Gene: Cntn6 (contactin 6) Rattus norvegicus
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Symbol: Cntn6
Name: contactin 6
Description: ENCODES a protein that exhibits Notch binding (inferred); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autistic disorder (ortholog); FOUND IN anchored component of presynaptic membrane (ortholog); parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); INTERACTS WITH 2,2',4,4'-Tetrabromodiphenyl ether; ammonium chloride; bisphenol A
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: contactin-6; NB-3; neural adhesion molecule; neural recognition molecule NB-3
Orthologs:
Homo sapiens (human) : CNTN6 (contactin 6)  HGNC  Alliance
Mus musculus (house mouse) : Cntn6 (contactin 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Cntn6 (contactin 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CNTN6 (contactin 6)
Canis lupus familiaris (dog) : CNTN6 (contactin 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Cntn6 (contactin 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.04136,512,201 - 136,904,355 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04200,983,505 - 201,373,876 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44140,078,007 - 140,450,348 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14140,322,847 - 140,695,189 (+)NCBI
Celera4126,104,412 - 126,491,956 (+)NCBICelera
Cytogenetic Map4q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Cntn6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 62008
Created: 2001-04-11
Species: Rattus norvegicus
Last Modified: 2018-10-09
Status: ACTIVE