfbr1
transforming growth factor beta receptor 1
involved_in
ISO
(PMID:19494318)
BHF-UCL
PMID:19494318
NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
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Wnt9a
Wnt family member 9A
acts_upstream_of_or_within
ISO
(PMID:16818445)
MGI
PMID:16818445
NCBI chrNW_004955581:422,028...438,321
Ensembl chrNW_004955581:421,451...438,380
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Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465
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Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955403:20,541,870...20,556,574
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Bmp6
bone morphogenetic protein 6
ISO
RGD
PMID:23077084
RGD:7242190
NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377
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Fgf18
fibroblast growth factor 18
acts_upstream_of_or_within
ISO
(PMID:15781473)
MGI
PMID:15781473
NCBI chrNW_004955408:24,225,459...24,260,057
Ensembl chrNW_004955408:24,225,459...24,260,092
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Gdf5
growth differentiation factor 5
involved_in acts_upstream_of_or_within
ISO
(PMID:21976273), (PMID:24098149) (PMID:9885252) (PMID:18363966)
UniProt MGI
PMID:9885252 PMID:18363966 PMID:21976273 PMID:24098149
NCBI chrNW_004955422:25,992,081...25,997,122
Ensembl chrNW_004955422:25,992,081...25,997,122
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Gdf6
growth differentiation factor 6
involved_in
ISO
(PMID:26643732)
UniProt
PMID:26643732
NCBI chrNW_004955417:12,152,448...12,169,173
Ensembl chrNW_004955417:12,152,448...12,169,362
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
(PMID:17328886)
MGI
PMID:17328886
NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
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Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465
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Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
(PMID:14668414)
MGI
PMID:14668414
NCBI chrNW_004955403:20,541,870...20,556,574
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Loxl2
lysyl oxidase like 2
involved_in
ISO
(PMID:21071451)
UniProt
PMID:21071451
NCBI chrNW_004955403:46,503,226...46,583,807
Ensembl chrNW_004955403:46,504,440...46,584,016
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Mustn1
musculoskeletal, embryonic nuclear protein 1
acts_upstream_of_or_within
ISO
(PMID:19410023)
MGI
PMID:19410023
NCBI chrNW_004955430:2,790,090...2,793,880
Ensembl chrNW_004955430:2,790,090...2,793,880
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Pkdcc
protein kinase domain containing, cytoplasmic
involved_in
ISO
(PMID:19097194), (PMID:19465597)
UniProt
PMID:19097194 PMID:19465597
NCBI chrNW_004955441:9,462,530...9,471,446
Ensembl chrNW_004955441:9,462,530...9,471,446
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Por
P450 (cytochrome) oxidoreductase
ISO
RGD
PMID:19264869
RGD:2316785
NCBI chrNW_004955456:14,698,589...14,748,520
Ensembl chrNW_004955456:14,698,589...14,748,520
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Prkg2
protein kinase cGMP-dependent 2
ISO
RGD
PMID:15466490
RGD:150429792
NCBI chrNW_004955433:5,286,594...5,387,571
Ensembl chrNW_004955433:5,286,153...5,491,924
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Rela
RELA proto-oncogene, NF-kB subunit
ISO
RGD
PMID:17884819
RGD:2298851
NCBI chrNW_004955422:19,602,930...19,612,263
Ensembl chrNW_004955422:19,603,345...19,611,516
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Runx2
RUNX family transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:10072783)
MGI
PMID:10072783
NCBI chrNW_004955437:10,598,145...10,885,858
Ensembl chrNW_004955437:10,598,145...10,800,560
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Smad3
SMAD family member 3
involved_in
ISO
(PMID:21035443)
UniProt
PMID:21035443
NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
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Sox5
SRY-box transcription factor 5
involved_in
ISO
(PMID:21401405) (PMID:20940257)
UniProt
PMID:20940257 PMID:21401405
NCBI chrNW_004955413:18,831,931...19,676,371
Ensembl chrNW_004955413:18,831,931...19,204,217
G
Sox6
SRY-box transcription factor 6
involved_in
ISO
(PMID:21401405) (PMID:20940257)
UniProt
PMID:20940257 PMID:21401405
NCBI chrNW_004955414:30,965,626...31,532,473
Ensembl chrNW_004955414:30,971,920...31,335,263
G
Sox9
SRY-box transcription factor 9
involved_in
ISO
(PMID:21401405) (PMID:20940257) (PMID:21367821) (PMID:20676705)
UniProt
PMID:20676705 PMID:20940257 PMID:21367821 PMID:21401405
NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
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Thrb
thyroid hormone receptor beta
ISO
RGD
PMID:15647824
RGD:1601663
NCBI chrNW_004955430:15,992,146...16,322,696
Ensembl chrNW_004955430:15,992,146...16,323,238
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Zbtb16
zinc finger and BTB domain containing 16
involved_in
ISO
(PMID:21547890)
UniProt
PMID:21547890
NCBI chrNW_004955412:15,668,332...15,845,384
Ensembl chrNW_004955412:15,668,332...15,845,372
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Znf219
zinc finger protein 219
involved_in
ISO
(PMID:20940257)
UniProt
PMID:20940257
NCBI chrNW_004955550:1,854,330...1,861,836
G
Smad7
SMAD family member 7
involved_in
ISO
(PMID:29503843)
CACAO
PMID:29503843
NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291
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Axin2
axin 2
acts_upstream_of_or_within
ISO
(PMID:19623616)
MGI
PMID:19623616
NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225
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Ccn2
cellular communication network factor 2
acts_upstream_of_or_within
ISO
(PMID:18597638)
MGI
PMID:18597638
NCBI chrNW_004955436:12,523,602...12,526,986
Ensembl chrNW_004955436:12,522,944...12,526,480
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Glg1
golgi glycoprotein 1
acts_upstream_of_or_within
ISO
(PMID:20530870)
MGI
PMID:20530870
NCBI chrNW_004955484:2,871,390...2,987,913
Ensembl chrNW_004955484:2,870,872...2,983,467
G
Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
(PMID:22916278)
MGI
PMID:22916278
NCBI chrNW_004955410:28,875,780...28,879,643
Ensembl chrNW_004955410:28,877,055...28,879,465
G
Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
(PMID:22916278)
MGI
PMID:22916278
NCBI chrNW_004955403:20,541,870...20,556,574
G
Lnpk
lunapark, ER junction formation factor
acts_upstream_of_or_within
ISO
(PMID:22916278)
MGI
PMID:22916278
NCBI chrNW_004955403:20,654,961...20,728,173
Ensembl chrNW_004955403:20,654,961...20,729,954
G
Maf
MAF bZIP transcription factor
acts_upstream_of_or_within
ISO
(PMID:14512017)
MGI
PMID:14512017
NCBI chrNW_004955522:2,514,313...2,519,694
G
Mboat2
membrane bound O-acyltransferase domain containing 2
involved_in
ISO
(PMID:29196633)
UniProt
PMID:29196633
NCBI chrNW_004955487:721,574...773,714
G
Mdk
midkine
involved_in
ISO
(PMID:25551381)
UniProt
PMID:25551381
NCBI chrNW_004955422:1,655,351...1,657,026
Ensembl chrNW_004955422:1,655,358...1,657,044
G
Shox2
SHOX homeobox 2
acts_upstream_of_or_within
ISO
(PMID:16537395)
MGI
PMID:16537395
NCBI chrNW_004955448:8,937,656...8,947,890
Ensembl chrNW_004955448:8,937,610...8,947,890
G
Six2
SIX homeobox 2
involved_in
ISO
(PMID:20515681)
UniProt
PMID:20515681
NCBI chrNW_004955441:12,029,530...12,033,214
Ensembl chrNW_004955441:12,029,480...12,033,214
G
Trps1
transcriptional repressor GATA binding 1
involved_in
ISO
(PMID:19389374)
UniProt
PMID:19389374
NCBI chrNW_004955417:21,674,545...21,913,137
Ensembl chrNW_004955417:21,680,116...21,913,173
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all