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ONTOLOGY REPORT - ANNOTATIONS

Term:ubiquitin binding
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Accession:GO:0043130 term browser browse the term
Definition:Binding to ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.
Synonyms:xref: reactome:R-HSA-1169404 "Transfer of ISG15 from E1 to E2 (UBCH8)";   reactome:R-HSA-205008 "Polyubiquitinated NRIF binds to p62 (Sequestosome)";   reactome:R-HSA-983152 "Transfer of ubiquitin from E1 to E2"


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ubiquitin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor enables IEA InterPro GO_REF:0000002 NCBI chr16:56,361,452...56,425,545
Ensembl chr16:56,361,452...56,425,545 		JBrowse link
G ASCC2 activating signal cointegrator 1 complex subunit 2 enables IEA
IBA		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr22:29,788,611...29,838,274
Ensembl chr22:29,788,609...29,838,304 		JBrowse link
G AUP1 AUP1 lipid droplet regulating VLDL assembly factor enables IEA InterPro GO_REF:0000002 NCBI chr 2:74,526,652...74,529,706
Ensembl chr 2:74,526,645...74,529,760 		JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 enables IDA (PMID:16510124) ParkinsonsUK-UCL PMID:16510124 NCBI chr11:102,347,214...102,378,670
Ensembl chr11:102,347,211...102,378,670 		JBrowse link
G BUB3 BUB3 mitotic checkpoint protein enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:123,154,402...123,170,467
Ensembl chr10:123,154,402...123,170,467 		JBrowse link
G CKS1B CDC28 protein kinase regulatory subunit 1B enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:154,974,681...154,979,251
Ensembl chr 1:154,974,653...154,979,251 		JBrowse link
G CKS2 CDC28 protein kinase regulatory subunit 2 enables IBA GO_Central GO_REF:0000033 NCBI chr 9:89,311,195...89,316,703
Ensembl chr 9:89,311,195...89,316,703 		JBrowse link
G CUEDC1 CUE domain containing 1 enables IEA InterPro GO_REF:0000002 NCBI chr17:57,861,243...57,955,412
Ensembl chr17:57,861,243...57,955,412 		JBrowse link
G CUEDC2 CUE domain containing 2 enables IEA InterPro GO_REF:0000002 NCBI chr10:102,423,249...102,432,574
Ensembl chr10:102,423,245...102,432,584 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 enables IDA (PMID:20228059) UniProt PMID:20228059 NCBI chr 2:136,114,349...136,118,149
Ensembl chr 2:136,114,349...136,119,177 		JBrowse link
G DDI2 DNA damage inducible 1 homolog 2 enables IDA (PMID:27461074) UniProt PMID:27461074 NCBI chr 1:15,617,458...15,669,044
Ensembl chr 1:15,617,458...15,669,044 		JBrowse link
G DHX16 DEAH-box helicase 16 enables IDA (PMID:35263596) UniProt PMID:35263596 NCBI chr 6:30,653,127...30,673,006
Ensembl chr 6:30,653,119...30,673,006 		JBrowse link
G DNAAF10 dynein axonemal assembly factor 10 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:68,129,805...68,157,527
Ensembl chr 2:68,122,936...68,157,549 		JBrowse link
G DNAJB2 DnaJ heat shock protein family (Hsp40) member B2 enables IDA (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chr 2:219,279,366...219,286,895
Ensembl chr 2:219,279,342...219,286,898 		JBrowse link
G EPS15 epidermal growth factor receptor pathway substrate 15 enables ISO (PMID:15383614) MGI PMID:15383614 NCBI chr 1:51,354,263...51,519,266
Ensembl chr 1:51,354,263...51,519,328 		JBrowse link
G FAAP20 FA core complex associated protein 20 enables IEA InterPro GO_REF:0000002 NCBI chr 1:2,184,477...2,212,720
Ensembl chr 1:2,184,461...2,212,720 		JBrowse link
G FAF1 Fas associated factor 1 enables IDA
IEA
IBA		 (PMID:18775313) BHF-UCL
TreeGrafter
GO_Central		 PMID:18775313 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:50,437,028...50,960,267
Ensembl chr 1:50,437,028...50,960,267 		JBrowse link
G FAF2 Fas associated factor family member 2 enables IDA
IBA		 (PMID:18775313) BHF-UCL
GO_Central		 PMID:18775313 GO_REF:0000033 NCBI chr 5:176,448,385...176,510,074
Ensembl chr 5:176,447,628...176,510,074 		JBrowse link
G FBXO7 F-box protein 7 enables IDA (PMID:25029497) ParkinsonsUK-UCL PMID:25029497 NCBI chr22:32,474,811...32,498,829
Ensembl chr22:32,474,676...32,498,829 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 enables IBA GO_Central GO_REF:0000033 NCBI chr 4:152,320,544...152,536,092
Ensembl chr 4:152,320,544...152,536,092 		JBrowse link
G GGA1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 enables IEA InterPro GO_REF:0000002 NCBI chr22:37,608,834...37,633,564
Ensembl chr22:37,608,725...37,633,564 		JBrowse link
G GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 enables IEA InterPro GO_REF:0000002 NCBI chr16:23,463,542...23,524,359
Ensembl chr16:23,463,542...23,521,995 		JBrowse link
G GGA3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 enables IDA
IEA		 (PMID:17116753), (PMID:20484053) UniProt
InterPro		 PMID:17116753 PMID:20484053 GO_REF:0000002 NCBI chr17:75,236,599...75,262,363
Ensembl chr17:75,236,599...75,262,363 		JBrowse link
G HDAC6 histone deacetylase 6 enables IEA Ensembl GO_REF:0000107 NCBI chr  X:48,801,398...48,824,982
Ensembl chr  X:48,801,377...48,824,982 		JBrowse link
G HGS hepatocyte growth factor-regulated tyrosine kinase substrate enables IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr17:81,684,011...81,702,121
Ensembl chr17:81,683,326...81,703,138 		JBrowse link
G HSPB1 heat shock protein family B (small) member 1 enables ISO
ISS		 RGD
BHF-UCL		 PMID:12897149 GO_REF:0000024 RGD:1304417 NCBI chr 7:76,302,673...76,304,292
Ensembl chr 7:76,302,673...76,304,295 		JBrowse link
G ILRUN inflammation and lipid regulator with UBA-like and NBR1-like domains enables IBA GO_Central GO_REF:0000033 NCBI chr 6:34,587,288...34,696,767
Ensembl chr 6:34,587,288...34,696,859 		JBrowse link
G JARID2 jumonji and AT-rich interaction domain containing 2 enables IEA Ensembl GO_REF:0000107 NCBI chr 6:15,246,069...15,522,042
Ensembl chr 6:15,246,069...15,522,042 		JBrowse link
G KLF1 KLF transcription factor 1 enables EXP
IMP		 (PMID:24139988) DisProt PMID:24139988 NCBI chr19:12,884,422...12,887,201
Ensembl chr19:12,884,422...12,887,201 		JBrowse link
G MARCHF7 membrane associated ring-CH-type finger 7 enables IEA
IBA
ISS		 Ensembl
TreeGrafter
GO_Central
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:159,712,506...159,771,027
Ensembl chr 2:159,712,457...159,771,027 		JBrowse link
G MARK4 microtubule affinity regulating kinase 4 enables NAS (PMID:14594945) UniProt PMID:14594945 NCBI chr19:45,251,271...45,305,284
Ensembl chr19:45,079,288...45,305,284 		JBrowse link
G MDM2 MDM2 proto-oncogene enables IDA (PMID:29295817) UniProt PMID:29295817 NCBI chr12:68,808,172...68,850,686
Ensembl chr12:68,808,177...68,845,544 		JBrowse link
G MVB12A multivesicular body subunit 12A enables IMP (PMID:20654576) UniProt PMID:20654576 NCBI chr19:17,405,741...17,425,332
Ensembl chr19:17,405,722...17,433,724 		JBrowse link
G MVB12B multivesicular body subunit 12B NOT|enables IDA (PMID:20654576) UniProt PMID:20654576 NCBI chr 9:126,326,829...126,507,040
Ensembl chr 9:126,326,829...126,507,041 		JBrowse link
G N4BP1 NEDD4 binding protein 1 enables IDA (PMID:31319543) UniProt PMID:31319543 NCBI chr16:48,538,726...48,610,180
Ensembl chr16:48,538,726...48,620,148 		JBrowse link
G N4BP2 NEDD4 binding protein 2 enables IEA InterPro GO_REF:0000002 NCBI chr 4:40,056,850...40,190,470
Ensembl chr 4:40,056,797...40,158,252 		JBrowse link
G NBR1 NBR1 autophagy cargo receptor enables IDA
IBA
IEA		 (PMID:19427866) UniProt
GO_Central
TreeGrafter		 PMID:19427866 GO_REF:0000033 GO_REF:0000118 NCBI chr17:43,170,409...43,211,688
Ensembl chr17:43,170,481...43,211,689 		JBrowse link
G NEDD4 NEDD4 E3 ubiquitin protein ligase enables IDA (PMID:9990509) BHF-UCL PMID:9990509 NCBI chr15:55,826,917...55,993,612
Ensembl chr15:55,826,922...55,993,660 		JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 enables IDA (PMID:23300079) UniProt PMID:23300079 NCBI chr 7:30,424,527...30,478,784
Ensembl chr 7:30,424,527...30,478,784 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 enables IDA (PMID:23300079) UniProt PMID:23300079 NCBI chr16:50,693,606...50,733,075
Ensembl chr16:50,693,588...50,733,077 		JBrowse link
G NPLOC4 NPL4 homolog, ubiquitin recognition factor enables IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr17:81,556,885...81,637,112
Ensembl chr17:81,556,887...81,648,465 		JBrowse link
G NSFL1C NSFL1 cofactor enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:1,442,166...1,466,849
Ensembl chr20:1,442,162...1,473,842 		JBrowse link
G NUP62 nucleoporin 62 enables IDA (PMID:8702753) UniProt PMID:8702753 NCBI chr19:49,906,825...49,929,504
Ensembl chr19:49,906,825...49,929,764 		JBrowse link
G OPTN optineurin ISO RGD PMID:21059646 RGD:7775023 NCBI chr10:13,100,082...13,138,308
Ensembl chr10:13,099,449...13,138,308 		JBrowse link
G OTUB1 OTU deubiquitinase, ubiquitin aldehyde binding 1 enables IDA
IBA
IEA		 (PMID:19211026) UniProt
GO_Central
TreeGrafter		 PMID:19211026 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr11:63,986,438...63,998,412
Ensembl chr11:63,985,853...64,001,811 		JBrowse link
G OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2 enables IBA GO_Central GO_REF:0000033 NCBI chr14:94,026,340...94,048,930
Ensembl chr14:94,026,340...94,048,930 		JBrowse link
G OTULINL OTU deubiquitinase with linear linkage specificity like NOT|enables IDA (PMID:31056421) UniProt PMID:31056421 NCBI chr 5:14,581,792...14,616,180
Ensembl chr 5:14,581,792...14,616,180 		JBrowse link
G PLAA phospholipase A2 activating protein enables IBA GO_Central GO_REF:0000033 NCBI chr 9:26,903,372...26,947,242
Ensembl chr 9:26,903,372...26,947,242 		JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase enables IDA (PMID:24784582) UniProt PMID:24784582 NCBI chr 6:161,347,417...162,727,766
Ensembl chr 6:161,347,417...162,727,775 		JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein enables IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr19:12,945,862...12,953,642
Ensembl chr19:12,945,855...12,953,642 		JBrowse link
G RAD23B RAD23 homolog B, nucleotide excision repair protein enables IEA
IBA		 UniProt
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000118 NCBI chr 9:107,283,279...107,332,194
Ensembl chr 9:107,283,137...107,332,192 		JBrowse link
G RAE1 ribonucleic acid export 1 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr20:57,351,255...57,379,202
Ensembl chr20:57,351,223...57,379,211 		JBrowse link
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 enables IDA
IBA		 (PMID:21455181) UniProt
GO_Central		 PMID:21455181 GO_REF:0000033 NCBI chr20:408,299...432,139
Ensembl chr20:407,498...432,139 		JBrowse link
G RNF168 ring finger protein 168 enables IDA
IEA		 (PMID:19203578), (PMID:19203579) UniProt PMID:19203578 PMID:19203579 GO_REF:0000104 NCBI chr 3:196,468,783...196,503,768
Ensembl chr 3:196,468,783...196,503,768 		JBrowse link
G RNF185 ring finger protein 185 enables IDA (PMID:27485036) UniProt PMID:27485036 NCBI chr22:31,160,182...31,207,019
Ensembl chr22:31,160,182...31,207,019 		JBrowse link
G RNF19B ring finger protein 19B enables IDA (PMID:27485036) UniProt PMID:27485036 NCBI chr 1:32,929,036...32,964,809
Ensembl chr 1:32,936,445...32,964,809 		JBrowse link
G RNF216 ring finger protein 216 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 7:5,620,047...5,781,663
Ensembl chr 7:5,620,047...5,781,696 		JBrowse link
G RNF31 ring finger protein 31 enables IDA (PMID:21455181) UniProt PMID:21455181 NCBI chr14:24,146,875...24,160,655
Ensembl chr14:24,146,683...24,160,660 		JBrowse link
G RNF8 ring finger protein 8 enables IEA UniProt GO_REF:0000104 NCBI chr 6:37,353,983...37,394,734
Ensembl chr 6:37,353,979...37,394,734 		JBrowse link
G RNFT1 ring finger protein, transmembrane 1 enables IDA (PMID:27485036) UniProt PMID:27485036 NCBI chr17:59,952,240...59,964,740
Ensembl chr17:59,952,240...59,964,761 		JBrowse link
G SHARPIN SHANK associated RH domain interactor enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:144,098,637...144,103,773
Ensembl chr 8:144,098,633...144,108,124 		JBrowse link
G SIRT2 sirtuin 2 enables IDA (PMID:12697818) UniProt PMID:12697818 NCBI chr19:38,878,555...38,899,618
Ensembl chr19:38,878,555...38,899,862 		JBrowse link
G SMAD3 SMAD family member 3 enables IDA (PMID:18794808) UniProt PMID:18794808 NCBI chr15:67,065,602...67,195,169
Ensembl chr15:67,063,763...67,195,173 		JBrowse link
G SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 enables IEA InterPro GO_REF:0000002 NCBI chr 4:94,207,608...94,291,292
Ensembl chr 4:94,207,611...94,291,292 		JBrowse link
G SPRTN SprT-like N-terminal domain enables IDA (PMID:22681887), (PMID:22894931), (PMID:22902628), (PMID:23042605), (PMID:23042607) UniProt PMID:22681887 PMID:22894931 PMID:22902628 PMID:23042605 PMID:23042607 NCBI chr 1:231,338,293...231,355,023
Ensembl chr 1:231,337,104...231,355,023 		JBrowse link
G SQSTM1 sequestosome 1 enables TAS
IDA		 (PMID:12857745) Reactome
UniProt		 PMID:12857745 Reactome:R-HSA-205008 NCBI chr 5:179,806,393...179,838,078
Ensembl chr 5:179,806,398...179,838,078 		JBrowse link
G STAM signal transducing adaptor molecule enables IEA InterPro GO_REF:0000002 NCBI chr10:17,644,151...17,716,824
Ensembl chr10:17,644,151...17,716,824 		JBrowse link
G STAM2 signal transducing adaptor molecule 2 enables IEA InterPro GO_REF:0000002 NCBI chr 2:152,116,801...152,175,763
Ensembl chr 2:152,116,801...152,175,763 		JBrowse link
G TAB2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 enables IEA InterPro GO_REF:0000002 NCBI chr 6:149,217,926...149,411,607
Ensembl chr 6:149,218,641...149,411,613 		JBrowse link
G TAB3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 enables IEA InterPro GO_REF:0000002 NCBI chr  X:30,827,442...30,889,254
Ensembl chr  X:30,827,442...30,975,084 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 enables IPI (PMID:19285159) BHF-UCL PMID:19285159 NCBI chr 6:137,866,349...137,883,312
Ensembl chr 6:137,867,214...137,883,314 		JBrowse link
G TOLLIP toll interacting protein enables IEA
IBA		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr11:1,274,371...1,309,632
Ensembl chr11:1,274,371...1,309,654 		JBrowse link
G TOM1 target of myb1 membrane trafficking protein enables IEA
IDA		 (PMID:16199040), (PMID:31263572) InterPro
UniProt		 PMID:16199040 PMID:31263572 GO_REF:0000002 NCBI chr22:35,299,275...35,347,973
Ensembl chr22:35,299,275...35,347,992 		JBrowse link
G TOM1L1 target of myb1 like 1 membrane trafficking protein enables IEA
TAS		 (PMID:15611048) InterPro
HGNC-UCL		 PMID:15611048 GO_REF:0000002 NCBI chr17:54,900,852...54,961,956
Ensembl chr17:54,899,387...54,961,956 		JBrowse link
G TOM1L2 target of myb1 like 2 membrane trafficking protein enables IEA InterPro GO_REF:0000002 NCBI chr17:17,843,511...17,972,400
Ensembl chr17:17,843,511...17,972,422 		JBrowse link
G TOP2A DNA topoisomerase II alpha enables IMP (PMID:15965487) UniProt PMID:15965487 NCBI chr17:40,388,525...40,417,896
Ensembl chr17:40,388,525...40,417,896 		JBrowse link
G TP53INP2 tumor protein p53 inducible nuclear protein 2 enables IEA Ensembl GO_REF:0000107 NCBI chr20:34,704,344...34,713,436
Ensembl chr20:34,704,339...34,713,439 		JBrowse link
G TRIM32 tripartite motif containing 32 enables IDA (PMID:19349376) UniProt PMID:19349376 NCBI chr 9:116,687,305...116,701,299
Ensembl chr 9:116,687,305...116,701,300 		JBrowse link
G TSG101 tumor susceptibility 101 enables TAS
IEA
IBA
IDA		 (PMID:15611048)
(PMID:11595185), (PMID:11916981), (PMID:20654576)		 HGNC-UCL
TreeGrafter
GO_Central
UniProt		 PMID:11595185 PMID:11916981 PMID:15611048 PMID:20654576 GO_REF:0000033 GO_REF:0000118 NCBI chr11:18,480,311...18,526,942
Ensembl chr11:18,468,336...18,526,951 		JBrowse link
G UBAP1 ubiquitin associated protein 1 enables IEA
IBA
IDA		 (PMID:21757351) InterPro
TreeGrafter
GO_Central
UniProt		 PMID:21757351 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 9:34,179,005...34,252,523
Ensembl chr 9:34,179,005...34,252,523 		JBrowse link
G UBAP1L ubiquitin associated protein 1 like enables IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr15:65,092,760...65,115,200
Ensembl chr15:65,092,760...65,115,200 		JBrowse link
G UBE2A ubiquitin conjugating enzyme E2 A enables TAS Reactome Reactome:R-HSA-983152 NCBI chr  X:119,574,563...119,584,423
Ensembl chr  X:119,474,802...119,591,083 		JBrowse link
G UBE2L6 ubiquitin conjugating enzyme E2 L6 enables EXP (PMID:15485925) Reactome PMID:15485925 NCBI chr11:57,551,662...57,567,935
Ensembl chr11:57,551,656...57,568,284 		JBrowse link
G UBE2N ubiquitin conjugating enzyme E2 N enables IDA (PMID:16122702) HGNC-UCL PMID:16122702 NCBI chr12:93,405,684...93,441,947
Ensembl chr12:93,405,673...93,441,947 		JBrowse link
G UBR5 ubiquitin protein ligase E3 component n-recognin 5 enables IEA
IDA		 (PMID:17897937), (PMID:37620400) InterPro
UniProt		 PMID:17897937 PMID:37620400 GO_REF:0000002 NCBI chr 8:102,252,273...102,412,700
Ensembl chr 8:102,252,273...102,412,759 		JBrowse link
G UBXN1 UBX domain protein 1 enables IDA (PMID:18775313) BHF-UCL PMID:18775313 NCBI chr11:62,676,500...62,679,073
Ensembl chr11:62,676,498...62,679,117 		JBrowse link
G UBXN10 UBX domain protein 10 enables IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:20,183,331...20,196,050
Ensembl chr 1:20,186,096...20,196,050 		JBrowse link
G UBXN11 UBX domain protein 11 enables IBA GO_Central GO_REF:0000033 NCBI chr 1:26,282,282...26,318,355
Ensembl chr 1:26,281,328...26,318,363 		JBrowse link
G UBXN2A UBX domain protein 2A enables IBA GO_Central GO_REF:0000033 NCBI chr 2:23,927,278...24,004,909
Ensembl chr 2:23,927,285...24,004,909 		JBrowse link
G UBXN2B UBX domain protein 2B enables IBA GO_Central GO_REF:0000033 NCBI chr 8:58,411,361...58,451,501
Ensembl chr 8:58,411,359...58,451,501 		JBrowse link
G UBXN7 UBX domain protein 7 enables IDA
IBA
IEA		 (PMID:18775313) BHF-UCL
GO_Central
TreeGrafter		 PMID:18775313 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:196,347,662...196,432,427
Ensembl chr 3:196,347,662...196,432,430 		JBrowse link
G UBXN8 UBX domain protein 8 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 8:30,729,135...30,767,006
Ensembl chr 8:30,729,131...30,767,006 		JBrowse link
G UCHL1 ubiquitin C-terminal hydrolase L1 enables IEA
IDA		 (PMID:9521656) Ensembl
UniProt		 PMID:9521656 GO_REF:0000107 NCBI chr 4:41,256,928...41,268,455
Ensembl chr 4:41,256,413...41,268,455 		JBrowse link
G UCHL3 ubiquitin C-terminal hydrolase L3 enables IDA (PMID:19154770) UniProt PMID:19154770 NCBI chr13:75,549,502...75,606,020
Ensembl chr13:75,549,483...75,606,020 		JBrowse link
G UEVLD UEV and lactate/malate dehyrogenase domains enables IBA GO_Central GO_REF:0000033 NCBI chr11:18,529,609...18,588,734
Ensembl chr11:18,529,609...18,588,747 		JBrowse link
G USP13 ubiquitin specific peptidase 13 enables IDA (PMID:21659512), (PMID:21811243), (PMID:22216260) UniProt PMID:21659512 PMID:21811243 PMID:22216260 NCBI chr 3:179,653,040...179,789,401
Ensembl chr 3:179,653,032...179,804,366 		JBrowse link
G USP16 ubiquitin specific peptidase 16 enables IEA
IDA		 (PMID:17512543) UniProt PMID:17512543 GO_REF:0000104 NCBI chr21:29,024,668...29,054,488
Ensembl chr21:29,024,629...29,054,488 		JBrowse link
G USP25 ubiquitin specific peptidase 25 enables NAS (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chr21:15,729,982...15,880,064
Ensembl chr21:15,729,982...15,880,064 		JBrowse link
G USP33 ubiquitin specific peptidase 33 NOT|enables IDA (PMID:17766394) UniProt PMID:17766394 NCBI chr 1:77,695,987...77,759,852
Ensembl chr 1:77,695,987...77,759,852 		JBrowse link
G USP5 ubiquitin specific peptidase 5 enables IDA (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chr12:6,852,150...6,866,632
Ensembl chr12:6,852,148...6,866,632 		JBrowse link
G USPL1 ubiquitin specific peptidase like 1 NOT|enables IDA (PMID:22878415) UniProt PMID:22878415 NCBI chr13:30,617,920...30,660,766
Ensembl chr13:30,617,693...30,660,770 		JBrowse link
G VPS28 VPS28 subunit of ESCRT-I enables IDA (PMID:11916981) UniProt PMID:11916981 NCBI chr 8:144,423,617...144,428,548
Ensembl chr 8:144,423,601...144,428,563 		JBrowse link
G VPS36 vacuolar protein sorting 36 homolog enables IMP
IBA
IEA		 (PMID:16973552) UniProt
GO_Central
InterPro
Ensembl		 PMID:16973552 GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr13:52,412,606...52,450,634
Ensembl chr13:52,412,602...52,450,634 		JBrowse link
G WDFY3 WD repeat and FYVE domain containing 3 enables IEA TreeGrafter GO_REF:0000118 NCBI chr 4:84,669,597...84,966,690
Ensembl chr 4:84,668,765...84,966,690 		JBrowse link
G WDR48 WD repeat domain 48 enables IBA
IEA		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:39,052,016...39,096,664
Ensembl chr 3:39,052,013...39,096,671 		JBrowse link
G ZFAND2B zinc finger AN1-type containing 2B enables IEA Ensembl GO_REF:0000107 NCBI chr 2:219,206,782...219,209,648
Ensembl chr 2:219,195,237...219,209,651 		JBrowse link
linear polyubiquitin binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma enables IDA (PMID:23453807), (PMID:27777308) UniProt PMID:23453807 PMID:27777308 NCBI chr  X:154,541,238...154,565,046
Ensembl chr  X:154,541,199...154,565,046 		JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 enables IDA (PMID:35952808) UniProt PMID:35952808 NCBI chr 6:90,513,579...90,587,072
Ensembl chr 6:90,513,573...90,587,086 		JBrowse link
G RNF31 ring finger protein 31 enables IBA GO_Central GO_REF:0000033 NCBI chr14:24,146,875...24,160,655
Ensembl chr14:24,146,683...24,160,660 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19567
    binding 17961
      protein binding 15451
        ubiquitin-like protein binding 128
          ubiquitin binding 108
            linear polyubiquitin binding 3
paths to the root