Advanced Search (OLGA)

Gene: P2rx2 (purinergic receptor P2X 2) Rattus norvegicus

Analyze

Symbol:

P2rx2

Name:

purinergic receptor P2X 2

RGD ID:

620251

Description:

Enables several functions, including anion binding activity; extracellularly ATP-gated monoatomic cation channel activity; and transition metal ion binding activity. Involved in several processes, including neuronal action potential; regulation of presynaptic cytosolic calcium ion concentration; and response to ischemia. Located in several cellular components, including dendritic spine; neuronal cell body; and presynaptic membrane. Part of receptor complex. Is active in several cellular components, including Schaffer collateral - CA1 synapse; parallel fiber to Purkinje cell synapse; and synaptic membrane. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 41. Orthologous to human P2RX2 (purinergic receptor P2X 2); PARTICIPATES IN calcium/calcium-mediated signaling pathway; INTERACTS WITH 1,4-dithiothreitol; 6-propyl-2-thiouracil; 9-cis-retinoic acid.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

ATP receptor; P2X purinoceptor 2; P2X2; purinergic receptor P2X, ligand-gated ion channel, 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	51,999,107 - 52,002,627 (+)	NCBI		GRCr8
mRatBN7.2	12	46,338,979 - 46,342,891 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	46,339,549 - 46,342,891 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	47,515,324 - 47,518,520 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	48,120,973 - 48,124,163 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	47,181,498 - 47,184,688 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	52,397,666 - 52,401,005 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	52,397,792 - 52,401,015 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	54,133,143 - 54,136,379 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	46,485,125 - 46,488,319 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	46,352,056 - 46,355,251 (+)	NCBI
Celera	12	47,896,140 - 47,899,334 (+)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant nonsyndromic deafness (ISO)

autosomal dominant nonsyndromic deafness 41 (ISO,ISS)

colorectal cancer (ISO)

epilepsy (ISO)

Hyperalgesia (ISO)

sensorineural hearing loss (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

1,4-dithiothreitol (EXP)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

9-cis-retinoic acid (EXP)

acrylamide (EXP)

aldehydo-D-glucose (ISO)

all-trans-retinoic acid (EXP)

alpha-Zearalanol (EXP)

ammonium chloride (EXP)

aristolochic acid A (ISO)

ATP (EXP,ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP)

bisphenol A (EXP,ISO)

C60 fullerene (EXP)

cadmium dichloride (EXP)

cobalt dichloride (EXP)

copper atom (EXP)

copper(0) (EXP)

copper(II) chloride (EXP)

D-glucose (ISO)

dexamethasone (ISO)

doxorubicin (ISO)

fenvalerate (EXP)

fructose (ISO)

glucose (ISO)

hydrogen peroxide (EXP)

indometacin (ISO)

L-1,4-dithiothreitol (EXP)

mercury atom (EXP)

mercury dichloride (EXP)

mercury(0) (EXP)

methotrexate (ISO)

myxothiazol (EXP)

N-acetyl-L-cysteine (EXP)

N-methyl-4-phenylpyridinium (ISO)

nickel dichloride (EXP)

Nonylphenol (EXP)

palladium(II) chloride (EXP)

paracetamol (EXP)

perfluorooctanoic acid (EXP)

quercitrin (ISO)

resveratrol (ISO)

rotenone (EXP)

S-methyl methanethiosulfonate (EXP)

streptozocin (ISO)

suramin (EXP)

tetrachloromethane (EXP)

TNP-ATP (EXP)

trichloroethene (EXP)

triptonide (ISO)

urethane (ISO)

valproic acid (ISO)

zinc atom (EXP)

zinc dichloride (EXP)

zinc(0) (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

behavioral response to pain (IEA,ISO)

calcium ion transmembrane transport (IBA)

chemical synaptic transmission (ISO)

detection of hypoxic conditions in blood by carotid body chemoreceptor signaling (IEA,ISO)

excitatory postsynaptic potential (IEA)

monoatomic cation transmembrane transport (IEA)

neuromuscular junction development (IEA,ISO)

neuromuscular synaptic transmission (IEA,ISO)

neuronal action potential (IDA,IMP)

peristalsis (IEA,ISO)

purinergic nucleotide receptor signaling pathway (IEA)

regulation of presynaptic cytosolic calcium ion concentration (EXP,IDA,IEP)

regulation of synaptic vesicle exocytosis (EXP,IDA,IEP)

response to ATP (IEA,ISO)

response to carbohydrate (IEA,ISO)

response to hypoxia (IEA,ISO)

response to ischemia (IMP)

sensory perception of sound (IEA,ISO)

sensory perception of taste (IEA,ISO)

skeletal muscle fiber development (IEA,ISO)

urinary bladder smooth muscle contraction (IEA,ISO)

Cellular Component

apical plasma membrane (IEA,ISO)

cell surface (IDA)

dendritic spine (IDA)

glutamatergic synapse (EXP,IDA,IEP)

neuronal cell body (IDA)

neuronal dense core vesicle (IEA,ISO)

parallel fiber to Purkinje cell synapse (IDA)

plasma membrane (IBA,IDA,IEA,ISO)

postsynapse (IEA)

postsynaptic density membrane (IDA)

presynaptic active zone membrane (IDA,IEP)

presynaptic membrane (IDA)

receptor complex (IBA,IDA,IEA,ISO)

Schaffer collateral - CA1 synapse (IDA)

terminal bouton (IDA)

Molecular Function

ATP binding (IDA,IEA)

cadmium ion binding (IDA)

cobalt ion binding (IDA)

copper ion binding (IDA)

extracellularly ATP-gated monoatomic cation channel activity (IBA,IDA,IEA,IMP,ISO)

identical protein binding (IEA,IPI,ISO)

ligand-gated monoatomic ion channel activity (IDA)

mercury ion binding (IDA)

nickel cation binding (IDA)

phosphatidylinositol binding (IMP)

protein binding (IPI)

protein-containing complex binding (IDA)

purinergic nucleotide receptor activity (IEA)

zinc ion binding (IDA)

Molecular Pathway Annotations Click to see Annotation Detail View

calcium/calcium-mediated signaling pathway (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Identification of P2X2/P2X4/P2X6 heterotrimeric receptors using atomic force microscopy (AFM) imaging.	Antonio LS, etal., FEBS Lett. 2014 Jun 5;588(12):2125-8. doi: 10.1016/j.febslet.2014.04.048. Epub 2014 May 8.
2.	Trimeric architecture of homomeric P2X2 and heteromeric P2X1+2 receptor subtypes.	Aschrafi A, etal., J Mol Biol. 2004 Sep 3;342(1):333-43.
3.	P2X(2) receptor immunoreactivity in the dorsal vagal complex and area postrema of the rat.	Atkinson L, etal., Neuroscience. 2000;99(4):683-96.
4.	The stoichiometry of P2X2/6 receptor heteromers depends on relative subunit expression levels.	Barrera NP, etal., Biophys J. 2007 Jul 15;93(2):505-12. Epub 2007 Apr 20.
5.	New structural motif for ligand-gated ion channels defined by an ionotropic ATP receptor.	Brake AJ, etal., Nature 1994 Oct 6;371(6497):519-23.
6.	Up-regulation of P2X2, P2X4 receptor and ischemic cell death: prevention by P2 antagonists.	Cavaliere F, etal., Neuroscience. 2003;120(1):85-98.
7.	Cerebellar lesion up-regulates P2X1 and P2X2 purinergic receptors in precerebellar nuclei.	Florenzano F, etal., Neuroscience 2002;115(2):425-34.
8.	Regulation of the desensitization and ion selectivity of ATP-gated P2X2 channels by phosphoinositides.	Fujiwara Y and Kubo Y, J Physiol. 2006 Oct 1;576(Pt 1):135-49. Epub 2006 Jul 20.
9.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
10.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
11.	Identification of a short form of the P2xR1-purinoceptor subunit produced by alternative splicing in the pituitary and cochlea.	Housley GD, etal., Biochem Biophys Res Commun 1995 Jul 17;212(2):501-8.
12.	Gain and loss of channel function by alanine substitutions in the transmembrane segments of the rat ATP-gated P2X2 receptor.	Li Z, etal., J Neurosci. 2004 Aug 18;24(33):7378-86.
13.	Coexpression of P2X(3) and P2X(2) receptor subunits in varying amounts generates heterogeneous populations of P2X receptors that evoke a spectrum of agonist responses comparable to that seen in sensory neurons.	Liu M, etal., J Pharmacol Exp Ther. 2001 Mar;296(3):1043-50.
14.	Extracellular histidine residues identify common structural determinants in the copper/zinc P2X2 receptor modulation.	Lorca RA, etal., J Neurochem. 2005 Oct;95(2):499-512.
15.	Characterization of three types of ATP-activated current in relation to P2X subunits in rat trigeminal ganglion neurons.	Luo J, etal., Brain Res. 2006 Oct 18;1115(1):9-15. Epub 2006 Aug 24.
16.	Fe65 interacts with P2X2 subunits at excitatory synapses and modulates receptor function.	Masin M, etal., J Biol Chem. 2006 Feb 17;281(7):4100-8. Epub 2005 Dec 5.
17.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
18.	Reconstruction of the P2X(2) receptor reveals a vase-shaped structure with lateral tunnels above the membrane.	Mio K, etal., Structure. 2009 Feb 13;17(2):266-75. doi: 10.1016/j.str.2008.12.007.
19.	Electronic Transfer of LocusLink and RefSeq Data	NCBI rat LocusLink and RefSeq merged data July 26, 2002
20.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
21.	KEGG Annotation Import Pipeline	Pipeline to import KEGG annotations from KEGG into RGD
22.	GOA pipeline	RGD automated data pipeline
23.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
24.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
25.	Dual presynaptic control by ATP of glutamate release via facilitatory P2X1, P2X2/3, and P2X3 and inhibitory P2Y1, P2Y2, and/or P2Y4 receptors in the rat hippocampus.	Rodrigues RJ, etal., J Neurosci. 2005 Jul 6;25(27):6286-95.
26.	Distinct Localization of P2X receptors at excitatory postsynaptic specializations.	Rubio ME and Soto F, J Neurosci. 2001 Jan 15;21(2):641-53.
27.	P2X2 receptor subunit expression in a subpopulation of cochlear type I spiral ganglion neurones.	Salih SG, etal., Neuroreport 1998 Jan 26;9(2):279-82.
28.	A histidine scan to probe the flexibility of the rat P2X2 receptor zinc-binding site.	Tittle RK, etal., J Biol Chem. 2007 Jul 6;282(27):19526-33. Epub 2007 May 21.
29.	Evidence for three additional P2X2 purinoceptor isoforms produced by alternative splicing in the adult rat vestibular end-organs.	Troyanovskaya M and Wackym PA, Hear Res 1998 Dec;126(1-2):201-9.
30.	Inhibition mechanism of the recombinant rat P2X(2) receptor in glial cells by suramin and TNP-ATP.	Trujillo CA, etal., Biochemistry. 2006 Jan 10;45(1):224-33.
31.	Role of the domain encompassing Arg304-Ile328 in rat P2X2 receptor conformation revealed by alterations in complex glycosylation at Asn298.	Young MT, etal., Biochem J. 2008 Nov 15;416(1):137-43. doi: 10.1042/BJ20081182.

Additional References at PubMed

PMID:9119082	PMID:12604087	PMID:12788520	PMID:12844512	PMID:12850289	PMID:12858039	PMID:12878756	PMID:12917379	PMID:12921863	PMID:12937291	PMID:14672995	PMID:15081800
PMID:15107474	PMID:15126501	PMID:15228593	PMID:15456793	PMID:15572362	PMID:15657042	PMID:15899882	PMID:15905416	PMID:15947072	PMID:15961431	PMID:15973739	PMID:16033901
PMID:16219297	PMID:16322458	PMID:16753051	PMID:17329369	PMID:17664346	PMID:17706883	PMID:17917716	PMID:17959738	PMID:18048351	PMID:18565509	PMID:19064335	PMID:19266560
PMID:19383439	PMID:19625689	PMID:19752115	PMID:19906973	PMID:20308075	PMID:20406659	PMID:20617399	PMID:20677337	PMID:20705122	PMID:20736052	PMID:20860800	PMID:20868656
PMID:21051571	PMID:21191044	PMID:21303687	PMID:21409380	PMID:21907716	PMID:22038573	PMID:22090499	PMID:22422599	PMID:22556417	PMID:22621423	PMID:23345450	PMID:23382219
PMID:23936459	PMID:24515105	PMID:24798490	PMID:24863932	PMID:25172943	PMID:25680470	PMID:26808983	PMID:26843630	PMID:29608947	PMID:32145326

Genomics

Comparative Map Data

P2rx2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	51,999,107 - 52,002,627 (+)	NCBI		GRCr8
mRatBN7.2	12	46,338,979 - 46,342,891 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	46,339,549 - 46,342,891 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	47,515,324 - 47,518,520 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	48,120,973 - 48,124,163 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	47,181,498 - 47,184,688 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	52,397,666 - 52,401,005 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	52,397,792 - 52,401,015 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	54,133,143 - 54,136,379 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	46,485,125 - 46,488,319 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	46,352,056 - 46,355,251 (+)	NCBI
Celera	12	47,896,140 - 47,899,334 (+)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

P2RX2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	132,618,776 - 132,622,388 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	132,618,776 - 132,622,388 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	133,195,362 - 133,198,974 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	131,705,476 - 131,709,045 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	131,805,752 - 131,809,322	NCBI
Celera	12	132,895,833 - 132,898,704 (+)	NCBI		Celera
Cytogenetic Map	12	q24.33	NCBI
HuRef	12	129,940,850 - 129,978,664 (+)	NCBI		HuRef
CHM1_1	12	133,014,978 - 133,018,311 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	132,668,996 - 132,672,547 (+)	NCBI		T2T-CHM13v2.0

P2rx2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	110,487,678 - 110,491,186 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	110,487,678 - 110,491,078 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	110,339,812 - 110,343,320 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	110,339,812 - 110,343,212 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	110,768,831 - 110,772,054 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	110,580,114 - 110,583,514 (-)	NCBI		MGSCv36	mm8
Celera	5	107,464,481 - 107,467,704 (-)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	53.49	NCBI

P2rx2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955482	419,213 - 421,583 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955482	418,101 - 422,058 (-)	NCBI	ChiLan1.0	ChiLan1.0

P2RX2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	140,727,913 - 140,732,757 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	140,724,426 - 140,729,274 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	129,969,793 - 129,974,399 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	134,679,826 - 134,694,613 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

P2RX2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	480,370 - 485,527 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	482,425 - 485,502 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	521,018 - 527,367 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	537,116 - 543,463 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	540,383 - 543,463 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	480,971 - 484,056 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	565,312 - 571,661 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	496,140 - 502,489 (-)	NCBI		UU_Cfam_GSD_1.0

P2rx2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	122,147,514 - 122,150,459 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936660	2,570,625 - 2,573,296 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936660	2,570,627 - 2,574,081 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

P2RX2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	22,854,828 - 22,858,386 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	22,854,828 - 22,858,574 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	24,390,356 - 24,393,061 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

P2RX2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	127,961,004 - 127,964,529 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	127,961,079 - 127,964,113 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	116,903,349 - 116,907,655 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

P2rx2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	28,020,652 - 28,023,392 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	28,019,305 - 28,023,558 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in P2rx2
15 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	286
Count of miRNA genes:	163
Interacting mature miRNAs:	178
Transcripts:	ENSRNOT00000056692, ENSRNOT00000056693, ENSRNOT00000056694
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2293699	Bss49	Bone structure and strength QTL 49	5.61	0.0001	lumbar vertebra size trait (VT:0010518)	lumbar vertebra trabecular cross-sectional area (CMO:0001692)	12	10474137	46669029	Rat
631560	Apr1	Acute phase response QTL 1	6.1		orosomucoid 1 amount (VT:0010541)	plasma orosomucoid 1 level (CMO:0001467)	12	19144362	46669029	Rat
8552964	Pigfal17	Plasma insulin-like growth factor 1 level QTL 17	3.5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
7411641	Foco19	Food consumption QTL 19	27.7	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
7411547	Bw129	Body weight QTL 129		0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	6	5564495	46669029	Rat
7411643	Foco20	Food consumption QTL 20		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	20328819	46669029	Rat
61324	Eae5	Experimental allergic encephalomyelitis QTL 5	14		nervous system integrity trait (VT:0010566)	percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)	12	19610870	46669029	Rat
1549912	Bp268	Blood pressure QTL 268			arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	10	13182736	46669029	Rat
2302060	Pia37	Pristane induced arthritis QTL 37	6.1	0.001	blood immunoglobulin amount (VT:0002460)	serum immunoglobulin G1 level (CMO:0002115)	12	13198157	46669029	Rat
1641928	Alcrsp5	Alcohol response QTL 5			response to alcohol trait (VT:0010489)	duration of loss of righting reflex (CMO:0002289)	12	12812385	46669029	Rat
8552912	Pigfal6	Plasma insulin-like growth factor 1 level QTL 6	5		blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564498	46669029	Rat
1549829	Scl48	Serum cholesterol level QTL 48	5		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	12	9603277	46669029	Rat
2303569	Gluco44	Glucose level QTL 44	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	12	12812385	46669029	Rat
10059594	Kidm46	Kidney mass QTL 46	3.79	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	12	6107579	46669029	Rat
8552918	Pigfal7	Plasma insulin-like growth factor 1 level QTL 7			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	12	5564495	46669029	Rat
7411588	Foco6	Food consumption QTL 6		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
2300186	Bmd59	Bone mineral density QTL 59	7.1	0.0001	lumbar vertebra mineral mass (VT:0010511)	volumetric bone mineral density (CMO:0001553)	12	10474137	46669029	Rat
1549902	Bp269	Blood pressure QTL 269			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	12	13182736	46669029	Rat
1600386	Calcic2	Intracellular calcium level QTL 2		0.001	platelet physiology trait (VT:0005464)	platelet intracellular calcium level (CMO:0000922)	12	28064433	46669029	Rat
1302792	Scl21	Serum cholesterol level QTL 21	3.8	0.0011	blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	12	7196730	46669029	Rat
7411597	Foco10	Food consumption QTL 10		0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	12	5564495	46669029	Rat
61404	Bw120	Body weight QTL 120	5.1		body mass (VT:0001259)	body mass index (BMI) (CMO:0000105)	12	12351619	46669029	Rat

Markers in Region

RH137980

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	12	46,342,722 - 46,342,867 (+)	MAPPER	mRatBN7.2
Rnor_6.0	12	52,400,837 - 52,400,981	NCBI	Rnor6.0
Rnor_5.0	12	54,136,211 - 54,136,355	UniSTS	Rnor5.0
RGSC_v3.4	12	46,488,151 - 46,488,295	UniSTS	RGSC3.4
Celera	12	47,899,166 - 47,899,310	UniSTS
RH 3.4 Map	12	803.3	UniSTS
Cytogenetic Map	12	q16	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	10	43	113	86	85	54	25	54	6	199	91	93	38	60	31

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_053656	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249515	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249516	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249517	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008769307	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017598236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063270983	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005491585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC120688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF013241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF020756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF020757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF020758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF020759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF028603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF028604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF028605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF064549	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AY749416	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473973	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L43511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	U14414	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Y09910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Y10473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Y10474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Y10475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000056692 ⟹ ENSRNOP00000053531

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	52,397,830 - 52,400,751 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000056693 ⟹ ENSRNOP00000053532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	46,339,717 - 46,342,637 (+)	Ensembl
Rnor_6.0 Ensembl	12	52,397,830 - 52,400,751 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000056694 ⟹ ENSRNOP00000053533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	46,339,549 - 46,342,891 (+)	Ensembl
Rnor_6.0 Ensembl	12	52,397,812 - 52,401,005 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081447 ⟹ ENSRNOP00000073541

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0 Ensembl	12	52,397,847 - 52,400,627 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000085661 ⟹ ENSRNOP00000074992

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	12	46,339,549 - 46,342,891 (+)	Ensembl
Rnor_6.0 Ensembl	12	52,397,792 - 52,401,015 (+)	Ensembl

RefSeq Acc Id:

NM_053656 ⟹ NP_446108

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,433 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,698 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,811 - 52,401,005 (+)	NCBI
Rnor_5.0	12	54,133,143 - 54,136,379 (+)	NCBI
RGSC_v3.4	12	46,485,125 - 46,488,319 (+)	RGD
Celera	12	47,896,140 - 47,899,334 (+)	RGD

Sequence:

show sequence

GCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCGCTTGGCCCGGGGCTGCT
GGTCCGCGTTCTGGGACTACGAGACGCCTAAGGTGATCGTGGTGCGGAATCGGCGCCTGGGATT
CGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTCGTGTGGTACGTCTTCATCGTGCAG
AAAAGCTACCAGGACAGCGAGACCGGACCGGAGAGCTCCATCATCACCAAAGTCAAGGGGATCA
CCATGTCGGAAGACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGCAGTGT
AGTCAGCATCATCACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGAACATGCCCAGAGAGC
ATGAGGGTTCACAGCTCTACCTGCCATTCAGACGACGACTGTATTGCCGGACAGCTGGACATGC
AAGGCAATGGGATTCGCACAGGGCACTGTGTACCCTATTACCATGGGGACTCCAAGACCTGCGA
GGTGTCAGCCTGGTGCCCGGTGGAGGATGGAACTTCTGACAACCATTTTCTGGGTAAAATGGCC
CCAAATTTCACCATCCTCATCAAGAACAGCATCCACTACCCCAAGTTCAAGTTCTCAAAGGGCA
ACATTGCAAGCCAGAAGAGTGACTACCTCAAGCATTGCACATTTGATCAGGACTCTGACCCATA
CTGTCCCATCTTCAGGCTGGGTTTCATTGTTGAGAAGGCAGGAGAGAACTTCACAGAACTGGCA
CACAAGGGCGGTGTCATTGGAGTCATCATCAACTGGAACTGTGACCTGGACTTGTCTGAATCAG
AGTGCAACCCCAAATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTGCCTCCTCAGGCTA
CAACTTCAGGTTTGCCAAGTATTACAAGATAAACGGCACTACCACCACTCGAACTCTCATCAAA
GCCTATGGGATTCGAATCGATGTTATCGTGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCA
CCATCATCAATCTGGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTCCTGTGTGACTGGAT
TTTGTTAACGTTCATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGACAAGGTGCGTACT
CCAAAGCATCCCTCAAGTAGATGGCCTGTGACCCTTGCCCTTGTCTTGGGCCAGATCCCTCCCC
CACCTAGTCACTACTCCCAGGATCAGCCACCCAGCCCTCCATCAGGTGAAGGACCAACTTTGGG
AGAAGGGGCAGAGCTACCACTGGCTGTCCAGTCTCCTCGGCCTTGCTCCATCTCTGCTCTGACT
GAGCAGGTGGTGGACACACTTGGCCAGCATATGGGACAAAGACCTCCTGTCCCTGAGCCTTCCC
AACAGGACTCCACATCCACGGACCCCAAAGGTTTGGCCCAACTTTGATCTCATCCTCACTAAAC
TACAGACCTGGACCTGGGAAGGCAGAGACAGCTTTGGCTGCTAAGGCAGTCCTAGAGAAGATCT
GCGCTCTTCAGTAACCATGTCCATGTGACTGGGAAACAGAAACCTGTGCAAGAGGACAGGCGTC
TTGCTTTAGCCCAAGCTTACATTCTTCCTCTCCCTAAGGCCTCTGGGGAGAAGTGGGTTCCCTG
CCATCTCCTTTCCCAACAGAACTCCTCATAGGACCTTTCCCTGCTCACCTCTTGTACTCTCATA
CAGTATTCAGGGACCCCAAGTTAGGGGCTATGCTCCTGTTGTATAATTTCAAGCCCCCCTTTAG
AAGTTGCAGCATGCTGAGTTCAATAAACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_006249515 ⟹ XP_006249577

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,114 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,425 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,668 - 52,401,005 (+)	NCBI
Rnor_5.0	12	54,133,143 - 54,136,379 (+)	NCBI

Sequence:

show sequence

ACAACTCCATCAGCTTTGAAACAGGGACTAGATGGCTACTGTCACAATGGGCGGGGAGCGAGGC
CACACCCCCAGCCTGCCCACTGGAGCCGAGGGTGTGAGGCGCTCCAGCAGCCCTGGTGGACCGA
GCTCCTTGGGCCATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCGCT
TGGCCCGGGGCTGCTGGTCCGCGTTCTGGGACTACGAGACGCCTAAGGTGATCGTGGTGCGGAA
TCGGCGCCTGGGATTCGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTCGTGTGGGTT
GCCTCCGGAGCCGGCACCGCCCTGTCCCACAGGTACGTCTTCATCGTGCAGAAAAGCTACCAGG
ACAGCGAGACCGGACCGGAGAGCTCCATCATCACCAAAGTCAAGGGGATCACCATGTCGGAAGA
CAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGCAGTGTAGTCAGCATCATC
ACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGAACATGCCCAGAGAGCATGAGGGTTCACA
GCTCTACCTGCCATTCAGACGACGACTGTATTGCCGGACAGCTGGACATGCAAGGCAATGGGAT
TCGCACAGGGCACTGTGTACCCTATTACCATGGGGACTCCAAGACCTGCGAGGTGTCAGCCTGG
TGCCCGGTGGAGGATGGAACTTCTGACAACCATTTTCTGGGTAAAATGGCCCCAAATTTCACCA
TCCTCATCAAGAACAGCATCCACTACCCCAAGTTCAAGTTCTCAAAGGGCAACATTGCAAGCCA
GAAGAGTGACTACCTCAAGCATTGCACATTTGATCAGGACTCTGACCCATACTGTCCCATCTTC
AGGCTGGGTTTCATTGTTGAGAAGGCAGGAGAGAACTTCACAGAACTGGCACACAAGGGCGGTG
TCATTGGAGTCATCATCAACTGGAACTGTGACCTGGACTTGTCTGAATCAGAGTGCAACCCCAA
ATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTGCCTCCTCAGGCTACAACTTCAGGTTT
GCCAAGTATTACAAGATAAACGGCACTACCACCACTCGAACTCTCATCAAAGCCTATGGGATTC
GAATCGATGTTATCGTGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCACCATCATCAATCT
GGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTCCTGTGTGACTGGATTTTGTTAACGTTC
ATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGACAAGGTGCGTACTCCAAAGCATCCCT
CAAGTAGATGGCCTGTGACCCTTGCCCTTGTCTTGGGCCAGATCCCTCCCCCACCTAGTCACTA
CTCCCAGGATCAGCCACCCAGCCCTCCATCAGGTGAAGGACCAACTTTGGGAGAAGGGGCAGAG
CTACCACTGGCTGTCCAGTCTCCTCGGCCTTGCTCCATCTCTGCTCTGACTGAGCAGGTGGTGG
ACACACTTGGCCAGCATATGGGACAAAGACCTCCTGTCCCTGAGCCTTCCCAACAGGACTCCAC
ATCCACGGACCCCAAAGGTTTGGCCCAACTTTGATCTCGTCCTCACTAAACTACAGACCTGGAC
CTGGGAAGGCAGAGACAGCTTTGGCTGCTAAGGCAGTCCTAGAGAAGATCTGCGCTCTTCAGTA
ACCATGTCCATGTGACTGGGAAACAGAAACCTGTGCAAGAGGACAGGCGTCTTGCTTTAGCCCA
AGCTTACATTCTTCCTCTCCCTAAGGCCTCTGGGGAGAAGTGGGTTCCCTGCCATCTCCTTTCC
CAACAGAACTCCTCATAGGACCTTTCCCTGCTCACCTCTTGTACTCTCATACAGTATTCAGGGA
CCCCAAGTTAGGGGCTATGCCCTCCTGTTGTATAATTTCAAGCCCCCCTTTAGAAGTTGCAGCA
TGCTGAGTTCAATAAACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_006249516 ⟹ XP_006249578

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,114 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,425 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,668 - 52,401,005 (+)	NCBI
Rnor_5.0	12	54,133,143 - 54,136,379 (+)	NCBI

Sequence:

show sequence

ACAACTCCATCAGCTTTGAAACAGGGACTAGATGGCTACTGTCACAATGGGCGGGGAGCGAGGC
CACACCCCCAGCCTGCCCACTGGAGCCGAGGGTGTGAGGCGCTCCAGCAGCCCTGGTGGACCGA
GCTCCTTGGGCCATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCGCT
TGGCCCGGGGCTGCTGGTCCGCGTTCTGGGACTACGAGACGCCTAAGGTGATCGTGGTGCGGAA
TCGGCGCCTGGGATTCGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTCGTGTGGGTT
GCCTCCGGAGCCGGCACCGCCCTGTCCCACAGGTACGTCTTCATCGTGCAGAAAAGCTACCAGG
ACAGCGAGACCGGACCGGAGAGCTCCATCATCACCAAAGTCAAGGGGATCACCATGTCGGAAGA
CAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGCAGTGTAGTCAGCATCATC
ACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGAACATGCCCAGAGAGCATGAGGGTTCACA
GCTCTACCTGCCATTCAGACGACGACTGTATTGCCGGACAGCTGGACATGCAAGGCAATGGGAT
TCGCACAGGGCACTGTGTACCCTATTACCATGGGGACTCCAAGACCTGCGAGGTGTCAGCCTGG
TGCCCGGTGGAGGATGGAACTTCTGACAACCATTTTCTGGGTAAAATGGCCCCAAATTTCACCA
TCCTCATCAAGAACAGCATCCACTACCCCAAGTTCAAGTTCTCAAAGGGCAACATTGCAAGCCA
GAAGAGTGACTACCTCAAGCATTGCACATTTGATCAGGACTCTGACCCATACTGTCCCATCTTC
AGGCTGGGTTTCATTGTTGAGAAGGCAGGAGAGAACTTCACAGAACTGGCACACAAGGGCGGTG
TCATTGGAGTCATCATCAACTGGAACTGTGACCTGGACTTGTCTGAATCAGAGTGCAACCCCAA
ATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTGCCTCCTCAGGCTACAACTTCAGGTTT
GCCAAGTATTACAAGATAAACGGCACTACCACCACTCGAACTCTCATCAAAGCCTATGGGATTC
GAATCGATGTTATCGTGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCACCATCATCAATCT
GGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTCCTGTGTGACTGGATTTTGTTAACGTTC
ATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGACAAGGTGGTGGACACACTTGGCCAGC
ATATGGGACAAAGACCTCCTGTCCCTGAGCCTTCCCAACAGGACTCCACATCCACGGACCCCAA
AGGTTTGGCCCAACTTTGATCTCGTCCTCACTAAACTACAGACCTGGACCTGGGAAGGCAGAGA
CAGCTTTGGCTGCTAAGGCAGTCCTAGAGAAGATCTGCGCTCTTCAGTAACCATGTCCATGTGA
CTGGGAAACAGAAACCTGTGCAAGAGGACAGGCGTCTTGCTTTAGCCCAAGCTTACATTCTTCC
TCTCCCTAAGGCCTCTGGGGAGAAGTGGGTTCCCTGCCATCTCCTTTCCCAACAGAACTCCTCA
TAGGACCTTTCCCTGCTCACCTCTTGTACTCTCATACAGTATTCAGGGACCCCAAGTTAGGGGC
TATGCCCTCCTGTTGTATAATTTCAAGCCCCCCTTTAGAAGTTGCAGCATGCTGAGTTCAATAA
ACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_006249517 ⟹ XP_006249579

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,120 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,425 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,670 - 52,401,005 (+)	NCBI
Rnor_5.0	12	54,133,143 - 54,136,379 (+)	NCBI

Sequence:

show sequence

AACTCCATCAGCTTTGAAACAGGGACTAGATGGCTACTGTCACAATGGGCGGGGAGCGAGGCCA
CACCCCCAGCCTGCCCACTGGAGCCGAGGGTGTGAGGCGCTCCAGCAGCCCTGGTGGACCGAGC
TCCTTGGGCCATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCGCTTG
GCCCGGGGCTGCTGGTCCGCGTTCTGGGACTACGAGACGCCTAAGGTGATCGTGGTGCGGAATC
GGCGCCTGGGATTCGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTCGTGTGGTACGT
CTTCATCGTGCAGAAAAGCTACCAGGACAGCGAGACCGGACCGGAGAGCTCCATCATCACCAAA
GTCAAGGGGATCACCATGTCGGAAGACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGG
AGGGGGGCAGTGTAGTCAGCATCATCACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGAAC
ATGCCCAGAGAGCATGAGGGTTCACAGCTCTACCTGCCATTCAGACGACGACTGTATTGCCGGA
CAGCTGGACATGCAAGGCAATGGGATTCGCACAGGGCACTGTGTACCCTATTACCATGGGGACT
CCAAGACCTGCGAGGTGTCAGCCTGGTGCCCGGTGGAGGATGGAACTTCTGACAACCATTTTCT
GGGTAAAATGGCCCCAAATTTCACCATCCTCATCAAGAACAGCATCCACTACCCCAAGTTCAAG
TTCTCAAAGGGCAACATTGCAAGCCAGAAGAGTGACTACCTCAAGCATTGCACATTTGATCAGG
ACTCTGACCCATACTGTCCCATCTTCAGGCTGGGTTTCATTGTTGAGAAGGCAGGAGAGAACTT
CACAGAACTGGCACACAAGGGCGGTGTCATTGGAGTCATCATCAACTGGAACTGTGACCTGGAC
TTGTCTGAATCAGAGTGCAACCCCAAATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTG
CCTCCTCAGGCTACAACTTCAGGTTTGCCAAGTATTACAAGATAAACGGCACTACCACCACTCG
AACTCTCATCAAAGCCTATGGGATTCGAATCGATGTTATCGTGCATGGACAGGCAGGGAAATTC
AGTCTCATTCCCACCATCATCAATCTGGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTCC
TGTGTGACTGGATTTTGTTAACGTTCATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGA
CAAGGTGGTGGACACACTTGGCCAGCATATGGGACAAAGACCTCCTGTCCCTGAGCCTTCCCAA
CAGGACTCCACATCCACGGACCCCAAAGGTTTGGCCCAACTTTGATCTCGTCCTCACTAAACTA
CAGACCTGGACCTGGGAAGGCAGAGACAGCTTTGGCTGCTAAGGCAGTCCTAGAGAAGATCTGC
GCTCTTCAGTAACCATGTCCATGTGACTGGGAAACAGAAACCTGTGCAAGAGGACAGGCGTCTT
GCTTTAGCCCAAGCTTACATTCTTCCTCTCCCTAAGGCCTCTGGGGAGAAGTGGGTTCCCTGCC
ATCTCCTTTCCCAACAGAACTCCTCATAGGACCTTTCCCTGCTCACCTCTTGTACTCTCATACA
GTATTCAGGGACCCCAAGTTAGGGGCTATGCCCTCCTGTTGTATAATTTCAAGCCCCCCTTTAG
AAGTTGCAGCATGCTGAGTTCAATAAACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_008769305 ⟹ XP_008767527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,113 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,425 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,668 - 52,401,005 (+)	NCBI

Sequence:

show sequence

ACAACTCCATCAGCTTTGAAACAGGGACTAGATGGCTACTGTCACAATGGGCGGGGAGCGAGGC
CACACCCCCAGCCTGCCCACTGGAGCCGAGGGTGTGAGGCGCTCCAGCAGCCCTGGTGGACCGA
GCTCCTTGGGCCATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCGCT
TGGCCCGGGGCTGCTGGTCCGCGTTCTGGGACTACGAGACGCCTAAGGTGATCGTGGTGCGGAA
TCGGCGCCTGGGATTCGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTCGTGTGGTAC
GTCTTCATCGTGCAGAAAAGCTACCAGGACAGCGAGACCGGACCGGAGAGCTCCATCATCACCA
AAGTCAAGGGGATCACCATGTCGGAAGACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCC
GGAGGGGGGCAGTGTAGTCAGCATCATCACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGA
ACATGCCCAGAGAGCATGAGGGTTCACAGCTCTACCTGCCATTCAGACGACGACTGTATTGCCG
GACAGCTGGACATGCAAGGCAATGGGATTCGCACAGGGCACTGTGTACCCTATTACCATGGGGA
CTCCAAGACCTGCGAGGTGTCAGCCTGGTGCCCGGTGGAGGATGGAACTTCTGACAAGGGCAAC
ATTGCAAGCCAGAAGAGTGACTACCTCAAGCATTGCACATTTGATCAGGACTCTGACCCATACT
GTCCCATCTTCAGGCTGGGTTTCATTGTTGAGAAGGCAGGAGAGAACTTCACAGAACTGGCACA
CAAGGGCGGTGTCATTGGAGTCATCATCAACTGGAACTGTGACCTGGACTTGTCTGAATCAGAG
TGCAACCCCAAATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTGCCTCCTCAGGCTACA
ACTTCAGGTTTGCCAAGTATTACAAGATAAACGGCACTACCACCACTCGAACTCTCATCAAAGC
CTATGGGATTCGAATCGATGTTATCGTGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCACC
ATCATCAATCTGGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTCCTGTGTGACTGGATTT
TGTTAACGTTCATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGACAAGGTGCGTACTCC
AAAGCATCCCTCAAGTAGATGGCCTGTGACCCTTGCCCTTGTCTTGGGCCAGATCCCTCCCCCA
CCTAGTCACTACTCCCAGGATCAGCCACCCAGCCCTCCATCAGGTGAAGGACCAACTTTGGGAG
AAGGGGCAGAGCTACCACTGGCTGTCCAGTCTCCTCGGCCTTGCTCCATCTCTGCTCTGACTGA
GCAGGTGGTGGACACACTTGGCCAGCATATGGGACAAAGACCTCCTGTCCCTGAGCCTTCCCAA
CAGGACTCCACATCCACGGACCCCAAAGGTTTGGCCCAACTTTGATCTCGTCCTCACTAAACTA
CAGACCTGGACCTGGGAAGGCAGAGACAGCTTTGGCTGCTAAGGCAGTCCTAGAGAAGATCTGC
GCTCTTCAGTAACCATGTCCATGTGACTGGGAAACAGAAACCTGTGCAAGAGGACAGGCGTCTT
GCTTTAGCCCAAGCTTACATTCTTCCTCTCCCTAAGGCCTCTGGGGAGAAGTGGGTTCCCTGCC
ATCTCCTTTCCCAACAGAACTCCTCATAGGACCTTTCCCTGCTCACCTCTTGTACTCTCATACA
GTATTCAGGGACCCCAAGTTAGGGGCTATGCCCTCCTGTTGTATAATTTCAAGCCCCCCTTTAG
AAGTTGCAGCATGCTGAGTTCAATAAACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_008769306 ⟹ XP_008767528

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,475 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,728 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,915 - 52,401,005 (+)	NCBI

Sequence:

show sequence

GGTGCGGAATCGGCGCCTGGGATTCGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTC
GTGTGAAAAGCTACCAGGACAGCGAGACCGGACCGGAGAGCTCCATCATCACCAAAGTCAAGGG
GATCACCATGTCGGAAGACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGC
AGTGTAGTCAGCATCATCACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGAACATGCCCAG
AGAGCATGAGGGTTCACAGCTCTACCTGCCATTCAGACGACGACTGTATTGCCGGACAGCTGGA
CATGCAAGGCAATGGGATTCGCACAGGGCACTGTGTACCCTATTACCATGGGGACTCCAAGACC
TGCGAGGTGTCAGCCTGGTGCCCGGTGGAGGATGGAACTTCTGACAACCATTTTCTGGGTAAAA
TGGCCCCAAATTTCACCATCCTCATCAAGAACAGCATCCACTACCCCAAGTTCAAGTTCTCAAA
GGGCAACATTGCAAGCCAGAAGAGTGACTACCTCAAGCATTGCACATTTGATCAGGACTCTGAC
CCATACTGTCCCATCTTCAGGCTGGGTTTCATTGTTGAGAAGGCAGGAGAGAACTTCACAGAAC
TGGCACACAAGGGCGGTGTCATTGGAGTCATCATCAACTGGAACTGTGACCTGGACTTGTCTGA
ATCAGAGTGCAACCCCAAATATTCTTTCCGGAGGCTCGACCCCAAGTATGACCCTGCCTCCTCA
GGCTACAACTTCAGGTTTGCCAAGTATTACAAGATAAACGGCACTACCACCACTCGAACTCTCA
TCAAAGCCTATGGGATTCGAATCGATGTTATCGTGCATGGACAGGCAGGGAAATTCAGTCTCAT
TCCCACCATCATCAATCTGGCCACTGCTCTGACCTCCATCGGGGTGGGCTCCTTCCTGTGTGAC
TGGATTTTGTTAACGTTCATGAACAAAAACAAGCTCTACAGCCATAAGAAGTTCGACAAGGTGC
GTACTCCAAAGCATCCCTCAAGTAGATGGCCTGTGACCCTTGCCCTTGTCTTGGGCCAGATCCC
TCCCCCACCTAGTCACTACTCCCAGGATCAGCCACCCAGCCCTCCATCAGGTGAAGGACCAACT
TTGGGAGAAGGGGCAGAGCTACCACTGGCTGTCCAGTCTCCTCGGCCTTGCTCCATCTCTGCTC
TGACTGAGCAGGTGGTGGACACACTTGGCCAGCATATGGGACAAAGACCTCCTGTCCCTGAGCC
TTCCCAACAGGACTCCACATCCACGGACCCCAAAGGTTTGGCCCAACTTTGATCTCGTCCTCAC
TAAACTACAGACCTGGACCTGGGAAGGCAGAGACAGCTTTGGCTGCTAAGGCAGTCCTAGAGAA
GATCTGCGCTCTTCAGTAACCATGTCCATGTGACTGGGAAACAGAAACCTGTGCAAGAGGACAG
GCGTCTTGCTTTAGCCCAAGCTTACATTCTTCCTCTCCCTAAGGCCTCTGGGGAGAAGTGGGTT
CCCTGCCATCTCCTTTCCCAACAGAACTCCTCATAGGACCTTTCCCTGCTCACCTCTTGTACTC
TCATACAGTATTCAGGGACCCCAAGTTAGGGGCTATGCCCTCCTGTTGTATAATTTCAAGCCCC
CCTTTAGAAGTTGCAGCATGCTGAGTTCAATAAACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_017598234 ⟹ XP_017453723

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,109 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,425 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,666 - 52,401,005 (+)	NCBI

Sequence:

show sequence

ATACAACTCCATCAGCTTTGAAACAGGGACTAGATGGCTACTGTCACAATGGGCGGGGAGCGAG
GCCACACCCCCAGCCTGCCCACTGGAGCCGAGGGTGTGAGGCGCTCCAGCAGCCCTGGTGGACC
GAGCTCCTTGGGCCATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCG
CTTGGCCCGGGGCTGCTGGTCCGCGTTCTGGGACTACGAGACGCCTAAGGTGATCGTGGTGCGG
AATCGGCGCCTGGGATTCGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTCGTGTGGG
TTGCCTCCGGAGCCGGCACCGCCCTGTCCCACAGGTACGTCTTCATCGTGCAGAAAAGCTACCA
GGACAGCGAGACCGGACCGGAGAGCTCCATCATCACCAAAGTCAAGGGGATCACCATGTCGGAA
GACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGCAGTGTAGTCAGCATCA
TCACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGAACATGCCCAGAGAGCATGAGGGTTCA
CAGCTCTACCTGCCATTCAGACGACGACTGTATTGCCGGACAGCTGGACATGCAAGGCAATGGG
ATTCGCACAGGGCACTGTGTACCCTATTACCATGGGGACTCCAAGACCTGCGAGGTGTCAGCCT
GGTGCCCGGTGGAGGATGGAACTTCTGACAAGGGCAACATTGCAAGCCAGAAGAGTGACTACCT
CAAGCATTGCACATTTGATCAGGACTCTGACCCATACTGTCCCATCTTCAGGCTGGGTTTCATT
GTTGAGAAGGCAGGAGAGAACTTCACAGAACTGGCACACAAGGGCGGTGTCATTGGAGTCATCA
TCAACTGGAACTGTGACCTGGACTTGTCTGAATCAGAGTGCAACCCCAAATATTCTTTCCGGAG
GCTCGACCCCAAGTATGACCCTGCCTCCTCAGGCTACAACTTCAGGTTTGCCAAGTATTACAAG
ATAAACGGCACTACCACCACTCGAACTCTCATCAAAGCCTATGGGATTCGAATCGATGTTATCG
TGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCACCATCATCAATCTGGCCACTGCTCTGAC
CTCCATCGGGGTGGGCTCCTTCCTGTGTGACTGGATTTTGTTAACGTTCATGAACAAAAACAAG
CTCTACAGCCATAAGAAGTTCGACAAGGTGCGTACTCCAAAGCATCCCTCAAGTAGATGGCCTG
TGACCCTTGCCCTTGTCTTGGGCCAGATCCCTCCCCCACCTAGTCACTACTCCCAGGATCAGCC
ACCCAGCCCTCCATCAGGTGAAGGACCAACTTTGGGAGAAGGGGCAGAGCTACCACTGGCTGTC
CAGTCTCCTCGGCCTTGCTCCATCTCTGCTCTGACTGAGCAGGTGGTGGACACACTTGGCCAGC
ATATGGGACAAAGACCTCCTGTCCCTGAGCCTTCCCAACAGGACTCCACATCCACGGACCCCAA
AGGTTTGGCCCAACTTTGATCTCGTCCTCACTAAACTACAGACCTGGACCTGGGAAGGCAGAGA
CAGCTTTGGCTGCTAAGGCAGTCCTAGAGAAGATCTGCGCTCTTCAGTAACCATGTCCATGTGA
CTGGGAAACAGAAACCTGTGCAAGAGGACAGGCGTCTTGCTTTAGCCCAAGCTTACATTCTTCC
TCTCCCTAAGGCCTCTGGGGAGAAGTGGGTTCCCTGCCATCTCCTTTCCCAACAGAACTCCTCA
TAGGACCTTTCCCTGCTCACCTCTTGTACTCTCATACAGTATTCAGGGACCCCAAGTTAGGGGC
TATGCCCTCCTGTTGTATAATTTCAAGCCCCCCTTTAGAAGTTGCAGCATGCTGAGTTCAATAA
ACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_017598236 ⟹ XP_017453725

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,109 - 52,002,627 (+)	NCBI
mRatBN7.2	12	46,339,425 - 46,342,891 (+)	NCBI
Rnor_6.0	12	52,397,666 - 52,401,005 (+)	NCBI

Sequence:

show sequence

ATACAACTCCATCAGCTTTGAAACAGGGACTAGATGGCTACTGTCACAATGGGCGGGGAGCGAG
GCCACACCCCCAGCCTGCCCACTGGAGCCGAGGGTGTGAGGCGCTCCAGCAGCCCTGGTGGACC
GAGCTCCTTGGGCCATGGCCGCTGCACAGCCCCGGCTTCCCGCGGGGGCGGCCATGGTCCGGCG
CTTGGCCCGGGGCTGCTGGTCCGCGTTCTGGGACTACGAGACGCCTAAGGTGATCGTGGTGCGG
AATCGGCGCCTGGGATTCGTGCACCGCATGGTGCAGCTTCTCATCCTGCTTTACTTCGTGTGGG
TTGCCTCCGGAGCCGGCACCGCCCTGTCCCACAGGTACGTCTTCATCGTGCAGAAAAGCTACCA
GGACAGCGAGACCGGACCGGAGAGCTCCATCATCACCAAAGTCAAGGGGATCACCATGTCGGAA
GACAAAGTGTGGGACGTGGAGGAATACGTAAAGCCCCCGGAGGGGGGCAGTGTAGTCAGCATCA
TCACCAGGATCGAGGTTACCCCTTCCCAGACCTTGGGAACATGCCCAGAGAGCATGAGGGTTCA
CAGCTCTACCTGCCATTCAGACGACGACTGTATTGCCGGACAGCTGGACATGCAAGGCAATGGG
ATTCGCACAGGGCACTGTGTACCCTATTACCATGGGGACTCCAAGACCTGCGAGGTGTCAGCCT
GGTGCCCGGTGGAGGATGGAACTTCTGACAAGGGCAACATTGCAAGCCAGAAGAGTGACTACCT
CAAGCATTGCACATTTGATCAGGACTCTGACCCATACTGTCCCATCTTCAGGCTGGGTTTCATT
GTTGAGAAGGCAGGAGAGAACTTCACAGAACTGGCACACAAGGGCGGTGTCATTGGAGTCATCA
TCAACTGGAACTGTGACCTGGACTTGTCTGAATCAGAGTGCAACCCCAAATATTCTTTCCGGAG
GCTCGACCCCAAGTATGACCCTGCCTCCTCAGGCTACAACTTCAGGTTTGCCAAGTATTACAAG
ATAAACGGCACTACCACCACTCGAACTCTCATCAAAGCCTATGGGATTCGAATCGATGTTATCG
TGCATGGACAGGCAGGGAAATTCAGTCTCATTCCCACCATCATCAATCTGGCCACTGCTCTGAC
CTCCATCGGGGTGGGCTCCTTCCTGTGTGACTGGATTTTGTTAACGTTCATGAACAAAAACAAG
CTCTACAGCCATAAGAAGTTCGACAAGGTGGTGGACACACTTGGCCAGCATATGGGACAAAGAC
CTCCTGTCCCTGAGCCTTCCCAACAGGACTCCACATCCACGGACCCCAAAGGTTTGGCCCAACT
TTGATCTCGTCCTCACTAAACTACAGACCTGGACCTGGGAAGGCAGAGACAGCTTTGGCTGCTA
AGGCAGTCCTAGAGAAGATCTGCGCTCTTCAGTAACCATGTCCATGTGACTGGGAAACAGAAAC
CTGTGCAAGAGGACAGGCGTCTTGCTTTAGCCCAAGCTTACATTCTTCCTCTCCCTAAGGCCTC
TGGGGAGAAGTGGGTTCCCTGCCATCTCCTTTCCCAACAGAACTCCTCATAGGACCTTTCCCTG
CTCACCTCTTGTACTCTCATACAGTATTCAGGGACCCCAAGTTAGGGGCTATGCCCTCCTGTTG
TATAATTTCAAGCCCCCCTTTAGAAGTTGCAGCATGCTGAGTTCAATAAACCAGTGATGAGC

hide sequence

RefSeq Acc Id:

XM_063270982 ⟹ XP_063127052

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,113 - 52,002,627 (+)	NCBI

RefSeq Acc Id:

XM_063270983 ⟹ XP_063127053

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,111 - 52,002,627 (+)	NCBI

RefSeq Acc Id:

XR_005491585

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	12	51,999,107 - 52,001,775 (+)	NCBI
mRatBN7.2	12	46,339,425 - 46,342,891 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_446108	(Get FASTA)	NCBI Sequence Viewer
	XP_006249577	(Get FASTA)	NCBI Sequence Viewer
	XP_006249578	(Get FASTA)	NCBI Sequence Viewer
	XP_006249579	(Get FASTA)	NCBI Sequence Viewer
	XP_008767527	(Get FASTA)	NCBI Sequence Viewer
	XP_008767528	(Get FASTA)	NCBI Sequence Viewer
	XP_017453723	(Get FASTA)	NCBI Sequence Viewer
	XP_017453725	(Get FASTA)	NCBI Sequence Viewer
	XP_063127052	(Get FASTA)	NCBI Sequence Viewer
	XP_063127053	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA50756	(Get FASTA)	NCBI Sequence Viewer
	AAB94570	(Get FASTA)	NCBI Sequence Viewer
	AAB94571	(Get FASTA)	NCBI Sequence Viewer
	AAB94572	(Get FASTA)	NCBI Sequence Viewer
	AAB94573	(Get FASTA)	NCBI Sequence Viewer
	AAC15083	(Get FASTA)	NCBI Sequence Viewer
	AAC16883	(Get FASTA)	NCBI Sequence Viewer
	AAC42067	(Get FASTA)	NCBI Sequence Viewer
	AAC72285	(Get FASTA)	NCBI Sequence Viewer
	AAC72286	(Get FASTA)	NCBI Sequence Viewer
	AAC72287	(Get FASTA)	NCBI Sequence Viewer
	CAA71046	(Get FASTA)	NCBI Sequence Viewer
	CAA71499	(Get FASTA)	NCBI Sequence Viewer
	CAA71500	(Get FASTA)	NCBI Sequence Viewer
	CAA71501	(Get FASTA)	NCBI Sequence Viewer
	EDM14046	(Get FASTA)	NCBI Sequence Viewer
	EDM14047	(Get FASTA)	NCBI Sequence Viewer
	EDM14048	(Get FASTA)	NCBI Sequence Viewer
	EDM14049	(Get FASTA)	NCBI Sequence Viewer
	EDM14050	(Get FASTA)	NCBI Sequence Viewer
	EDM14051	(Get FASTA)	NCBI Sequence Viewer
	EDM14052	(Get FASTA)	NCBI Sequence Viewer
	EDM14053	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000053532.2
	ENSRNOP00000053533.4
	ENSRNOP00000074992.1
GenBank Protein	P49653	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_446108 ⟸ NM_053656

- UniProtKB:

O54868 (UniProtKB/Swiss-Prot), P49653 (UniProtKB/Swiss-Prot), Q78DW3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWYVFIVQKSYQDSETGPES
SIITKVKGITMSEDKVWDVEEYVKPPEGGSVVSIITRIEVTPSQTLGTCPESMRVHSSTCHSDD
DCIAGQLDMQGNGIRTGHCVPYYHGDSKTCEVSAWCPVEDGTSDNHFLGKMAPNFTILIKNSIH
YPKFKFSKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGFIVEKAGENFTELAHKGGVIGVIINW
NCDLDLSESECNPKYSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHG
QAGKFSLIPTIINLATALTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVRTPKHPSSRWPVTL
ALVLGQIPPPPSHYSQDQPPSPPSGEGPTLGEGAELPLAVQSPRPCSISALTEQVVDTLGQHMG
QRPPVPEPSQQDSTSTDPKGLAQL

hide sequence

RefSeq Acc Id:	XP_006249577 ⟸ XM_006249515
- Peptide Label:	isoform X1
- UniProtKB:	A0A140TAH4 (UniProtKB/TrEMBL), A6J2A7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWVASGA GTALSHRYVFIVQKSYQDSETGPESSIITKVKGITMSEDKVWDVEEYVKPPEGGSVVSIITRIE VTPSQTLGTCPESMRVHSSTCHSDDDCIAGQLDMQGNGIRTGHCVPYYHGDSKTCEVSAWCPVE DGTSDNHFLGKMAPNFTILIKNSIHYPKFKFSKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGF IVEKAGENFTELAHKGGVIGVIINWNCDLDLSESECNPKYSFRRLDPKYDPASSGYNFRFAKYY KINGTTTTRTLIKAYGIRIDVIVHGQAGKFSLIPTIINLATALTSIGVGSFLCDWILLTFMNKN KLYSHKKFDKVRTPKHPSSRWPVTLALVLGQIPPPPSHYSQDQPPSPPSGEGPTLGEGAELPLA VQSPRPCSISALTEQVVDTLGQHMGQRPPVPEPSQQDSTSTDPKGLAQL hide sequence

RefSeq Acc Id:	XP_006249578 ⟸ XM_006249516
- Peptide Label:	isoform X4
- UniProtKB:	Q78DW4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWVASGA GTALSHRYVFIVQKSYQDSETGPESSIITKVKGITMSEDKVWDVEEYVKPPEGGSVVSIITRIE VTPSQTLGTCPESMRVHSSTCHSDDDCIAGQLDMQGNGIRTGHCVPYYHGDSKTCEVSAWCPVE DGTSDNHFLGKMAPNFTILIKNSIHYPKFKFSKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGF IVEKAGENFTELAHKGGVIGVIINWNCDLDLSESECNPKYSFRRLDPKYDPASSGYNFRFAKYY KINGTTTTRTLIKAYGIRIDVIVHGQAGKFSLIPTIINLATALTSIGVGSFLCDWILLTFMNKN KLYSHKKFDKVVDTLGQHMGQRPPVPEPSQQDSTSTDPKGLAQL hide sequence

RefSeq Acc Id:	XP_006249579 ⟸ XM_006249517
- Peptide Label:	isoform X5
- UniProtKB:	A0A0G2K9G8 (UniProtKB/TrEMBL), A6J2A8 (UniProtKB/TrEMBL), Q78DW4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWYVFIV QKSYQDSETGPESSIITKVKGITMSEDKVWDVEEYVKPPEGGSVVSIITRIEVTPSQTLGTCPE SMRVHSSTCHSDDDCIAGQLDMQGNGIRTGHCVPYYHGDSKTCEVSAWCPVEDGTSDNHFLGKM APNFTILIKNSIHYPKFKFSKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGFIVEKAGENFTEL AHKGGVIGVIINWNCDLDLSESECNPKYSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLI KAYGIRIDVIVHGQAGKFSLIPTIINLATALTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVV DTLGQHMGQRPPVPEPSQQDSTSTDPKGLAQL hide sequence

RefSeq Acc Id:	XP_008767527 ⟸ XM_008769305
- Peptide Label:	isoform X3
- UniProtKB:	A6J2B0 (UniProtKB/TrEMBL), A0A140TAH4 (UniProtKB/TrEMBL), A6J2A7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWYVFIV QKSYQDSETGPESSIITKVKGITMSEDKVWDVEEYVKPPEGGSVVSIITRIEVTPSQTLGTCPE SMRVHSSTCHSDDDCIAGQLDMQGNGIRTGHCVPYYHGDSKTCEVSAWCPVEDGTSDKGNIASQ KSDYLKHCTFDQDSDPYCPIFRLGFIVEKAGENFTELAHKGGVIGVIINWNCDLDLSESECNPK YSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHGQAGKFSLIPTIINL ATALTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVRTPKHPSSRWPVTLALVLGQIPPPPSHY SQDQPPSPPSGEGPTLGEGAELPLAVQSPRPCSISALTEQVVDTLGQHMGQRPPVPEPSQQDST STDPKGLAQL hide sequence

RefSeq Acc Id:	XP_008767528 ⟸ XM_008769306
- Peptide Label:	isoform X7
- UniProtKB:	A6J2B1 (UniProtKB/TrEMBL), A6J2B4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSEDKVWDVEEYVKPPEGGSVVSIITRIEVTPSQTLGTCPESMRVHSSTCHSDDDCIAGQLDMQ GNGIRTGHCVPYYHGDSKTCEVSAWCPVEDGTSDNHFLGKMAPNFTILIKNSIHYPKFKFSKGN IASQKSDYLKHCTFDQDSDPYCPIFRLGFIVEKAGENFTELAHKGGVIGVIINWNCDLDLSESE CNPKYSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHGQAGKFSLIPT IINLATALTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVRTPKHPSSRWPVTLALVLGQIPPP PSHYSQDQPPSPPSGEGPTLGEGAELPLAVQSPRPCSISALTEQVVDTLGQHMGQRPPVPEPSQ QDSTSTDPKGLAQL hide sequence

RefSeq Acc Id:	XP_017453723 ⟸ XM_017598234
- Peptide Label:	isoform X2
- UniProtKB:	A0A140TAH4 (UniProtKB/TrEMBL), A6J2A7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWVASGA GTALSHRYVFIVQKSYQDSETGPESSIITKVKGITMSEDKVWDVEEYVKPPEGGSVVSIITRIE VTPSQTLGTCPESMRVHSSTCHSDDDCIAGQLDMQGNGIRTGHCVPYYHGDSKTCEVSAWCPVE DGTSDKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGFIVEKAGENFTELAHKGGVIGVIINWNC DLDLSESECNPKYSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHGQA GKFSLIPTIINLATALTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVRTPKHPSSRWPVTLAL VLGQIPPPPSHYSQDQPPSPPSGEGPTLGEGAELPLAVQSPRPCSISALTEQVVDTLGQHMGQR PPVPEPSQQDSTSTDPKGLAQL hide sequence

RefSeq Acc Id:	XP_017453725 ⟸ XM_017598236
- Peptide Label:	isoform X6
- UniProtKB:	Q78DW4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAQPRLPAGAAMVRRLARGCWSAFWDYETPKVIVVRNRRLGFVHRMVQLLILLYFVWVASGA GTALSHRYVFIVQKSYQDSETGPESSIITKVKGITMSEDKVWDVEEYVKPPEGGSVVSIITRIE VTPSQTLGTCPESMRVHSSTCHSDDDCIAGQLDMQGNGIRTGHCVPYYHGDSKTCEVSAWCPVE DGTSDKGNIASQKSDYLKHCTFDQDSDPYCPIFRLGFIVEKAGENFTELAHKGGVIGVIINWNC DLDLSESECNPKYSFRRLDPKYDPASSGYNFRFAKYYKINGTTTTRTLIKAYGIRIDVIVHGQA GKFSLIPTIINLATALTSIGVGSFLCDWILLTFMNKNKLYSHKKFDKVVDTLGQHMGQRPPVPE PSQQDSTSTDPKGLAQL hide sequence

Ensembl Acc Id:

ENSRNOP00000074992 ⟸ ENSRNOT00000085661

Ensembl Acc Id:

ENSRNOP00000053533 ⟸ ENSRNOT00000056694

Ensembl Acc Id:

ENSRNOP00000053532 ⟸ ENSRNOT00000056693

Ensembl Acc Id:

ENSRNOP00000053531 ⟸ ENSRNOT00000056692

Ensembl Acc Id:

ENSRNOP00000073541 ⟸ ENSRNOT00000081447

RefSeq Acc Id:	XP_063127053 ⟸ XM_063270983
- Peptide Label:	isoform X9
- UniProtKB:	A0A140TAH4 (UniProtKB/TrEMBL), A6J2A7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063127052 ⟸ XM_063270982
- Peptide Label:	isoform X8
- UniProtKB:	Q78DW4 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-P49653-F1-model_v2	AlphaFold	P49653	1-472	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:620251	AgrOrtholog
BioCyc Gene	G2FUF-18806	BioCyc
Ensembl Genes	ENSRNOG00000037456	Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000056693.4	UniProtKB/Swiss-Prot
	ENSRNOT00000056694.5	UniProtKB/TrEMBL
	ENSRNOT00000085661.2	UniProtKB/TrEMBL
Gene3D-CATH	2.60.490.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	atp-gated p2x4 ion channel	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	P2X2_purnocptor	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P2X_extracellular_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P2X_purnocptor	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P2X_RECEPTOR_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:114115	UniProtKB/Swiss-Prot
NCBI Gene	114115	ENTREZGENE
PANTHER	P2X PURINOCEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P2X PURINOCEPTOR 2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	P2X_receptor	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	P2rx2	PhenoGen
PIRSF	P2X_purinoceptor	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS	P2X2RECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	P2XRECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE	P2X_RECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000037456	RatGTEx
UniProt	A0A0G2K9G8	ENTREZGENE, UniProtKB/TrEMBL
	A0A140TAH4	ENTREZGENE, UniProtKB/TrEMBL
	A6J2A7	ENTREZGENE, UniProtKB/TrEMBL
	A6J2A8	ENTREZGENE, UniProtKB/TrEMBL
	A6J2A9_RAT	UniProtKB/TrEMBL
	A6J2B0	ENTREZGENE, UniProtKB/TrEMBL
	A6J2B1	ENTREZGENE, UniProtKB/TrEMBL
	A6J2B2_RAT	UniProtKB/TrEMBL
	A6J2B3_RAT	UniProtKB/TrEMBL
	A6J2B4	ENTREZGENE, UniProtKB/TrEMBL
	O54868	ENTREZGENE
	P2RX2_RAT	UniProtKB/Swiss-Prot, ENTREZGENE
	Q78DW3	ENTREZGENE, UniProtKB/TrEMBL
	Q78DW4	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	O54868	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-11	P2rx2	purinergic receptor P2X 2	P2rx2	purinergic receptor P2X, ligand-gated ion channel, 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2004-02-26	P2rx2	purinergic receptor P2X, ligand-gated ion channel, 2			Symbol and Name status set to approved	625702	APPROVED
2002-08-07	P2rx2	purinergic receptor P2X, ligand-gated ion channel, 2			Symbol and Name status set to provisional	70820	PROVISIONAL

RGD Curation Notes

Note Type	Note	Reference
gene_expression	expressed in pituitary gland and the secretory epithelial tissue of the cochlea	633339
gene_regulation	expression is upregulated by cerebellar lesion in precerebellar nuclei	633341

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

Imported Annotations - KEGG (archival)