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parallel fiber to Purkinje cell synapse - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:parallel fiber to Purkinje cell synapse
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Accession:GO:0098688 term browser browse the term
Definition:An excitatory synapse formed by the parallel fibers of granule cells synapsing onto the dendrites of Purkinje cells.

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parallel fiber to Purkinje cell synapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 is_active_in IDA PMID:17183553 SynGO PMID:17183553 RGD:13702242 NCBI chr 4:148,450,207...148,763,653
Ensembl chr 4:146,896,332...147,140,665 		JBrowse link
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 located_in
is_active_in		 IDA PMID:17183553 UniProt
SynGO		 PMID:17183553 PMID:17183553 RGD:13702242, RGD:13702242 NCBI chr  X:156,367,582...156,464,085
Ensembl chr  X:151,216,507...151,286,775 		JBrowse link
G Cadm3 cell adhesion molecule 3 is_active_in ISO (PMID:15741237) RGD PMID:15741237 NCBI chr13:88,317,124...88,349,718
Ensembl chr13:85,786,483...85,817,749 		JBrowse link
G Cadps2 calcium dependent secretion activator 2 is_active_in ISO
IEA		 (PMID:14715936)
GO_REF:0000107		 RGD
Ensembl		 PMID:14715936 GO_REF:0000107 NCBI chr 4:52,746,054...53,275,252
Ensembl chr 4:51,781,053...52,309,829 		JBrowse link
G Calb2 calbindin 2 is_active_in ISO
ISS		 (PMID:23273895)
GO_REF:0000024		 RGD
UniProt		 PMID:23273895 GO_REF:0000024 NCBI chr19:38,114,435...38,141,438
Ensembl chr19:38,114,424...38,141,438 		JBrowse link
G Cbln1 cerebellin 1 precursor is_active_in ISO
IEA		 (PMID:19250438)
GO_REF:0000107		 RGD
Ensembl		 PMID:19250438 GO_REF:0000107 NCBI chr19:35,782,151...35,785,960
Ensembl chr19:19,608,716...19,612,572 		JBrowse link
G Cbln3 cerebellin 3 precursor is_active_in ISO
IEA		 (PMID:17331201)
GO_REF:0000107		 RGD
Ensembl		 PMID:17331201 GO_REF:0000107 NCBI chr15:33,331,919...33,334,428
Ensembl chr15:29,362,302...29,364,612 		JBrowse link
G Cntn6 contactin 6 is_active_in ISO (PMID:19672956) RGD PMID:19672956 NCBI chr 4:138,911,090...139,307,339
Ensembl chr 4:137,355,367...137,751,119 		JBrowse link
G Ctnna2 catenin alpha 2 is_active_in ISO (PMID:8909549) RGD PMID:8909549 NCBI chr 4:110,852,265...112,001,351
Ensembl chr 4:109,293,978...110,443,522 		JBrowse link
G Epb41l1 erythrocyte membrane protein band 4.1-like 1 is_active_in IDA PMID:17335044 SynGO PMID:17335044 RGD:405650311 NCBI chr 3:144,929,195...145,052,723
Ensembl chr 3:144,984,640...145,052,721 		JBrowse link
G Gnao1 G protein subunit alpha o1 is_active_in ISO
IDA		 (PMID:34248508)
PMID:12837624		 RGD PMID:34248508 PMID:12837624 RGD:405650368 NCBI chr19:11,040,788...11,198,437
Ensembl chr19:11,035,956...11,192,493 		JBrowse link
G Gnb2 G protein subunit beta 2 is_active_in IDA PMID:12837624 SynGO PMID:12837624 RGD:405650368 NCBI chr12:24,795,505...24,800,796
Ensembl chr12:19,158,973...19,164,019 		JBrowse link
G Gnb5 G protein subunit beta 5 is_active_in ISO
IEA		 (PMID:27965545)
GO_REF:0000107		 RGD
Ensembl		 PMID:27965545 GO_REF:0000107 NCBI chr 8:84,956,629...84,985,576
Ensembl chr 8:76,073,306...76,105,069 		JBrowse link
G Gng7 G protein subunit gamma 7 is_active_in IDA PMID:12837624 SynGO PMID:12837624 RGD:405650368 NCBI chr 7:9,348,148...9,411,924
Ensembl chr 7:8,697,521...8,761,240 		JBrowse link
G Gpm6a glycoprotein m6a is_active_in IDA PMID:10447243 SynGO PMID:10447243 RGD:155230692 NCBI chr16:43,374,385...43,706,461
Ensembl chr16:36,641,284...36,973,475 		JBrowse link
G Gria3 glutamate ionotropic receptor AMPA type subunit 3 is_active_in ISO
IEA		 (PMID:28103481)
GO_REF:0000107		 RGD
Ensembl		 PMID:28103481 GO_REF:0000107 NCBI chr  X:125,103,975...125,369,690
Ensembl chr  X:120,238,534...120,504,096 		JBrowse link
G Grid2 glutamate ionotropic receptor delta type subunit 2 is_active_in IDA
ISO
IEA		 PMID:8987804
(PMID:20395510)
GO_REF:0000107		 RGD
Ensembl		 PMID:20395510 PMID:8987804 GO_REF:0000107, RGD:2303500 NCBI chr 4:93,745,165...95,222,354
Ensembl chr 4:92,415,230...93,889,355 		JBrowse link
G Grid2ip Grid2 interacting protein is_active_in ISO
IEA		 (PMID:11826110)
GO_REF:0000107		 RGD
Ensembl		 PMID:11826110 GO_REF:0000107 NCBI chr12:16,274,809...16,317,319
Ensembl chr12:11,167,874...11,203,676 		JBrowse link
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 is_active_in IDA PMID:19666514 SynGO PMID:19666514 RGD:2325961 NCBI chr 3:28,501,836...28,528,754
Ensembl chr 3:8,103,680...8,130,603 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A is_active_in IDA PMID:19666514 SynGO PMID:19666514 RGD:2325961 NCBI chr10:6,136,458...6,560,003
Ensembl chr10:5,631,369...6,044,637 		JBrowse link
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B is_active_in IDA PMID:19666514 SynGO PMID:19666514 RGD:2325961 NCBI chr 4:170,297,811...170,775,420
Ensembl chr 4:168,599,546...169,042,279 		JBrowse link
G Grm4 glutamate metabotropic receptor 4 is_active_in ISO (PMID:8815915) RGD PMID:8815915 NCBI chr20:5,486,024...5,574,668
Ensembl chr20:5,481,124...5,572,821 		JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 is_active_in ISO (PMID:25556795) RGD PMID:25556795 NCBI chr13:106,253,101...106,555,712
Ensembl chr13:103,722,245...104,024,740 		JBrowse link
G Kcnj3 potassium inwardly-rectifying channel, subfamily J, member 3 is_active_in ISO
IEA		 (PMID:19558451)
GO_REF:0000107		 RGD
Ensembl		 PMID:19558451 GO_REF:0000107 NCBI chr 3:60,353,990...60,518,110
Ensembl chr 3:39,945,351...40,109,124 		JBrowse link
G Kcnj6 potassium inwardly-rectifying channel, subfamily J, member 6 is_active_in ISO (PMID:19558451) RGD PMID:19558451 NCBI chr11:47,531,312...47,778,348
Ensembl chr11:34,061,708...34,308,758 		JBrowse link
G Kcnj9 potassium inwardly-rectifying channel, subfamily J, member 9 is_active_in ISO
IEA		 (PMID:19558451)
GO_REF:0000107		 RGD
Ensembl		 PMID:19558451 GO_REF:0000107 NCBI chr13:87,313,191...87,320,293
Ensembl chr13:84,779,741...84,787,928 		JBrowse link
G Mgll monoglyceride lipase is_active_in ISO
IEA		 (PMID:22783023)
GO_REF:0000107		 RGD
Ensembl		 PMID:22783023 GO_REF:0000107 NCBI chr 4:122,749,436...122,851,440
Ensembl chr 4:121,192,195...121,294,179 		JBrowse link
G P2rx2 purinergic receptor P2X 2 is_active_in IDA PMID:11160443 SynGO PMID:11160443 RGD:1642669 NCBI chr12:51,999,107...52,002,627
Ensembl chr12:46,339,549...46,342,891 		JBrowse link
G P2rx4 purinergic receptor P2X 4 is_active_in IDA PMID:11160443 SynGO PMID:11160443 RGD:1642669 NCBI chr12:39,505,438...39,523,349
Ensembl chr12:33,844,396...33,862,253 		JBrowse link
G P2rx6 purinergic receptor P2X 6 is_active_in IDA PMID:11160443 SynGO PMID:11160443 RGD:1642669 NCBI chr11:96,944,167...96,956,424
Ensembl chr11:83,439,924...83,450,481 		JBrowse link
G Pclo piccolo (presynaptic cytomatrix protein) is_active_in IDA PMID:21712437 SynGO PMID:21712437 RGD:9850098 NCBI chr 4:20,646,604...21,005,171
Ensembl chr 4:19,695,315...20,049,885 		JBrowse link
G Pfn1 profilin 1 is_active_in IDA PMID:15654839 SynGO PMID:15654839 RGD:13702446 NCBI chr10:55,863,882...55,866,587
Ensembl chr10:55,365,262...55,527,631 		JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein is_active_in IDA PMID:15558718 SynGO PMID:15558718 RGD:1600759 NCBI chr 1:153,468,982...153,550,086
Ensembl chr 1:144,056,721...144,137,557 		JBrowse link
G Plcb4 phospholipase C, beta 4 is_active_in ISO
IEA		 (PMID:11551922)
GO_REF:0000107		 RGD
Ensembl		 PMID:11551922 GO_REF:0000107 NCBI chr 3:143,405,721...143,775,129
Ensembl chr 3:122,953,196...123,322,392 		JBrowse link
G Ppfia4 PTPRF interacting protein alpha 4 is_active_in ISO
IEA		 (PMID:21618222)
GO_REF:0000107		 RGD
Ensembl		 PMID:21618222 GO_REF:0000107 NCBI chr13:48,305,844...48,354,329
Ensembl chr13:45,753,827...45,802,261 		JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha is_active_in ISO (PMID:20797538) RGD PMID:20797538 NCBI chr14:95,758,333...95,808,015
Ensembl chr14:91,604,121...91,606,907 		JBrowse link
G Scn8a sodium voltage-gated channel alpha subunit 8 is_active_in IDA PMID:10779552 SynGO PMID:10779552 RGD:13702270 NCBI chr 7:133,860,901...134,034,809
Ensembl chr 7:131,982,480...132,151,292 		JBrowse link
G Slc16a7 solute carrier family 16 member 7 is_active_in IDA PMID:15749979 SynGO PMID:15749979 RGD:13702297 NCBI chr 7:62,929,067...63,096,995
Ensembl chr 7:61,051,167...61,154,994 		JBrowse link
G Slc1a6 solute carrier family 1 member 6 is_active_in IDA PMID:9570792 SynGO PMID:9570792 RGD:13702209 NCBI chr 7:10,841,836...10,870,424
Ensembl chr 7:10,841,837...10,870,449 		JBrowse link
G Slc6a9 solute carrier family 6 member 9 is_active_in IDA PMID:15749988 SynGO PMID:15749988 RGD:13702293 NCBI chr 5:136,660,022...136,694,173
Ensembl chr 5:131,374,542...131,408,728 		JBrowse link
G Snap91 synaptosome associated protein 91 is_active_in IDA PMID:15558718 SynGO PMID:15558718 RGD:1600759 NCBI chr 8:96,618,039...96,732,763
Ensembl chr 8:87,738,824...87,852,367 		JBrowse link
G Sptbn2 spectrin, beta, non-erythrocytic 2 is_active_in ISO
IEA		 (PMID:22090485)
GO_REF:0000107		 RGD
Ensembl		 PMID:22090485 GO_REF:0000107 NCBI chr 1:211,432,373...211,473,016
Ensembl chr 1:202,002,970...202,044,283 		JBrowse link
G Stxbp1 syntaxin binding protein 1 is_active_in ISO
IEA		 (PMID:32494600)
GO_REF:0000107		 RGD
Ensembl		 PMID:32494600 GO_REF:0000107 NCBI chr 3:36,474,428...36,536,120
Ensembl chr 3:16,076,391...16,138,369 		JBrowse link
G Susd4 sushi domain containing 4 is_active_in ISO (PMID:33661101) RGD PMID:33661101 NCBI chr13:96,982,867...97,109,419
Ensembl chr13:94,455,165...94,577,750 		JBrowse link
G Synj1 synaptojanin 1 is_active_in IDA PMID:7982917 SynGO PMID:7982917 RGD:13702441 NCBI chr11:43,678,709...43,755,526
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
G Tmem240 transmembrane protein 240 is_active_in ISO (PMID:32002801) RGD PMID:32002801 NCBI chr 5:171,625,830...171,653,836
Ensembl chr 5:166,344,386...166,350,636 		JBrowse link
G Unc13c unc-13 homolog C is_active_in ISO
IEA		 (PMID:11150314)
GO_REF:0000107		 RGD
Ensembl		 PMID:11150314 GO_REF:0000107 NCBI chr 8:83,127,650...83,553,822
Ensembl chr 8:74,247,899...74,673,223 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21366
    cellular anatomical structure 21071
      cell junction 2607
        synapse 2002
          excitatory synapse 107
            parallel fiber to Purkinje cell synapse 47
paths to the root