Sox5 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955413 | 18,831,931 - 19,204,217 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955413 | 18,831,931 - 19,676,371 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SOX5 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 12 | 23,529,504 - 24,562,650 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 23,529,504 - 24,562,544 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 23,682,438 - 24,715,425 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 23,576,498 - 24,606,647 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 12 | 28,833,198 - 29,862,278 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | p12.1 | NCBI | | | | | HuRef | 12 | 23,452,599 - 24,484,456 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 23,650,324 - 24,680,623 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 23,401,301 - 24,433,529 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Sox5 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 143,774,151 - 144,728,008 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 143,774,151 - 144,727,703 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 143,828,425 - 144,782,287 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 143,828,425 - 144,781,977 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 143,781,349 - 144,158,078 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 143,790,051 - 144,166,639 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 146,885,590 - 147,265,302 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | G3 | NCBI | | | | | cM Map | 6 | 76.14 | NCBI | | | | |
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Sox5 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 178,512,272 - 179,467,686 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 176,781,375 - 177,736,833 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 176,785,892 - 177,736,852 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 183,088,517 - 183,461,996 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 178,872,831 - 179,246,322 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 177,493,406 - 177,866,892 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 178,062,267 - 179,031,991 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 178,066,165 - 178,441,547 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 242,266,295 - 243,221,217 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 181,558,995 - 181,931,117 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 181,825,983 - 182,011,429 (-) | NCBI | | | | | Celera | 4 | 165,313,274 - 165,629,808 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q44 | NCBI | | | | |
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SOX5 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 10 | 72,253,383 - 73,284,141 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 72,249,780 - 73,280,539 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 62,361,631 - 62,780,805 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 64,973,019 - 65,391,500 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 64,971,818 - 65,388,694 (+) | Ensembl | panpan1.1 | | panPan2 | |
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SOX5 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 27 | 22,857,661 - 23,855,709 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 27 | 23,452,985 - 23,851,380 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 27 | 22,515,990 - 23,511,350 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 27 | 23,058,695 - 24,061,457 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 27 | 23,059,559 - 24,061,452 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 27 | 22,871,574 - 23,867,072 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 27 | 22,890,892 - 23,887,914 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 27 | 22,685,794 - 23,683,255 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Sox5 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404945 | 84,725,370 - 85,677,233 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936548 | 3,213,466 - 3,599,425 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936548 | 3,213,305 - 3,599,876 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SOX5 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 5 | 49,504,551 - 50,161,558 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 49,159,950 - 50,166,463 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 53,008,491 - 53,806,316 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SOX5 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 11 | 23,298,622 - 24,131,712 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 23,303,325 - 23,715,492 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666069 | 10,803,456 - 11,833,677 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Sox5 (Heterocephalus glaber - naked mole-rat) |
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