Mia3 (MIA SH3 domain ER export factor 3) - Rat Genome Database

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Gene: Mia3 (MIA SH3 domain ER export factor 3) Chinchilla lanigera
Analyze
Symbol: Mia3
Name: MIA SH3 domain ER export factor 3
RGD ID: 8834784
Description: ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog); intracellular membrane-bounded organelle (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: melanoma inhibitory activity family, member 3; melanoma inhibitory activity protein 3; MIA family member 3, ER export factor
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555201,850,942 - 1,890,390 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555201,853,145 - 1,890,338 (-)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Mia3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555201,850,942 - 1,890,390 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555201,853,145 - 1,890,338 (-)NCBIChiLan1.0ChiLan1.0
MIA3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381222,618,097 - 222,668,007 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1222,618,097 - 222,668,007 (+)EnsemblGRCh38hg38GRCh38
GRCh371222,791,439 - 222,841,349 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361220,858,067 - 220,907,974 (+)NCBINCBI36Build 36hg18NCBI36
Celera1196,010,506 - 196,060,426 (+)NCBICelera
Cytogenetic Map1q41NCBI
HuRef1193,465,425 - 193,515,349 (+)NCBIHuRef
CHM1_11224,063,933 - 224,113,866 (+)NCBICHM1_1
T2T-CHM13v2.01221,851,826 - 221,901,751 (+)NCBIT2T-CHM13v2.0
Mia3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391183,107,091 - 183,151,091 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1183,107,682 - 183,150,894 (-)EnsemblGRCm39 Ensembl
GRCm381183,326,236 - 183,369,565 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1183,326,725 - 183,369,553 (-)EnsemblGRCm38mm10GRCm38
Celera1190,326,494 - 190,370,357 (-)NCBICelera
Cytogenetic Map1H5NCBI
Mia3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81397,502,040 - 97,547,155 (-)NCBIGRCr8
mRatBN7.21394,970,421 - 95,012,071 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1394,970,424 - 95,011,972 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1397,475,789 - 97,517,336 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01398,875,598 - 98,917,143 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01396,057,744 - 96,099,289 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.013101,727,434 - 101,770,127 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl13101,727,935 - 101,761,541 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.013100,935,910 - 100,975,638 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1394,497,011 - 94,538,361 (-)NCBICelera
Cytogenetic Map13q26NCBI
MIA3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2126,654,962 - 26,708,563 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1126,608,370 - 26,662,214 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01198,291,200 - 198,339,502 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11203,307,949 - 203,354,919 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1203,304,237 - 203,354,919 (+)Ensemblpanpan1.1panPan2
MIA3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13816,880,411 - 16,936,368 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3816,879,740 - 16,935,844 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3816,935,124 - 16,992,958 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03816,925,143 - 16,982,995 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3816,904,493 - 16,983,727 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13816,930,566 - 16,988,381 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03817,280,373 - 17,337,228 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03817,574,654 - 17,632,475 (+)NCBIUU_Cfam_GSD_1.0
MIA3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1011,377,846 - 11,429,015 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11011,362,489 - 11,428,844 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21013,549,341 - 13,583,336 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MIA3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1256,901,891 - 6,954,556 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl256,902,425 - 6,954,526 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660557,140,156 - 7,193,188 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCLAT00000003719   ⟹   ENSCLAP00000003645
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0 EnsemblNW_0049555201,850,942 - 1,890,390 (-)Ensembl
RefSeq Acc Id: XM_005409256   ⟹   XP_005409313
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555201,853,145 - 1,890,338 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005409313 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCLAP00000003645
  ENSCLAP00000003645.1
Reference Protein Sequences
RefSeq Acc Id: XP_005409313   ⟸   XM_005409256
- UniProtKB: A0A8C2UQG6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCLAP00000003645   ⟸   ENSCLAT00000003719
Protein Domains
SH3


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCLAG00000002599 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCLAT00000003719 ENTREZGENE
  ENSCLAT00000003719.1 UniProtKB/TrEMBL
Gene3D-CATH SH3 Domains UniProtKB/TrEMBL
InterPro SH3-like_dom_sf UniProtKB/TrEMBL
  SH3_domain UniProtKB/TrEMBL
NCBI Gene Mia3 ENTREZGENE
PANTHER MELANOMA INHIBITORY ACTIVITY-RELATED UniProtKB/TrEMBL
  TRANSPORT AND GOLGI ORGANIZATION PROTEIN 1 HOMOLOG UniProtKB/TrEMBL
PROSITE SH3 UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/TrEMBL
UniProt A0A8C2UQG6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-22 Mia3  MIA SH3 domain ER export factor 3    MIA family member 3, ER export factor  Symbol and/or name change 5135510 APPROVED
2016-08-03 Mia3  MIA family member 3, ER export factor    melanoma inhibitory activity family, member 3  Symbol and/or name change 5135510 APPROVED