Gene: Slc1a6 (solute carrier family 1 member 6) Rattus norvegicus
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Symbol: Slc1a6
Name: solute carrier family 1 member 6
Description: ENCODES a protein that exhibits anion transmembrane transporter activity; high-affinity glutamate transmembrane transporter activity; L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN L-glutamate import across plasma membrane; L-glutamate transmembrane transport; neurotransmitter uptake (ortholog); PARTICIPATES IN glutamate signaling pathway; FOUND IN integral component of plasma membrane; integral component of postsynaptic membrane; parallel fiber to Purkinje cell synapse; INTERACTS WITH 6-propyl-2-thiouracil; ammonium chloride; androgen antagonist
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: EAAT4; excitatory amino acid transporter 4; high affinity aspartate/glutamate transporter; high-affinity neuronal glutamate transporter; MGC114297; sodium-dependent glutamate/aspartate transporter; solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
Orthologs:
Homo sapiens (human) : SLC1A6 (solute carrier family 1 member 6)  HGNC  Alliance
Mus musculus (house mouse) : Slc1a6 (solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Slc1a6 (solute carrier family 1 member 6)
Pan paniscus (bonobo/pygmy chimpanzee) : SLC1A6 (solute carrier family 1 member 6)
Canis lupus familiaris (dog) : SLC1A6 (solute carrier family 1 member 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Slc1a6 (solute carrier family 1 member 6)
Sus scrofa (pig) : SLC1A6 (solute carrier family 1 member 6)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0713,730,101 - 13,758,170 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0713,893,841 - 13,921,839 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4712,393,284 - 12,419,893 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1712,393,284 - 12,419,880 (-)NCBI
Celera78,958,917 - 8,988,056 (-)NCBICelera
Cytogenetic Map7q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Slc1a6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620340
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-01-30
Status: ACTIVE



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