USP5 (ubiquitin specific peptidase 5) - Rat Genome Database

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Gene: USP5 (ubiquitin specific peptidase 5) Homo sapiens
Analyze
Symbol: USP5
Name: ubiquitin specific peptidase 5
RGD ID: 1318206
HGNC Page HGNC:12628
Description: Enables cysteine-type deubiquitinase activity and ubiquitin binding activity. Involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process and protein K48-linked deubiquitination. Predicted to be located in lysosome. Predicted to be active in cytosol and nucleus.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: deubiquitinating enzyme 5; isopeptidase T; ISOT; testicular tissue protein Li 218; ubiquitin carboxyl-terminal hydrolase 5; ubiquitin isopeptidase T; ubiquitin specific peptidase 5 (isopeptidase T); ubiquitin specific protease 5 (isopeptidase T); ubiquitin thioesterase 5; ubiquitin thiolesterase 5; ubiquitin-specific protease-5 (ubiquitin isopeptidase T); ubiquitin-specific-processing protease 5
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,852,150 - 6,866,632 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl126,852,148 - 6,866,632 (+)EnsemblGRCh38hg38GRCh38
GRCh37126,961,314 - 6,975,796 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,831,546 - 6,846,057 (+)NCBINCBI36Build 36hg18NCBI36
Build 34126,831,583 - 6,846,054NCBI
Celera128,578,571 - 8,593,082 (+)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef126,815,013 - 6,829,524 (+)NCBIHuRef
CHM1_1126,960,283 - 6,974,794 (+)NCBICHM1_1
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytosol  (IBA,TAS)
lysosome  (TAS)
nucleus  (IBA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7498549   PMID:7578059   PMID:7851534   PMID:8723724   PMID:8841133   PMID:9074930   PMID:9827704   PMID:11337467   PMID:11771738   PMID:12427038   PMID:12435595   PMID:12477932  
PMID:12838346   PMID:14718574   PMID:15096053   PMID:15146197   PMID:15231748   PMID:15489334   PMID:16007098   PMID:16189514   PMID:16564012   PMID:16712842   PMID:16964243   PMID:17148452  
PMID:17550899   PMID:17692280   PMID:17980597   PMID:18029348   PMID:18482987   PMID:19013454   PMID:19098288   PMID:19156909   PMID:19285159   PMID:19373254   PMID:19615732   PMID:20622874  
PMID:20804422   PMID:21832049   PMID:21873635   PMID:21976412   PMID:22079093   PMID:22118674   PMID:22216260   PMID:22283393   PMID:22428841   PMID:22451720   PMID:22586326   PMID:22626734  
PMID:22658674   PMID:22863883   PMID:22878415   PMID:22939629   PMID:23105109   PMID:23287719   PMID:23314748   PMID:23375434   PMID:23563141   PMID:23720098   PMID:23751493   PMID:24424410  
PMID:24454762   PMID:24681967   PMID:25207809   PMID:25416956   PMID:25641936   PMID:25889575   PMID:25921289   PMID:25970461   PMID:26142280   PMID:26235645   PMID:26344197   PMID:26508657  
PMID:26638075   PMID:26777405   PMID:26876099   PMID:26912724   PMID:27066941   PMID:27130589   PMID:27133717   PMID:27613037   PMID:27848959   PMID:28190767   PMID:28380382   PMID:28515276  
PMID:28675297   PMID:28807830   PMID:28846114   PMID:28933784   PMID:29117863   PMID:29467282   PMID:29567855   PMID:29576527   PMID:30110629   PMID:30196744   PMID:30575818   PMID:30809294  
PMID:30833792   PMID:31048545   PMID:31067491   PMID:31073040   PMID:31091453   PMID:31197245   PMID:31281542   PMID:31300459   PMID:31343991   PMID:31371702   PMID:31410188   PMID:31455361  
PMID:31541095   PMID:31586073   PMID:31663737   PMID:31699778   PMID:31727867   PMID:31732153   PMID:31871319   PMID:31950832   PMID:31951392   PMID:31980649   PMID:32214906   PMID:32296183  
PMID:32416067   PMID:32683298   PMID:32786267   PMID:32807901   PMID:32842143   PMID:33060560   PMID:33141564   PMID:33217317   PMID:33319070   PMID:33377647   PMID:33658627   PMID:33669244  
PMID:33961781   PMID:33977498   PMID:34114341   PMID:34315543   PMID:34483932   PMID:34486483   PMID:34642328   PMID:34648286   PMID:34741014   PMID:34761751   PMID:34858787   PMID:34917906  
PMID:35013556   PMID:35032548   PMID:35102545   PMID:35253629   PMID:35331737   PMID:35831314   PMID:35895711  


Genomics

Comparative Map Data
USP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,852,150 - 6,866,632 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl126,852,148 - 6,866,632 (+)EnsemblGRCh38hg38GRCh38
GRCh37126,961,314 - 6,975,796 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,831,546 - 6,846,057 (+)NCBINCBI36Build 36hg18NCBI36
Build 34126,831,583 - 6,846,054NCBI
Celera128,578,571 - 8,593,082 (+)NCBICelera
Cytogenetic Map12p13.31NCBI
HuRef126,815,013 - 6,829,524 (+)NCBIHuRef
CHM1_1126,960,283 - 6,974,794 (+)NCBICHM1_1
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBIT2T-CHM13v2.0
Usp5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396124,791,982 - 124,806,447 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6124,791,982 - 124,806,447 (-)EnsemblGRCm39 Ensembl
GRCm386124,815,019 - 124,829,484 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6124,815,019 - 124,829,484 (-)EnsemblGRCm38mm10GRCm38
MGSCv376124,765,037 - 124,779,465 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366124,780,638 - 124,795,066 (-)NCBIMGSCv36mm8
Celera6126,491,148 - 126,505,576 (-)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.17NCBI
Usp5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24157,619,643 - 157,634,711 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4157,619,643 - 157,634,711 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4163,847,808 - 163,862,942 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.04159,630,718 - 159,645,852 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.04158,266,340 - 158,281,358 (-)NCBIRnor_WKY
Rnor_6.04157,332,735 - 157,347,803 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4157,332,740 - 157,347,803 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04224,350,331 - 224,365,479 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44160,937,706 - 160,952,769 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera4146,357,626 - 146,372,628 (-)NCBICelera
Cytogenetic Map4q42NCBI
Usp5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554134,451,622 - 4,466,832 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554134,451,530 - 4,466,832 (+)NCBIChiLan1.0ChiLan1.0
USP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1126,895,416 - 6,909,936 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl126,895,416 - 6,909,936 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0126,983,941 - 6,998,469 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
USP5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,158,850 - 38,172,689 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,158,834 - 38,172,071 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,444,116 - 8,457,897 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02738,511,741 - 38,525,542 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2738,511,746 - 38,524,959 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12738,385,805 - 38,399,013 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02738,426,829 - 38,440,619 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0277,922,848 - 7,936,630 (+)NCBIUU_Cfam_GSD_1.0
Usp5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945102,284,676 - 102,298,641 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936709952,225 - 966,429 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
USP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl563,843,745 - 63,858,716 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1563,843,742 - 63,858,835 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,279,250 - 66,294,259 (-)NCBISscrofa10.2Sscrofa10.2susScr3
USP5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1116,885,401 - 6,899,983 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl116,885,311 - 6,898,442 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660631,323,576 - 1,338,147 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Usp5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248603,519,113 - 3,532,687 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248603,519,106 - 3,532,690 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Position Markers
RH48309  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37126,967,724 - 6,967,853UniSTSGRCh37
Build 36126,837,985 - 6,838,114RGDNCBI36
Celera128,585,010 - 8,585,139RGD
Cytogenetic Map12p13UniSTS
HuRef126,821,452 - 6,821,581UniSTS
GeneMap99-GB4 RH Map1243.35UniSTS
NCBI RH Map1294.1UniSTS
RH78311  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37126,975,611 - 6,975,762UniSTSGRCh37
Build 36126,845,872 - 6,846,023RGDNCBI36
Celera128,592,897 - 8,593,048RGD
Cytogenetic Map12p13UniSTS
HuRef126,829,339 - 6,829,490UniSTS
GeneMap99-GB4 RH Map1243.35UniSTS
NCBI RH Map1294.1UniSTS
SHGC-32489  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37126,975,636 - 6,975,783UniSTSGRCh37
Build 36126,845,897 - 6,846,044RGDNCBI36
Celera128,592,922 - 8,593,069RGD
Cytogenetic Map12p13UniSTS
HuRef126,829,364 - 6,829,511UniSTS
GeneMap99-GB4 RH Map1243.69UniSTS
Whitehead-RH Map1275.3UniSTS
GeneMap99-G3 RH Map12439.0UniSTS
MARC_7181-7182:996687603:1  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37126,973,227 - 6,973,962UniSTSGRCh37
Build 36126,843,488 - 6,844,223RGDNCBI36
Celera128,590,513 - 8,591,248RGD
HuRef126,826,955 - 6,827,690UniSTS
USP5__5052  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37126,975,154 - 6,975,797UniSTSGRCh37
Build 36126,845,415 - 6,846,058RGDNCBI36
Celera128,592,440 - 8,593,083RGD
HuRef126,828,882 - 6,829,525UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2573
Count of miRNA genes:777
Interacting mature miRNAs:947
Transcripts:ENST00000229268, ENST00000389231, ENST00000535080, ENST00000537267, ENST00000541969, ENST00000542087, ENST00000542371
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 1
Medium 2437 2513 1694 594 1578 435 4357 2100 3661 412 1460 1609 175 1 1204 2788 6 2
Low 2 478 32 30 373 30 97 73 7 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001098536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001382588 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001382589 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001382590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001382591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_003481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_168458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI289395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU099996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC005139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN276110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM005531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KC877513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U35116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U47924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U47927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X91349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000229268   ⟹   ENSP00000229268
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl126,852,150 - 6,866,632 (+)Ensembl
RefSeq Acc Id: ENST00000389231   ⟹   ENSP00000373883
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl126,852,148 - 6,866,620 (+)Ensembl
RefSeq Acc Id: ENST00000535080
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl126,856,856 - 6,858,826 (+)Ensembl
RefSeq Acc Id: ENST00000537267
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl126,857,401 - 6,866,632 (+)Ensembl
RefSeq Acc Id: ENST00000541969
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl126,860,464 - 6,863,916 (+)Ensembl
RefSeq Acc Id: ENST00000542087   ⟹   ENSP00000444668
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl126,852,153 - 6,861,090 (+)Ensembl
RefSeq Acc Id: ENST00000542371
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl126,863,336 - 6,866,104 (+)Ensembl
RefSeq Acc Id: NM_001098536   ⟹   NP_001092006
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
GRCh37126,961,285 - 6,975,796 (+)ENTREZGENE
Build 36126,831,546 - 6,846,057 (+)NCBI Archive
HuRef126,815,013 - 6,829,524 (+)ENTREZGENE
CHM1_1126,960,283 - 6,974,794 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001382588   ⟹   NP_001369517
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001382589   ⟹   NP_001369518
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001382590   ⟹   NP_001369519
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001382591   ⟹   NP_001369520
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NM_003481   ⟹   NP_003472
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
GRCh37126,961,285 - 6,975,796 (+)ENTREZGENE
Build 36126,831,552 - 6,846,057 (+)NCBI Archive
HuRef126,815,013 - 6,829,524 (+)ENTREZGENE
CHM1_1126,960,289 - 6,974,794 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168449
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168450
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168451
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168452
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168454
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168455
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168456
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168457
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
RefSeq Acc Id: NR_168458
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,866,632 (+)NCBI
T2T-CHM13v2.0126,861,449 - 6,875,929 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001092006   ⟸   NM_001098536
- Peptide Label: isoform 1
- UniProtKB: Q96J22 (UniProtKB/Swiss-Prot),   P45974 (UniProtKB/Swiss-Prot),   A0A140VJZ1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_003472   ⟸   NM_003481
- Peptide Label: isoform 2
- UniProtKB: P45974 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001369519   ⟸   NM_001382590
- Peptide Label: isoform 5
RefSeq Acc Id: NP_001369520   ⟸   NM_001382591
- Peptide Label: isoform 6
RefSeq Acc Id: NP_001369517   ⟸   NM_001382588
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001369518   ⟸   NM_001382589
- Peptide Label: isoform 4
RefSeq Acc Id: ENSP00000444668   ⟸   ENST00000542087
RefSeq Acc Id: ENSP00000229268   ⟸   ENST00000229268
RefSeq Acc Id: ENSP00000373883   ⟸   ENST00000389231
Protein Domains
UBA   UBP-type   USP   zf-UBP_var

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P45974-F1-model_v2 AlphaFold P45974 1-858 view protein structure

Promoters
RGD ID:6790653
Promoter ID:HG_KWN:14855
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001098536,   UC001QRH.2
Position:
Human AssemblyChrPosition (strand)Source
Build 36126,830,841 - 6,831,787 (+)MPROMDB
RGD ID:6853036
Promoter ID:EP74339
Type:initiation region
Name:HS_USP5
Description:Ubiquitin specific protease 5 (isopeptidase T).
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 36126,831,557 - 6,831,617EPD
RGD ID:7222963
Promoter ID:EPDNEW_H17227
Type:initiation region
Name:USP5_1
Description:ubiquitin specific peptidase 5
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38126,852,150 - 6,852,210EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 12p13.33-11.22(chr12:121055-28415184)x1 copy number loss See cases [RCV000052776] Chr12:121055..28415184 [GRCh38]
Chr12:282465..28568117 [GRCh37]
Chr12:100482..28459384 [NCBI36]
Chr12:12p13.33-11.22
pathogenic
GRCh38/hg38 12p13.31(chr12:6728665-7705620)x1 copy number loss See cases [RCV000052779] Chr12:6728665..7705620 [GRCh38]
Chr12:6837831..7858216 [GRCh37]
Chr12:6708092..7749483 [NCBI36]
Chr12:12p13.31
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:77187-34380176)x3 copy number gain See cases [RCV000053660] Chr12:77187..34380176 [GRCh38]
Chr12:282465..34533111 [GRCh37]
Chr12:56614..34424378 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-12.1(chr12:80412-25470329)x3 copy number gain See cases [RCV000053662] Chr12:80412..25470329 [GRCh38]
Chr12:282465..25623263 [GRCh37]
Chr12:59839..25514530 [NCBI36]
Chr12:12p13.33-12.1
pathogenic
GRCh38/hg38 12p13.33-13.31(chr12:121055-7272606)x3 copy number gain See cases [RCV000053663] Chr12:121055..7272606 [GRCh38]
Chr12:282465..7425202 [GRCh37]
Chr12:100482..7316469 [NCBI36]
Chr12:12p13.33-13.31
pathogenic
GRCh38/hg38 12p13.33-13.31(chr12:121255-8361746)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053664]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053664]|See cases [RCV000053664] Chr12:121255..8361746 [GRCh38]
Chr12:282465..8514342 [GRCh37]
Chr12:100682..8405609 [NCBI36]
Chr12:12p13.33-13.31
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:212976-33926913)x4 copy number gain See cases [RCV000053666] Chr12:212976..33926913 [GRCh38]
Chr12:322142..34079848 [GRCh37]
Chr12:192403..33971115 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
NM_001098536.1(USP5):c.1797C>T (p.Ile599=) single nucleotide variant Malignant melanoma [RCV000062590] Chr12:6863220 [GRCh38]
Chr12:6972384 [GRCh37]
Chr12:6842645 [NCBI36]
Chr12:12p13.31
not provided
GRCh38/hg38 12p13.33-13.31(chr12:45740-6945196)x3 copy number gain See cases [RCV000135350] Chr12:45740..6945196 [GRCh38]
Chr12:147099..7054359 [GRCh37]
Chr12:17360..6924620 [NCBI36]
Chr12:12p13.33-13.31
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:121255-34603274)x3 copy number gain See cases [RCV000136611] Chr12:121255..34603274 [GRCh38]
Chr12:282465..34756209 [GRCh37]
Chr12:100682..34647476 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-12.3(chr12:2871741-14987348)x3 copy number gain See cases [RCV000137694] Chr12:2871741..14987348 [GRCh38]
Chr12:2980907..15140282 [GRCh37]
Chr12:2851168..15031549 [NCBI36]
Chr12:12p13.33-12.3
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:121271-34603261)x3 copy number gain See cases [RCV000139052] Chr12:121271..34603261 [GRCh38]
Chr12:282465..34756196 [GRCh37]
Chr12:100698..34647463 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:54427-34608071)x4 copy number gain See cases [RCV000139787] Chr12:54427..34608071 [GRCh38]
Chr12:282465..34761006 [GRCh37]
Chr12:33854..34652273 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh38/hg38 12p13.33-q24.33(chr12:121271-133196807)x3 copy number gain See cases [RCV000139555] Chr12:121271..133196807 [GRCh38]
Chr12:282465..133773393 [GRCh37]
Chr12:100698..132283466 [NCBI36]
Chr12:12p13.33-q24.33
pathogenic
GRCh38/hg38 12p13.33-12.2(chr12:1258274-20657577)x3 copy number gain See cases [RCV000141905] Chr12:1258274..20657577 [GRCh38]
Chr12:1367440..20810511 [GRCh37]
Chr12:1237701..20701778 [NCBI36]
Chr12:12p13.33-12.2
pathogenic
GRCh38/hg38 12p13.33-11.1(chr12:64620-34682902)x4 copy number gain See cases [RCV000142149] Chr12:64620..34682902 [GRCh38]
Chr12:173786..34835837 [GRCh37]
Chr12:44047..34727104 [NCBI36]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:148034-34178799)x4 copy number gain See cases [RCV000240164] Chr12:148034..34178799 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:1-133851895)x3 copy number gain See cases [RCV000258805] Chr12:1..133851895 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic|likely pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:89061-34178799)x3 copy number gain See cases [RCV000240487] Chr12:89061..34178799 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869301)x3 copy number gain See cases [RCV000449191] Chr12:173786..37869301 [GRCh37]
Chr12:12p13.33-q11
pathogenic
GRCh37/hg19 12p13.33-12.1(chr12:173786-25286865)x3 copy number gain See cases [RCV000449287] Chr12:173786..25286865 [GRCh37]
Chr12:12p13.33-12.1
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x3 copy number gain See cases [RCV000447551] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-12.2(chr12:173786-20026080)x3 copy number gain See cases [RCV000446050] Chr12:173786..20026080 [GRCh37]
Chr12:12p13.33-12.2
pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:173786-8257049)x3 copy number gain See cases [RCV000446749] Chr12:173786..8257049 [GRCh37]
Chr12:12p13.33-13.31
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:189578-34756150) copy number gain See cases [RCV000446017] Chr12:189578..34756150 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902)x3 copy number gain See cases [RCV000510482] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:173787-133777902) copy number gain See cases [RCV000511643] Chr12:173787..133777902 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:565369-34835837)x3 copy number gain See cases [RCV000511580] Chr12:565369..34835837 [GRCh37]
Chr12:12p13.33-11.1
likely pathogenic
GRCh37/hg19 12p13.33-13.2(chr12:173786-11677456)x3 copy number gain See cases [RCV000510853] Chr12:173786..11677456 [GRCh37]
Chr12:12p13.33-13.2
pathogenic
GRCh37/hg19 12p13.33-11.22(chr12:173786-28219229)x3 copy number gain See cases [RCV000510961] Chr12:173786..28219229 [GRCh37]
Chr12:12p13.33-11.22
pathogenic
GRCh37/hg19 12p13.33-q11(chr12:173786-37869107)x3 copy number gain not provided [RCV000683480] Chr12:173786..37869107 [GRCh37]
Chr12:12p13.33-q11
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x2,3 copy number gain not provided [RCV000683478] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:191242-8122785)x3 copy number gain not provided [RCV000683477] Chr12:191242..8122785 [GRCh37]
Chr12:12p13.33-13.31
pathogenic
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837)x3 copy number gain not provided [RCV000683479] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:191619-133777645)x3 copy number gain not provided [RCV000750246] Chr12:191619..133777645 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-q24.33(chr12:621220-133779118)x3 copy number gain not provided [RCV000750253] Chr12:621220..133779118 [GRCh37]
Chr12:12p13.33-q24.33
pathogenic
GRCh37/hg19 12p13.33-11.21(chr12:191619-31733044)x3 copy number gain not provided [RCV000750245] Chr12:191619..31733044 [GRCh37]
Chr12:12p13.33-11.21
pathogenic
GRCh37/hg19 12p13.31(chr12:6911437-9381254)x3 copy number gain not provided [RCV000750277] Chr12:6911437..9381254 [GRCh37]
Chr12:12p13.31
uncertain significance
NM_001098536.2(USP5):c.54C>T (p.Val18=) single nucleotide variant not provided [RCV000965230] Chr12:6852233 [GRCh38]
Chr12:6961397 [GRCh37]
Chr12:12p13.31
benign
NC_000012.11:g.(?_6438458)_(7362839_?)dup duplication Peroxisome biogenesis disorder 2B [RCV001031288] Chr12:6438458..7362839 [GRCh37]
Chr12:12p13.31
uncertain significance
NC_000012.12:g.(1_3750000)_(5250000_9000000)del deletion Tumoral calcinosis, hyperphosphatemic, familial, 1 [RCV000758697] Chr12:3750000..5250000 [GRCh38]
Chr12:12p13.33-13.31
pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:237588-8278292) copy number gain not provided [RCV000767818] Chr12:237588..8278292 [GRCh37]
Chr12:12p13.33-13.31
pathogenic
GRCh37/hg19 12p13.33-12.3(chr12:189216-15001420) copy number gain not provided [RCV000767817] Chr12:189216..15001420 [GRCh37]
Chr12:12p13.33-12.3
pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:189216-8185497) copy number gain not provided [RCV000767819] Chr12:189216..8185497 [GRCh37]
Chr12:12p13.33-13.31
pathogenic
NM_001098536.2(USP5):c.1138C>T (p.Leu380=) single nucleotide variant not provided [RCV000962239] Chr12:6860158 [GRCh38]
Chr12:6969322 [GRCh37]
Chr12:12p13.31
benign
NM_001098536.2(USP5):c.1827C>T (p.Pro609=) single nucleotide variant not provided [RCV000962240] Chr12:6863250 [GRCh38]
Chr12:6972414 [GRCh37]
Chr12:12p13.31
benign
NC_000012.11:g.(?_6945914)_(9027627_?)dup duplication Temtamy syndrome [RCV000816630] Chr12:6945914..9027627 [GRCh37]
Chr12:12p13.31
uncertain significance
GRCh37/hg19 12p13.33-13.31(chr12:173786-8393815)x3 copy number gain not provided [RCV000846343] Chr12:173786..8393815 [GRCh37]
Chr12:12p13.33-13.31
pathogenic
GRCh37/hg19 12p13.31(chr12:6872484-7009333)x3 copy number gain not provided [RCV000846291] Chr12:6872484..7009333 [GRCh37]
Chr12:12p13.31
uncertain significance
GRCh37/hg19 12p13.33-11.1(chr12:173786-34496628)x3 copy number gain not provided [RCV000847209] Chr12:173786..34496628 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-q11(chr12:274676-37869301)x4 copy number gain not provided [RCV001006470] Chr12:274676..37869301 [GRCh37]
Chr12:12p13.33-q11
pathogenic
NM_001098536.2(USP5):c.261C>T (p.Gly87=) single nucleotide variant not provided [RCV000907843] Chr12:6855778 [GRCh38]
Chr12:6964942 [GRCh37]
Chr12:12p13.31
benign
NM_001098536.2(USP5):c.1465C>T (p.Leu489=) single nucleotide variant not provided [RCV000903781] Chr12:6861073 [GRCh38]
Chr12:6970237 [GRCh37]
Chr12:12p13.31
benign
NC_000012.11:g.(?_6945914)_(8248706_?)dup duplication Temtamy syndrome [RCV001031096] Chr12:6945914..8248706 [GRCh37]
Chr12:12p13.31
uncertain significance
NC_000012.11:g.(?_6945914)_(9027627_?)dup duplication Developmental and epileptic encephalopathy, 21 [RCV001325295]|Klippel-Feil syndrome 3, autosomal dominant [RCV001301079]|Temtamy syndrome [RCV000816630]|not provided [RCV001859243] Chr12:6945914..9027627 [GRCh37]
Chr12:12p13.31
uncertain significance
NC_000012.11:g.(?_6438478)_(7362819_?)dup duplication Temtamy syndrome [RCV001365174] Chr12:6438478..7362819 [GRCh37]
Chr12:12p13.31
uncertain significance
GRCh37/hg19 12p13.33-13.31(chr12:189145-7730395)x3 copy number gain not provided [RCV001537906] Chr12:189145..7730395 [GRCh37]
Chr12:12p13.33-13.31
pathogenic
GRCh37/hg19 12p13.33-13.31(chr12:146240-8330229)x3 copy number gain Obesity [RCV001801197] Chr12:146240..8330229 [GRCh37]
Chr12:12p13.33-13.31
pathogenic
NC_000012.11:g.(?_6438478)_(8248686_?)dup duplication TNF receptor-associated periodic fever syndrome (TRAPS) [RCV001913768]|not provided [RCV001913769] Chr12:6438478..8248686 [GRCh37]
Chr12:12p13.31
uncertain significance
GRCh37/hg19 12p13.31(chr12:6872634-7244086) copy number gain not specified [RCV002052969] Chr12:6872634..7244086 [GRCh37]
Chr12:12p13.31
uncertain significance
NC_000012.11:g.(?_6438478)_(8756953_?)dup duplication not provided [RCV001970781] Chr12:6438478..8756953 [GRCh37]
Chr12:12p13.31
uncertain significance
GRCh37/hg19 12p13.33-11.1(chr12:173786-34835837) copy number gain not specified [RCV002052957] Chr12:173786..34835837 [GRCh37]
Chr12:12p13.33-11.1
pathogenic
GRCh37/hg19 12p13.33-12.1(chr12:173786-25286865) copy number gain not specified [RCV002052955] Chr12:173786..25286865 [GRCh37]
Chr12:12p13.33-12.1
pathogenic
GRCh37/hg19 12p13.31(chr12:6530146-7376398) copy number gain not specified [RCV002052968] Chr12:6530146..7376398 [GRCh37]
Chr12:12p13.31
uncertain significance
GRCh37/hg19 12p13.33-q11(chr12:173786-37869301) copy number gain not specified [RCV002052958] Chr12:173786..37869301 [GRCh37]
Chr12:12p13.33-q11
pathogenic
NC_000012.11:g.(?_6950452)_(6979547_?)dup duplication not provided [RCV001877620] Chr12:6950452..6979547 [GRCh37]
Chr12:12p13.31
uncertain significance
NC_000012.11:g.(?_6438478)_(9027607_?)dup duplication not provided [RCV001943267] Chr12:6438478..9027607 [GRCh37]
Chr12:12p13.31
uncertain significance
NC_000012.11:g.(?_6945914)_(7362819_?)dup duplication not provided [RCV001943326] Chr12:6945914..7362819 [GRCh37]
Chr12:12p13.31
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:12628 AgrOrtholog
COSMIC USP5 COSMIC
Ensembl Genes ENSG00000111667 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000229268 ENTREZGENE
  ENSP00000229268.8 UniProtKB/Swiss-Prot
  ENSP00000373883 ENTREZGENE
  ENSP00000373883.5 UniProtKB/Swiss-Prot
  ENSP00000444668.1 UniProtKB/TrEMBL
Ensembl Transcript ENST00000229268 ENTREZGENE
  ENST00000229268.13 UniProtKB/Swiss-Prot
  ENST00000389231 ENTREZGENE
  ENST00000389231.9 UniProtKB/Swiss-Prot
  ENST00000542087.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000111667 GTEx
HGNC ID HGNC:12628 ENTREZGENE
Human Proteome Map USP5 Human Proteome Map
InterPro Papain-like_cys_pep_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peptidase_C19_UCH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBA-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitinyl_hydrolase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBP13_Znf-UBP_var UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UBP5_UBA1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  USP_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  USP_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_UBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:8078 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 8078 ENTREZGENE
OMIM 601447 OMIM
Pfam UBA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UCH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-UBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-UBP_var UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA37253 PharmGKB
PIRSF UBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE UBA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  USP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  USP_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  USP_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_UBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART UBA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZnF_UBP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF46934 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF54001 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140VJZ1 ENTREZGENE, UniProtKB/TrEMBL
  F5H571_HUMAN UniProtKB/TrEMBL
  P45974 ENTREZGENE
  Q96J22 ENTREZGENE
  UBP5_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary D3DUS7 UniProtKB/Swiss-Prot
  D3DUS8 UniProtKB/Swiss-Prot
  Q96J22 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-12 USP5  ubiquitin specific peptidase 5    ubiquitin specific peptidase 5 (isopeptidase T)  Symbol and/or name change 5135510 APPROVED