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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to antibiotic
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Accession:GO:0071236 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antibiotic stimulus. An antibiotic is a chemical substance produced by a microorganism which has the capacity to inhibit the growth of or to kill other microorganisms.



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cellular response to antibiotic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP puromycin RGD PMID:14675146 RGD:8657126 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Atp7a ATPase copper transporting alpha IEP mithramycin RGD PMID:23814049 RGD:11341692 NCBI chr  X:71,094,144...71,201,550
Ensembl chr  X:71,094,202...71,198,354
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B acts_upstream_of_or_within ISO (MGI:3820325|PMID:19056892) RGD PMID:19056892 MGI:3820325 NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
JBrowse link
G Crip1 cysteine rich protein 1 involved_in ISO
ISS
(PMID:20415737) RGD PMID:20415737 PMID:20415737 RGD:8553326 NCBI chr 6:132,226,746...132,234,620
Ensembl chr 6:132,226,746...132,234,620
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP Triclosan RGD PMID:18655822 RGD:4777466 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP Triclosan RGD PMID:18655822 RGD:4777466 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Egr1 early growth response 1 IEP trichostatin A RGD PMID:21490970 RGD:5131646 NCBI chr18:26,463,333...26,465,531
Ensembl chr18:26,462,981...26,466,766
JBrowse link
G Ep300 E1A binding protein p300 IEP RGD PMID:22562121 RGD:7327216 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Hmbs hydroxymethylbilane synthase IEP ascofuranone RGD PMID:19688726 RGD:4144778 NCBI chr 8:44,673,554...44,680,950
Ensembl chr 8:44,673,554...44,680,957
JBrowse link
G Hsd17b3 hydroxysteroid (17-beta) dehydrogenase 3 IEP Triclosan RGD PMID:18655822 RGD:4777466 NCBI chr17:1,027,229...1,058,554
Ensembl chr17:1,027,229...1,058,554
JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP Triclosan RGD PMID:18655822 RGD:4777466 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 IEP tunicamycin RGD PMID:19332540 RGD:7242708 NCBI chr 3:18,055,507...18,059,969
Ensembl chr 3:18,055,405...18,059,891
JBrowse link
G Il1b interleukin 1 beta IEP tigecycline RGD PMID:23200736 RGD:7175528 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Mdm2 MDM2 proto-oncogene IEP chemotherapeutic anthracycline Adriamycin; novel Mdm2 splice variant RGD PMID:18469520 RGD:2317371 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3709446|PMID:17293613)
Ensembl
RGD
PMID:17293613 GO_REF:0000107 MGI:3709446 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266
JBrowse link
G Pla2g4f phospholipase A2, group IVF acts_upstream_of_or_within ISO (MGI:3709446|PMID:17293613) RGD PMID:17293613 MGI:3709446 NCBI chr 3:107,249,053...107,266,201
Ensembl chr 3:107,250,075...107,264,689
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A IEP tunicamycin RGD PMID:21925170 RGD:9999170 NCBI chr 1:96,000,053...96,003,128
Ensembl chr 1:96,000,058...96,003,171
JBrowse link
G Rab10 RAB10, member RAS oncogene family IEP brefeldin A RGD PMID:7688123 RGD:734514 NCBI chr 6:26,267,081...26,319,739
Ensembl chr 6:26,266,859...26,320,193
JBrowse link
G Rasgrf1 RAS protein-specific guanine nucleotide-releasing factor 1 IEP RGD PMID:19002579 RGD:10003129 NCBI chr 8:90,445,154...90,574,274
Ensembl chr 8:90,445,154...90,574,269
JBrowse link
G Scn3a sodium voltage-gated channel alpha subunit 3 IDA tunicamycin RGD PMID:18839021 RGD:2317318 NCBI chr 3:50,146,411...50,258,119
Ensembl chr 3:50,148,139...50,258,119
JBrowse link
G Sirt1 sirtuin 1 IEP ionomycin RGD PMID:17581637 RGD:2290573 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Slc9a1 solute carrier family 9 member A1 IEP oligomycin RGD PMID:20868366 RGD:7349316 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Star steroidogenic acute regulatory protein IEP Triclosan RGD PMID:18655822 RGD:4777466 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Txn1 thioredoxin 1 IEP minocycline RGD PMID:21184825 RGD:5133706 NCBI chr 5:72,712,334...72,724,564
Ensembl chr 5:72,711,933...72,724,629
JBrowse link
G Xbp1 X-box binding protein 1 IEP tunicamycin RGD PMID:19332540 RGD:7242708 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
cellular response to actinomycin D term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
cellular response to trichostatin A term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 IEP RGD PMID:12445420 RGD:632492 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
JBrowse link
G Actr3 actin related protein 3 IEP RGD PMID:12445420 RGD:632492 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Ep300 E1A binding protein p300 IEP RGD PMID:20094059 RGD:7364756 NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (MGI:5576864|PMID:24137001) RGD PMID:24137001 MGI:5576864 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Hdac2 histone deacetylase 2 acts_upstream_of_or_within ISO (MGI:5576864|PMID:24137001) RGD PMID:24137001 MGI:5576864 NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
JBrowse link
G Hdac8 histone deacetylase 8 IDA RGD PMID:26391271 RGD:11344521 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:4440396|PMID:20181743)
UniProt
RGD
PMID:20181743 GO_REF:0000024 MGI:4440396 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mir208b microRNA 208b acts_upstream_of_or_within ISO (MGI:5576864|PMID:24137001) RGD PMID:24137001 MGI:5576864 NCBI chr15:28,451,638...28,451,749
Ensembl chr15:28,451,638...28,451,749
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  biological_process 19504
    response to stimulus 10363
      response to chemical 6194
        response to antibiotic 98
          cellular response to antibiotic 35
            cellular response to actinomycin D 4
            cellular response to bacteriocin 0
            cellular response to brefeldin A 0
            cellular response to streptomycin 0
            cellular response to trichostatin A 8
paths to the root