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ONTOLOGY REPORT - ANNOTATIONS

Term:sarcoplasmic reticulum calcium ion transport
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Accession:GO:0070296 term browser browse the term
Definition:The directed movement of calcium ions (Ca2+) into, out of or within the sarcoplasmic reticulum.


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sarcoplasmic reticulum calcium ion transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 IDA RGD PMID:19029185 RGD:2313265 NCBI chr 1:181,026,606...181,044,859
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 acts_upstream_of_or_within IDA
ISO		 MGI:4415164 (PMID:22355118) RGD PMID:22355118 PMID:21300842 RGD:6904139 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Cacng1 calcium voltage-gated channel auxiliary subunit gamma 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2180153 (PMID:15504904)		 Ensembl
RGD		 PMID:15504904 GO_REF:0000107 NCBI chr10:92,652,924...92,665,612
Ensembl chr10:92,652,614...92,665,783 		JBrowse link
G Ryr1 ryanodine receptor 1 IDA RGD PMID:19230144 RGD:7175256 NCBI chr 1:84,292,578...84,423,824
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
G Ryr2 ryanodine receptor 2 IMP RGD PMID:21807619 RGD:7175254 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Sln sarcolipin involved_in ISS
ISO		 GO_REF:0000024
(MGI:5295553|PMID:21697544)		 UniProt
RGD		 PMID:21697544 GO_REF:0000024 MGI:5295553 NCBI chr 8:54,221,389...54,248,110
Ensembl chr 8:54,243,542...54,247,791 		JBrowse link
calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in IDA
ISO
IEA		 PMID:9851937
(PMID:16402920)
GO_REF:0000107
(PMID:29475982)		 RGD
Ensembl		 PMID:16402920 PMID:29475982 PMID:9851937 GO_REF:0000107, RGD:10047146 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Mrln myoregulin acts_upstream_of ISO (PMID:25640239) RGD PMID:25640239 NCBI chr20:18,406,789...18,423,805
Ensembl chr20:18,406,707...18,428,418 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (PMID:27799555) RGD PMID:27799555 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
negative regulation of calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrc histidine rich calcium binding protein IMP RGD PMID:22952658 RGD:9685495 NCBI chr 1:95,813,262...95,816,987
Ensembl chr 1:95,813,253...95,816,984 		JBrowse link
G Mrln myoregulin acts_upstream_of_or_within ISO (PMID:25640239) RGD PMID:25640239 NCBI chr20:18,406,789...18,423,805
Ensembl chr20:18,406,707...18,428,418 		JBrowse link
G Pln phospholamban involved_in ISO
IBA
ISS		 (PMID:8349590)
GO_REF:0000033
(MGI:6304509|PMID:30299255)
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:8349590 PMID:30299255 GO_REF:0000024 GO_REF:0000033 MGI:6304509 NCBI chr20:32,629,537...32,639,559 JBrowse link
positive regulation of calcium ion import into sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Strit1 small transmembrane regulator of ion transport 1 involved_in ISO (MGI:5751610|PMID:26816378), (MGI:6304509|PMID:30299255) RGD PMID:26816378 PMID:30299255 MGI:5751610 MGI:6304509 NCBI chr 2:147,935,219...147,938,083
Ensembl chr 2:147,935,222...147,938,083 		JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO UniProtKB:Q8C8R3 (PMID:17178715)
(MGI:5427070|PMID:21859974), (MGI:5430893|PMID:17178715)		 RGD PMID:17178715 PMID:21859974 MGI:5427070 MGI:5430893 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Casq2 calsequestrin 2 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA
IMP		 (PMID:16601229), (PMID:16908766)
(PMID:9525981)
GO_REF:0000033
GO_REF:0000107
(MGI:3689635|PMID:16932808)
PMID:17569730		 RGD
GO_Central
Ensembl		 PMID:9525981 PMID:16601229 PMID:16908766 PMID:16932808 PMID:17569730 GO_REF:0000033 GO_REF:0000107 MGI:3689635, RGD:2314601 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G Dmd dystrophin involved_in ISO (MGI:4420848|PMID:20080623) RGD PMID:20080623 MGI:4420848 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in ISO
IBA		 (MGI:3621834|PMID:12837242)
(PMID:20431056), (PMID:7592869)
GO_REF:0000033		 RGD
GO_Central		 PMID:7592869 PMID:12837242 PMID:20431056 GO_REF:0000033 MGI:3621834 NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653 		JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO MGI:2158357 (PMID:8831698) RGD PMID:8831698 NCBI chr20:32,629,537...32,639,559 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q9Z2I2 (MGI:3621834|PMID:12837242)		 Ensembl
RGD		 PMID:12837242 GO_REF:0000107 MGI:3621834 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in IDA PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Tmem38a transmembrane protein 38a involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1098718 (PMID:17611541)		 Ensembl
RGD		 PMID:17611541 GO_REF:0000107 NCBI chr16:17,258,160...17,274,204
Ensembl chr16:17,258,164...17,273,415 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (PMID:17611541) RGD PMID:17611541 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025 		JBrowse link
regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap6 A-kinase anchoring protein 6 involved_in IC PMID:12709444 BHF-UCL PMID:12709444 RGD:8554839 NCBI chr 6:70,184,101...70,624,369
Ensembl chr 6:70,184,175...70,619,738 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO
IEA		 (PMID:20226167)
GO_REF:0000107		 RGD
Ensembl		 PMID:20226167 GO_REF:0000107 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:20226167) RGD PMID:20226167 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
Ensembl chr15:7,091,567...7,104,287 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:20226167) RGD PMID:20226167 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IDA PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Casq1 calsequestrin 1 acts_upstream_of_or_within ISO MGI:3530841 (PMID:12419813), (PMID:17627988) RGD PMID:12419813 PMID:17627988 NCBI chr13:84,670,648...84,680,339
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G Casq2 calsequestrin 2 involved_in ISO (PMID:15041652)
(MGI:3689635|PMID:16932808)		 RGD PMID:15041652 PMID:16932808 MGI:3689635 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 acts_upstream_of_or_within ISO MGI:2176467|MGI:4433295 (PMID:26102480) RGD PMID:26102480 NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358 		JBrowse link
G Clic2 chloride intracellular channel 2 involved_in ISO (PMID:15147738), (PMID:15916532) RGD PMID:15147738 PMID:15916532 NCBI chr20:149,337...164,375
Ensembl chr20:148,907...164,355 		JBrowse link
G Dhrs7c dehydrogenase/reductase 7C involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
(PMID:21995425)		 UniProt
RGD		 PMID:21995425 GO_REF:0000024 NCBI chr10:52,495,262...52,513,338
Ensembl chr10:52,495,262...52,513,338 		JBrowse link
G Dmd dystrophin involved_in ISO (MGI:4420848|PMID:20080623), (MGI:5487906|PMID:23263329) RGD PMID:20080623 PMID:23263329 MGI:4420848 MGI:5487906 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in
acts_upstream_of_or_within		 ISO (PMID:20431056)
MGI:2182644|MGI:3623214 (PMID:14592808), (PMID:16672364), (PMID:19578067)		 RGD PMID:14592808 PMID:16672364 PMID:19578067 PMID:20431056 NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653 		JBrowse link
G Gstm2 glutathione S-transferase mu 2 involved_in ISO (PMID:17023043) RGD PMID:17023043 NCBI chr 2:195,624,015...195,628,774
Ensembl chr 2:195,544,426...195,628,961 		JBrowse link
G Gstm7 glutathione S-transferase, mu 7 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:195,566,701...195,572,149
Ensembl chr 2:195,566,701...195,572,203 		JBrowse link
G Gsto1 glutathione S-transferase omega 1 involved_in ISO (PMID:11035031) RGD PMID:11035031 NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468 		JBrowse link
G Hrc histidine rich calcium binding protein involved_in ISO UniProtKB:B9EIW1 (PMID:24125847) RGD PMID:24125847 NCBI chr 1:95,813,262...95,816,987
Ensembl chr 1:95,813,253...95,816,984 		JBrowse link
G Mettl21c methyltransferase 21C, AARS1 lysine acts_upstream_of_or_within ISO (PMID:24677265) RGD PMID:24677265 NCBI chr 9:46,130,451...46,145,128
Ensembl chr 9:46,134,001...46,145,112 		JBrowse link
G Mir1 microRNA 1 involved_in
acts_upstream_of		 ISO (PMID:19131648) RGD PMID:19131648 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir1b microRNA 1b involved_in
acts_upstream_of		 ISO (PMID:19131648) RGD PMID:19131648 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201 		JBrowse link
G Nol3 nucleolar protein 3 involved_in IMP PMID:23382383 UniProt PMID:23382383 RGD:10047354 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250 		JBrowse link
G Pde4d phosphodiesterase 4D involved_in ISO (MGI:3690823|PMID:16213210) RGD PMID:16213210 MGI:3690823 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884 		JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO MGI:2158357 (PMID:9118481) RGD PMID:9118481 NCBI chr20:32,629,537...32,639,559 JBrowse link
G Trdn triadin involved_in IMP
IBA
ISO		 GO_REF:0000033
(PMID:15041652)		 GO_Central
RGD		 PMID:15041652 PMID:17569730 GO_REF:0000033, RGD:2314601 NCBI chr 1:23,955,651...24,410,494
Ensembl chr 1:23,955,651...24,410,595 		JBrowse link
regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 involved_in
acts_upstream_of_or_within		 ISS
ISO
IBA		 GO_REF:0000024
MGI:3530841 (PMID:17627988)
GO_REF:0000033
(MGI:5306707|PMID:22049211)		 UniProt
RGD
GO_Central		 PMID:17627988 PMID:22049211 GO_REF:0000024 GO_REF:0000033 MGI:5306707 NCBI chr13:84,670,648...84,680,339
Ensembl chr13:84,670,649...84,680,339 		JBrowse link
G Dmd dystrophin involved_in ISO (MGI:3837615|PMID:19198614) RGD PMID:19198614 MGI:3837615 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A involved_in ISO (PMID:7592869) RGD PMID:7592869 NCBI chr 3:140,040,359...140,060,107
Ensembl chr 3:140,040,278...140,060,743 		JBrowse link
release of sequestered calcium ion into cytosol by sarcoplasmic reticulum term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl3 C-C motif chemokine ligand 3 involved_in ISO
ISS		 (PMID:19523456)
GO_REF:0000024		 RGD
UniProt		 PMID:19523456 GO_REF:0000024 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 involved_in ISO (PMID:19523456) RGD PMID:19523456 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260 		JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO
IEA		 (PMID:15509781)
GO_REF:0000107		 RGD
Ensembl		 PMID:15509781 GO_REF:0000107 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250 		JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS
IBA
ISO
IDA		 GO_REF:0000024
GO_REF:0000033
(MGI:3764002|PMID:18003898)
PMID:11316255		 UniProt
GO_Central
RGD		 PMID:18003898 PMID:11316255 GO_REF:0000024 GO_REF:0000033 MGI:3764002, RGD:12903237 NCBI chr 1:84,292,578...84,423,824
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:12089338)
GO_REF:0000033
GO_REF:0000024
(PMID:12919952), (PMID:27733687), (PMID:33536282)
(MGI:4442115|PMID:20226167)		 Ensembl
RGD
GO_Central
UniProt		 PMID:12089338 PMID:12919952 PMID:20226167 PMID:27733687 PMID:33536282 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:4442115 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Tmem38a transmembrane protein 38a involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1098718 (PMID:17611541)		 Ensembl
RGD		 PMID:17611541 GO_REF:0000107 NCBI chr16:17,258,160...17,274,204
Ensembl chr16:17,258,164...17,273,415 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (PMID:17611541) RGD PMID:17611541 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025 		JBrowse link
G Trdn triadin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3769415 (PMID:19383796)		 Ensembl
RGD		 PMID:19383796 GO_REF:0000107 NCBI chr 1:23,955,651...24,410,494
Ensembl chr 1:23,955,651...24,410,595 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    localization 5613
      establishment of localization 4924
        transport 4612
          monoatomic ion transport 1301
            monoatomic cation transport 1099
              metal ion transport 940
                calcium ion transport 458
                  sarcoplasmic reticulum calcium ion transport 40
                    calcium ion import into sarcoplasmic reticulum + 7
                    release of sequestered calcium ion into cytosol by sarcoplasmic reticulum + 33
paths to the root