Gene: Ppfia4 (PTPRF interacting protein alpha 4) Rattus norvegicus
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Symbol: Ppfia4
Name: PTPRF interacting protein alpha 4
Description: ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN synapse (ortholog); INTERACTS WITH 2,6-dinitrotoluene; acrylamide; ammonium chloride
AGR Description: Predicted to localize to the synapse; orthologous to human PPFIA4 (PTPRF interacting protein alpha 4).
Merged Description: Predicted to localize to the synapse; orthologous to human PPFIA4 (PTPRF interacting protein alpha 4); INTERACTS WITH 2,6-dinitrotoluene; acrylamide; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: hypothetical protein LOC685423; liprin-alpha-4; LOC685423; protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-4; protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4; PTPRF-interacting protein alpha-4
Orthologs:
Homo sapiens (human) : PPFIA4 (PTPRF interacting protein alpha 4)  HGNC  Alliance
Mus musculus (house mouse) : Ppfia4 (protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ppfia4 (PTPRF interacting protein alpha 4)
Pan paniscus (bonobo/pygmy chimpanzee) : PPFIA4 (PTPRF interacting protein alpha 4)
Canis lupus familiaris (dog) : PPFIA4 (PTPRF interacting protein alpha 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ppfia4 (PTPRF interacting protein alpha 4)
Sus scrofa (pig) : PPFIA4 (PTPRF interacting protein alpha 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01351,134,831 - 51,183,321 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01356,191,119 - 56,239,610 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41347,252,084 - 47,300,744 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11347,266,851 - 47,298,660 (-)NCBI
Celera1346,081,944 - 46,130,233 (-)NCBICelera
Cytogenetic Map13q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
  
More on Ppfia4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620055
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-04-12
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.