USP5 (ubiquitin specific peptidase 5)

Gene: USP5 (ubiquitin specific peptidase 5) Pan paniscus

Analyze

Symbol:

USP5

Name:

ubiquitin specific peptidase 5

RGD ID:

11966293

Description:

ENCODES a protein that exhibits cysteine-type deubiquitinase activity (inferred); cysteine-type peptidase activity (inferred); hydrolase activity (inferred); INVOLVED IN regulation protein catabolic process at presynapse (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); developmental and epileptic encephalopathy 21 (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ubiquitin carboxyl-terminal hydrolase 5

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	12,414,488 - 12,429,794 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	12,411,246 - 12,426,552 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	6,983,941 - 6,998,469 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	6,895,416 - 6,909,936 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	6,895,416 - 6,909,936 (+)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chemical and Drug Induced Liver Injury (ISO)

developmental and epileptic encephalopathy 21 (ISO)

genetic disease (ISO)

Hyperphosphatemic Familial Tumoral Calcinosis 1 (ISO)

Klippel-Feil syndrome 3 (ISO)

lymphoproliferative syndrome 2 (ISO)

peroxisome biogenesis disorder 2B (ISO)

Temtamy syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of ubiquitin-dependent protein catabolic process (IEA)

positive regulation of proteasomal ubiquitin-dependent protein catabolic process (IEA)

protein metabolic process (IEA)

proteolysis (IEA)

regulation protein catabolic process at presynapse (ISO)

Molecular Function

cysteine-type deubiquitinase activity (IEA)

cysteine-type peptidase activity (IEA)

hydrolase activity (IEA)

metal ion binding (IEA)

peptidase activity (IEA)

protein binding (ISO)

ubiquitin binding (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

USP5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	12,414,488 - 12,429,794 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	12,411,246 - 12,426,552 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	6,983,941 - 6,998,469 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	6,895,416 - 6,909,936 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	6,895,416 - 6,909,936 (+)	Ensembl	panpan1.1		panPan2

USP5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	6,852,150 - 6,866,632 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	6,852,148 - 6,866,632 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	6,961,314 - 6,975,796 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	6,831,546 - 6,846,057 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	6,831,583 - 6,846,054	NCBI
Celera	12	8,578,571 - 8,593,082 (+)	NCBI		Celera
Cytogenetic Map	12	p13.31	NCBI
HuRef	12	6,815,013 - 6,829,524 (+)	NCBI		HuRef
CHM1_1	12	6,960,283 - 6,974,794 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	6,861,449 - 6,875,929 (+)	NCBI		T2T-CHM13v2.0

Usp5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	124,791,982 - 124,806,404 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	124,791,982 - 124,806,447 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	124,815,019 - 124,829,484 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	124,815,019 - 124,829,484 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	124,765,037 - 124,779,465 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	124,780,638 - 124,795,066 (-)	NCBI		MGSCv36	mm8
Celera	6	126,491,148 - 126,505,576 (-)	NCBI		Celera
Cytogenetic Map	6	F2	NCBI
cM Map	6	59.17	NCBI

Usp5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	159,305,927 - 159,321,345 (-)	NCBI		GRCr8
mRatBN7.2	4	157,619,663 - 157,634,681 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	157,619,643 - 157,634,711 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	163,847,808 - 163,862,942 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	159,630,718 - 159,645,852 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	158,266,340 - 158,281,358 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	157,332,735 - 157,347,803 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	157,332,740 - 157,347,803 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	224,350,331 - 224,365,479 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	160,937,706 - 160,952,769 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	146,357,626 - 146,372,628 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

Usp5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	4,451,622 - 4,466,832 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	4,451,530 - 4,466,832 (+)	NCBI	ChiLan1.0	ChiLan1.0

USP5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	38,158,850 - 38,172,689 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	38,158,834 - 38,172,071 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	8,444,116 - 8,457,897 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	38,511,741 - 38,525,542 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	38,511,746 - 38,524,959 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	38,385,805 - 38,399,013 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	38,426,829 - 38,440,619 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	7,922,848 - 7,936,630 (+)	NCBI		UU_Cfam_GSD_1.0

Usp5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	102,284,676 - 102,298,641 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936709	952,182 - 966,498 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936709	952,225 - 966,429 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

USP5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	63,843,745 - 63,858,716 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	63,843,742 - 63,858,835 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	66,279,250 - 66,294,259 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

USP5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	6,885,401 - 6,899,983 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	6,885,311 - 6,898,442 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	1,323,576 - 1,338,147 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Usp5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624860	3,519,113 - 3,532,687 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624860	3,519,106 - 3,532,690 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003820274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_003820275	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSPPAT00000052654 ⟹ ENSPPAP00000029803

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	12	6,895,416 - 6,909,936 (+)	Ensembl

RefSeq Acc Id:

XM_003820274 ⟹ XP_003820322

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	12,414,488 - 12,429,794 (+)	NCBI
NHGRI_mPanPan1	12	12,411,246 - 12,426,552 (+)	NCBI
Mhudiblu_PPA_v0	12	6,983,941 - 6,998,469 (+)	NCBI
PanPan1.1	12	6,895,416 - 6,909,936 (+)	NCBI

Sequence:

show sequence

GGCAGGGGAGGGGACTGGGAACGGTGGGAGCCGCCGTGTGTGGAGAAGCTGCTGCCGGTGTCAT
GGCGGAGCTGAGTGAGGAGGCGCTGCTGTCAGTATTACCGACGATCCGGGTCCCTAAGGCTGGA
GACCGGGTCCACAAAGACGAGTGCGCCTTCTCCTTCGACACGCCGGAGTCTGAGGGGGGCCTCT
ACATCTGTATGAACACGTTTCTGGGCTTCGGGAAACAGTATGTGGAGAGACATTTCAATAAGAC
CGGCCAGCGAGTCTACTTGCACCTCCGGCGGACCCGGCGCCCGAAAGAGGAGGACCCTGCTACA
GGCACTGGAGACCCACCCCGGAAGAAGCCCACGCGGCTGGCTATTGGTGTTGAAGGCGGGTTTG
ACCTTAGCGAGGAGAAGTTTGAATTAGACGAGGATGTGAAGATTGTCATTTTGCCAGATTACCT
GGAGATTGCCCGGGATGGACTCGGGGGACTGCCTGACATTGTCAGAGATCGGGTGACCAGTGCA
GTGGAGGCCCTACTGTCGGCCGACTCAGCCTCCCGCAAGCAGGAGGTGCAGGCATGGGATGGGG
AAGTACGGCAGGTGTCTAAGCATGCCTTCAGCCTCAAGCAGTTGGACAACCCTGCTCGAATCCC
TCCCTGTGGCTGGAAGTGCTCCAAGTGTGACATGAGAGAGAACCTGTGGCTCAACCTGACTGAT
GGCTCCATCCTCTGTGGGCGACGCTACTTCGACGGCAGTGGGGGCAACAACCACGCTGTGGAGC
ACTACCGAGAGACAGGCTACCCGTTAGCTGTCAAGCTGGGCACCATCACCCCTGATGGAGCTGA
CGTGTACTCATATGATGAGGATGACATGGTCCTGGACCCCAGCCTGGCTGAGCACCTGTCCCAC
TTCGGCATCGACATGCTGAAGATGCAGAAGACAGACAAGACGATGACTGAGTTGGAGATAGACA
TGAACCAGCGGATTGGTGAATGGGAGCTGATCCAGGAGTCGGGTGTGCCACTCAAGCCCCTGTT
TGGGCCTGGCTACACAGGCATCCGGAACCTGGGTAACAGCTGCTACCTCAACTCTGTGGTCCAG
GTGCTCTTCAGCATCCCTGACTTCCAGAGGAAGTATGTGGATAAGCTGGAGAAGATCTTCCAGA
ATGCCCCGACGGACCCTACCCAGGATTTCAGCACCCAGGTGGCCAAGCTGGGCCATGGCCTTCT
CTCCGGGGAGTATTCCAAGCCAGTACCAGAGTCGGGCGATGGGGAGCGGGTGCCAGAACAGAAG
GAAGTTCAAGATGGCATTGCCCCTCGGATGTTCAAGGCCCTCATCGGCAAGGGCCACCCTGAAT
TCTCCACCAACCGGCAGCAGGATGCCCAGGAGTTCTTCCTTCACCTTATCAACATGGTGGAGAG
GAATTGCCGGAGCTCTGAAAATCCTAATGAAGTGTTCCGCTTCTTGGTGGAGGAAAAGATCAAG
TGCCTGGCCACAGAGAAGGTGAAGTACACCCAGCGAGTTGACTACATCATGCAGCTGCCTGTGC
CCATGGATGCAGCCCTTAACAAAGAGGAGCTTCTGGAGTACGAGGAGAAGAAGCGGCAAGCCGA
AGAGGAGAAGATGGCACTGCCAGAACTGGTTCGGGCCCAGGTGCCCTTCAGCTCTTGCCTGGAG
GCCTACGGGGCCCCTGAGCAGGTCGATGACTTCTGGAGCACGGCCCTGCAGGCCAAGTCAGTAG
CTGTCAAGACCACACGATTTGCCTCATTCCCTGACTACCTGGTCATCCAGATCAAGAAGTTCAC
CTTCGGCTTAGACTGGGTGCCCAAGAAACTGGATGTGTCCATCGAGATGCCAGAGGAGCTCGAC
ATCTCCCAGTTGAGGGGCACAGGGCTGCAGCCCGGAGAGGAGGAGCTGCCAGACATTGCCCCAC
CCCTGGTCACTCCGGATGAGCCCAAAGCGCCCATGCTGGATGAATCAGTCATCATCCAGCTGGT
GGAGATGGGCTTCCCTATGGATGCCTGCCGCAAAGCTGTCTACTACACGGGCAACAGCGGGGCT
GAGGCTGCCATGAACTGGGTCATGTCACACATGGATGATCCAGATTTTGCAAACCCCCTCATCC
TGCCTGGCTCTAGTGGGCCGGGCTCCACAAGCGCAGCAGCCGACCCCCCTCCCGAGGACTGTGT
GACCACCATTGTCTCCATGGGCTTCTCCCGGGACCAGGCCTTGAAAGCGCTGCGGGCCACGAAC
AATAGTTTAGAACGGGCTGTGGACTGGATCTTCAGTCACATTGACGACCTGGACGCTGAAGCTG
CCATGGACATCTCAGAGGGCCGCTCAGCTGCCGACTCCATCTCTGAGTCTGTGCCAGTGGGACC
TAAAGTCCGGGATGGTCCTGGAAAGTATCAGCTCTTTGCCTTCATTAGTCACATGGGCACCTCT
ACCATGTGTGGTCACTACGTCTGCCACATCAAGAAGGAAGGCAGATGGGTGATCTACAATGACC
AGAAAGTGTGTGCCTCCGAGAAGCCGCCCAAGGACCTGGGCTACATCTACTTCTACCAGAGAGT
GGCCAGCTAAGAGCCTGCCTCACCCCTTACCAATGAGGGCAGGGGAAGACCACCTGGCATGAGG
GAGAGGGGCTGAGGGATGGACTTCAGCCCCTCTGCTCTGTACCCTTTTTCCTTTTGTCCCACGG
CAGCAGGGAAGAAGCTGGAGGCCGTGGGAGAATGGCTGGGCAGAGCAGAGGGGCAGCGATAGAC
TCTGGGGATGGAGCAGGACGGGGACGGGAGGGGCCGGCCACCTGTCTGTAAGGAGACTTTGTTG
CTTCCCCTGCCCCCGGAATCCACAGTGCTCTGCTTCTCTGTGTCGCCCCGCCCAGCCCCCTGGT
GTGGAGGGAGGGGTCTCGTTTGTGCGCGTGGGTGTAGCTTTGTGCATCCTCTCCCAGTGGAGCA
ATCACCTGTGCCTCCCCTCCCCCTTTGTTTGCCCCTGTGTGGTTGGTCAAGGAGGGATGTGAGG
GAAATAGGGACCCCCCCCCCTTGCCCTCCTGCCTCAGTCTTTCCCCCACCCTGTCTCTTCCTTG
TCCTTCTCTGGAAAATGCCAAAATACACGATGTGAATAAAAGTACAACGGCTAAA

hide sequence

RefSeq Acc Id:

XM_003820275 ⟹ XP_003820323

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	12,415,301 - 12,429,794 (+)	NCBI
NHGRI_mPanPan1	12	12,412,059 - 12,426,552 (+)	NCBI
Mhudiblu_PPA_v0	12	6,983,941 - 6,998,469 (+)	NCBI
PanPan1.1	12	6,895,416 - 6,909,936 (+)	NCBI

Sequence:

show sequence

GGCAGGGGAGGGGACTGGGAACGGTGGGAGCCGCCGTGTGTGGAGAAGCTGCTGCCGGTGTCAT
GGCGGAGCTGAGTGAGGAGGCGCTGCTGTCAGTATTACCGACGATCCGGGTCCCTAAGGCTGGA
GACCGGGTCCACAAAGACGAGTGCGCCTTCTCCTTCGACACGCCGGAGTCTGAGGGGGGCCTCT
ACATCTGTATGAACACGTTTCTGGGCTTCGGGAAACAGTATGTGGAGAGACATTTCAATAAGAC
CGGCCAGCGAGTCTACTTGCACCTCCGGCGGACCCGGCGCCCGAAAGAGGAGGACCCTGCTACA
GGCACTGGAGACCCACCCCGGAAGAAGCCCACGCGGCTGGCTATTGGTGTTGAAGGCGGGTTTG
ACCTTAGCGAGGAGAAGTTTGAATTAGACGAGGATGTGAAGATTGTCATTTTGCCAGATTACCT
GGAGATTGCCCGGGATGGACTCGGGGGACTGCCTGACATTGTCAGAGATCGGGTGACCAGTGCA
GTGGAGGCCCTACTGTCGGCCGACTCAGCCTCCCGCAAGCAGGAGGTGCAGGCATGGGATGGGG
AAGTACGGCAGGTGTCTAAGCATGCCTTCAGCCTCAAGCAGTTGGACAACCCTGCTCGAATCCC
TCCCTGTGGCTGGAAGTGCTCCAAGTGTGACATGAGAGAGAACCTGTGGCTCAACCTGACTGAT
GGCTCCATCCTCTGTGGGCGACGCTACTTCGACGGCAGTGGGGGCAACAACCACGCTGTGGAGC
ACTACCGAGAGACAGGCTACCCGTTAGCTGTCAAGCTGGGCACCATCACCCCTGATGGAGCTGA
CGTGTACTCATATGATGAGGATGACATGGTCCTGGACCCCAGCCTGGCTGAGCACCTGTCCCAC
TTCGGCATCGACATGCTGAAGATGCAGAAGACAGACAAGACGATGACTGAGTTGGAGATAGACA
TGAACCAGCGGATTGGTGAATGGGAGCTGATCCAGGAGTCGGGTGTGCCACTCAAGCCCCTGTT
TGGGCCTGGCTACACAGGCATCCGGAACCTGGGTAACAGCTGCTACCTCAACTCTGTGGTCCAG
GTGCTCTTCAGCATCCCTGACTTCCAGAGGAAGTATGTGGATAAGCTGGAGAAGATCTTCCAGA
ATGCCCCGACGGACCCTACCCAGGATTTCAGCACCCAGGTGGCCAAGCTGGGCCATGGCCTTCT
CTCCGGGGAGTATTCCAAGCCAGTACCAGAGTCGGGCGATGGGGAGCGGGTGCCAGAACAGAAG
GAAGTTCAAGATGGCATTGCCCCTCGGATGTTCAAGGCCCTCATCGGCAAGGGCCACCCTGAAT
TCTCCACCAACCGGCAGCAGGATGCCCAGGAGTTCTTCCTTCACCTTATCAACATGGTGGAGAG
GAATTGCCGGAGCTCTGAAAATCCTAATGAAGTGTTCCGCTTCTTGGTGGAGGAAAAGATCAAG
TGCCTGGCCACAGAGAAGGTGAAGTACACCCAGCGAGTTGACTACATCATGCAGCTGCCTGTGC
CCATGGATGCAGCCCTTAACAAAGAGGAGCTTCTGGAGTACGAGGAGAAGAAGCGGCAAGCCGA
AGAGGAGAAGATGGCACTGCCAGAACTGGTTCGGGCCCAGGTGCCCTTCAGCTCTTGCCTGGAG
GCCTACGGGGCCCCTGAGCAGGTCGATGACTTCTGGAGCACGGCCCTGCAGGCCAAGTCAGTAG
CTGTCAAGACCACACGATTTGCCTCATTCCCTGACTACCTGGTCATCCAGATCAAGAAGTTCAC
CTTCGGCTTAGACTGGGTGCCCAAGAAACTGGATGTGTCCATCGAGATGCCAGAGGAGCTCGAC
ATCTCCCAGTTGAGGGGCACAGGGCTGCAGCCCGGAGAGGAGGAGCTGCCAGACATTGCCCCAC
CCCTGGTCACTCCGGATGAGCCCAAAGGTAGCCTTGGTTTCTATGGCAACGAAGACGAAGACTC
CTTCTGCTCCCCTCACTTCTCCTCTCCGACATCGCCCATGCTGGATGAATCAGTCATCATCCAG
CTGGTGGAGATGGGCTTCCCTATGGATGCCTGCCGCAAAGCTGTCTACTACACGGGCAACAGCG
GGGCTGAGGCTGCCATGAACTGGGTCATGTCACACATGGATGATCCAGATTTTGCAAACCCCCT
CATCCTGCCTGGCTCTAGTGGGCCGGGCTCCACAAGCGCAGCAGCCGACCCCCCTCCCGAGGAC
TGTGTGACCACCATTGTCTCCATGGGCTTCTCCCGGGACCAGGCCTTGAAAGCGCTGCGGGCCA
CGAACAATAGTTTAGAACGGGCTGTGGACTGGATCTTCAGTCACATTGACGACCTGGACGCTGA
AGCTGCCATGGACATCTCAGAGGGCCGCTCAGCTGCCGACTCCATCTCTGAGTCTGTGCCAGTG
GGACCTAAAGTCCGGGATGGTCCTGGAAAGTATCAGCTCTTTGCCTTCATTAGTCACATGGGCA
CCTCTACCATGTGTGGTCACTACGTCTGCCACATCAAGAAGGAAGGCAGATGGGTGATCTACAA
TGACCAGAAAGTGTGTGCCTCCGAGAAGCCGCCCAAGGACCTGGGCTACATCTACTTCTACCAG
AGAGTGGCCAGCTAAGAGCCTGCCTCACCCCTTACCAATGAGGGCAGGGGAAGACCACCTGGCA
TGAGGGAGAGGGGCTGAGGGATGGACTTCAGCCCCTCTGCTCTGTACCCTTTTTCCTTTTGTCC
CACGGCAGCAGGGAAGAAGCTGGAGGCCGTGGGAGAATGGCTGGGCAGAGCAGAGGGGCAGCGA
TAGACTCTGGGGATGGAGCAGGACGGGGACGGGAGGGGCCGGCCACCTGTCTGTAAGGAGACTT
TGTTGCTTCCCCTGCCCCCGGAATCCACAGTGCTCTGCTTCTCTGTGTCGCCCCGCCCAGCCCC
CTGGTGTGGAGGGAGGGGTCTCGTTTGTGCGCGTGGGTGTAGCTTTGTGCATCCTCTCCCAGTG
GAGCAATCACCTGTGCCTCCCCTCCCCCTTTGTTTGCCCCTGTGTGGTTGGTCAAGGAGGGATG
TGAGGGAAATAGGGACCCCCCCCCCTTGCCCTCCTGCCTCAGTCTTTCCCCCACCCTGTCTCTT
CCTTGTCCTTCTCTGGAAAATGCCAAAATACACGATGTGAATAAAAGTACAACGGCTAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_003820322	(Get FASTA)	NCBI Sequence Viewer
	XP_003820323	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000029803
	ENSPPAP00000029803.1

RefSeq Acc Id:	XP_003820323 ⟸ XM_003820275
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9BK98 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNK TGQRVYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFDLSEEKFELDEDVKIVILPDY LEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFSLKQLDNPARI PPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGA DVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRIGEWELIQESGVPLKPL FGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGL LSGEYSKPVPESGDGERVPEQKEVQDGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVE RNCRSSENPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQA EEEKMALPELVRAQVPFSSCLEAYGAPEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKF TFGLDWVPKKLDVSIEMPEELDISQLRGTGLQPGEEELPDIAPPLVTPDEPKGSLGFYGNEDED SFCSPHFSSPTSPMLDESVIIQLVEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANP LILPGSSGPGSTSAAADPPPEDCVTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDA EAAMDISEGRSAADSISESVPVGPKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIY NDQKVCASEKPPKDLGYIYFYQRVAS hide sequence

RefSeq Acc Id:

XP_003820322 ⟸ XM_003820274

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAELSEEALLSVLPTIRVPKAGDRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQYVERHFNK
TGQRVYLHLRRTRRPKEEDPATGTGDPPRKKPTRLAIGVEGGFDLSEEKFELDEDVKIVILPDY
LEIARDGLGGLPDIVRDRVTSAVEALLSADSASRKQEVQAWDGEVRQVSKHAFSLKQLDNPARI
PPCGWKCSKCDMRENLWLNLTDGSILCGRRYFDGSGGNNHAVEHYRETGYPLAVKLGTITPDGA
DVYSYDEDDMVLDPSLAEHLSHFGIDMLKMQKTDKTMTELEIDMNQRIGEWELIQESGVPLKPL
FGPGYTGIRNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGL
LSGEYSKPVPESGDGERVPEQKEVQDGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVE
RNCRSSENPNEVFRFLVEEKIKCLATEKVKYTQRVDYIMQLPVPMDAALNKEELLEYEEKKRQA
EEEKMALPELVRAQVPFSSCLEAYGAPEQVDDFWSTALQAKSVAVKTTRFASFPDYLVIQIKKF
TFGLDWVPKKLDVSIEMPEELDISQLRGTGLQPGEEELPDIAPPLVTPDEPKAPMLDESVIIQL
VEMGFPMDACRKAVYYTGNSGAEAAMNWVMSHMDDPDFANPLILPGSSGPGSTSAAADPPPEDC
VTTIVSMGFSRDQALKALRATNNSLERAVDWIFSHIDDLDAEAAMDISEGRSAADSISESVPVG
PKVRDGPGKYQLFAFISHMGTSTMCGHYVCHIKKEGRWVIYNDQKVCASEKPPKDLGYIYFYQR
VAS

hide sequence

RefSeq Acc Id:

ENSPPAP00000029803 ⟸ ENSPPAT00000052654

Protein Domains

UBA UBP-type USP

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000037918	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000052654.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.40.10	UniProtKB/TrEMBL
	Cysteine proteinases	UniProtKB/TrEMBL
	DNA helicase RuvA subunit, C-terminal domain	UniProtKB/TrEMBL
InterPro	Papain-like_cys_pep_sf	UniProtKB/TrEMBL
	Peptidase_C19_UCH	UniProtKB/TrEMBL
	UBA	UniProtKB/TrEMBL
	UBA-like_sf	UniProtKB/TrEMBL
	Ubiquitinyl_hydrolase	UniProtKB/TrEMBL
	UBP13_Znf-UBP_var	UniProtKB/TrEMBL
	UBP5_UBA1	UniProtKB/TrEMBL
	USP_CS	UniProtKB/TrEMBL
	USP_dom	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
	Znf_UBP	UniProtKB/TrEMBL
NCBI Gene	USP5	ENTREZGENE
PANTHER	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	UniProtKB/TrEMBL
	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 14	UniProtKB/TrEMBL
Pfam	UBA	UniProtKB/TrEMBL
	UCH	UniProtKB/TrEMBL
	zf-UBP	UniProtKB/TrEMBL
	zf-UBP_var	UniProtKB/TrEMBL
PIRSF	UBP	UniProtKB/TrEMBL
PROSITE	UBA	UniProtKB/TrEMBL
	USP_1	UniProtKB/TrEMBL
	USP_2	UniProtKB/TrEMBL
	USP_3	UniProtKB/TrEMBL
	ZF_UBP	UniProtKB/TrEMBL
SMART	UBA	UniProtKB/TrEMBL
	ZnF_UBP	UniProtKB/TrEMBL
Superfamily-SCOP	RING/U-box	UniProtKB/TrEMBL
	SSF46934	UniProtKB/TrEMBL
	SSF54001	UniProtKB/TrEMBL
UniProt	A0A2R9BK98	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD