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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor inner segment
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Accession:GO:0001917 term browser browse the term
Definition:The inner segment of a vertebrate photoreceptor containing mitochondria, ribosomes and membranes where opsin molecules are assembled and passed to be part of the outer segment discs.


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photoreceptor inner segment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 10 58,599,690 58,631,194 RGD:1624291
G Arr3 arrestin 3 JBrowse link X 70,438,590 70,452,140 RGD:1624291
RGD:1600115
G Asrgl1 asparaginase and isoaspartyl peptidase 1 JBrowse link 1 225,309,737 225,329,743 RGD:1600115
RGD:1624291
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 JBrowse link 1 81,852,423 81,881,565 RGD:1600115
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 JBrowse link 10 56,205,622 56,211,879 RGD:1600115
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:1624291
G Ccdc66 coiled-coil domain containing 66 JBrowse link 16 3,107,119 3,139,188 RGD:1624291
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:1624291
G Cep250 centrosomal protein 250 JBrowse link 3 151,508,366 151,544,631 RGD:1624291
G Cerkl ceramide kinase-like JBrowse link 3 66,268,835 66,395,615 RGD:1624291
G Cib2 calcium and integrin binding family member 2 JBrowse link 8 59,123,078 59,139,946 RGD:1624291
RGD:1600115
G Crb1 crumbs cell polarity complex component 1 JBrowse link 13 56,270,519 56,462,893 RGD:13451131
G Crocc ciliary rootlet coiled-coil, rootletin JBrowse link 5 159,540,453 159,583,194 RGD:1624291
G Dnm1 dynamin 1 JBrowse link 3 11,338,081 11,382,043 RGD:1624291
G Dnm2 dynamin 2 JBrowse link 8 22,458,869 22,540,649 RGD:1624291
G Dnm3 dynamin 3 JBrowse link 13 79,906,711 80,379,967 RGD:1624291
G Dram2 DNA-damage regulated autophagy modulator 2 JBrowse link 2 209,160,901 209,189,641 RGD:1624291
RGD:1600115
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:1624291
G Fam161a FAM161 centrosomal protein A JBrowse link 14 107,785,029 107,803,765 RGD:1624291
G Gnat1 G protein subunit alpha transducin 1 JBrowse link 8 116,433,302 116,438,038 RGD:1599009
RGD:1624291
G Gnat2 G protein subunit alpha transducin 2 JBrowse link 2 210,880,754 210,890,765 RGD:2302146
RGD:13792537
RGD:1624291
G Gnb1 G protein subunit beta 1 JBrowse link 5 172,914,025 172,981,403 RGD:1599009
G Gnb5 G protein subunit beta 5 JBrowse link 8 82,248,951 82,286,493 RGD:1624291
G Gngt1 G protein subunit gamma transducin 1 JBrowse link 4 28,972,339 28,975,419 RGD:1599009
G Guca1a guanylate cyclase activator 1A JBrowse link 9 15,609,804 15,620,030 RGD:1599354
G Guca1b guanylate cyclase activator 1B JBrowse link 9 15,621,083 15,629,017 RGD:1599354
G Guk1 guanylate kinase 1 JBrowse link 10 45,535,617 45,552,455 RGD:1624291
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059381
G Inha inhibin subunit alpha JBrowse link 9 82,700,482 82,703,383 RGD:2290440
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:1624291
RGD:1600115
G MGC94199 similar to RIKEN cDNA 2610301B20; EST AI428449 JBrowse link 5
5
24,145,829
23,358,464
24,165,467
23,377,697
RGD:1600115
RGD:1624291
G Myo3a myosin IIIA JBrowse link 17 88,952,635 89,167,538 RGD:1624291
G Myo3b myosin IIIB JBrowse link 3 56,355,433 56,717,740 RGD:1624291
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:8553559
RGD:1600115
RGD:1624291
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:8554510
G Opn1sw opsin 1, short wave sensitive JBrowse link 4 56,653,840 56,656,980 RGD:1600115
G Pcare photoreceptor cilium actin regulator JBrowse link 6 23,337,507 23,346,232 RGD:1624291
RGD:13792537
G Pdc phosducin JBrowse link 13 67,545,430 67,558,600 RGD:1600115
G Pdzd7 PDZ domain containing 7 JBrowse link 1 264,776,393 264,796,206 RGD:13792537
G Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 JBrowse link 19 41,731,845 41,798,451 RGD:5131540
G Pkm pyruvate kinase M1/2 JBrowse link 8 64,480,963 64,502,957 RGD:1624291
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:1600115
G Rapgef4 Rap guanine nucleotide exchange factor 4 JBrowse link 3 58,632,338 58,925,127 RGD:2314691
G Rd3 retinal degeneration 3, GUCY2D regulator JBrowse link 13 110,739,645 110,749,167 RGD:1600115
RGD:1624291
G Rdh11 retinol dehydrogenase 11 JBrowse link 6 102,356,498 102,372,618 RGD:1624291
G Rdh12 retinol dehydrogenase 12 JBrowse link 6 102,392,828 102,405,750 RGD:1624291
G Reep6 receptor accessory protein 6 JBrowse link 7 12,240,059 12,246,814 RGD:1624291
RGD:1600115
G Rgs9 regulator of G-protein signaling 9 JBrowse link 10 97,509,971 97,582,188 RGD:1624291
G Rho rhodopsin JBrowse link 4 147,832,136 147,837,298 RGD:1624291
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:1624291
G Rs1 retinoschisin 1 JBrowse link X 35,749,957 35,777,243 RGD:1600115
G Sag S-antigen visual arrestin JBrowse link 9 94,926,901 94,972,162 RGD:6893629
RGD:13792537
RGD:1600115
RGD:1624291
G Shank2 SH3 and multiple ankyrin repeat domains 2 JBrowse link 1 217,149,156 217,593,950 RGD:1624291
RGD:1600115
G Snap25 synaptosome associated protein 25 JBrowse link 3 129,697,408 129,788,417 RGD:1600115
G Tulp1 TUB like protein 1 JBrowse link 20 7,931,673 7,943,601 RGD:1624291
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:1303964
RGD:13792537
RGD:1624291
G Ush1g USH1 protein network component sans JBrowse link 10 103,866,566 103,873,416 RGD:1624291
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:1600128
RGD:1624291
G Usp45 ubiquitin specific peptidase 45 JBrowse link 5 35,916,763 35,984,525 RGD:1624291
RGD:1600115
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:1600128
RGD:13792537
RGD:1600115
RGD:1624291
photoreceptor inner segment membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rho rhodopsin JBrowse link 4 147,832,136 147,837,298 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 19737
    cellular anatomical entity 19353
      photoreceptor inner segment 60
        photoreceptor inner segment membrane 1
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.