Rd3 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 13 | 106,060,657 - 106,097,063 (+) | NCBI | GRCr8 | GRCr8 | | GRCr8 | GRCr8 Ensembl | 13 | 106,084,171 - 106,093,540 (+) | Ensembl | | | | GRCr8 | mRatBN7.2 | 13 | 103,551,823 - 103,562,925 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 13 | 103,552,857 - 103,562,622 (+) | Ensembl | | | | mRatBN7.2 | Rnor_6.0 | 13 | 110,739,645 - 110,749,167 (+) | NCBI | Rnor_6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 13 | 110,743,098 - 110,748,365 (+) | Ensembl | | | rn6 | Rnor6.0 | Rnor_5.0 | 13 | 115,288,392 - 115,307,827 (+) | NCBI | Rnor_5.0 | Rnor_5.0 | rn5 | | Celera | 13 | 102,992,075 - 103,001,674 (+) | NCBI | | Celera | | | Cytogenetic Map | 13 | q27 | NCBI | | | | |
|
RD3 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 211,476,522 - 211,492,162 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 211,476,522 - 211,492,162 (-) | Ensembl | | | hg38 | GRCh38 | GRCh37 | 1 | 211,649,864 - 211,665,504 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 209,717,404 - 209,732,882 (-) | NCBI | Build 36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 184,876,748 - 184,893,143 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32.3 | NCBI | | | | | HuRef | 1 | 182,326,839 - 182,343,232 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 212,922,299 - 212,938,679 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 210,722,616 - 210,738,242 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Rd3 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 1 | 191,688,574 - 191,725,497 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 191,709,331 - 191,720,244 (+) | Ensembl | | GRCm39 Ensembl | | GRCm39 | GRCm38 | 1 | 191,956,490 - 191,988,282 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 191,977,370 - 191,988,283 (+) | Ensembl | | | mm10 | GRCm38 | MGSCv37 | 1 | 193,801,254 - 193,812,163 (+) | NCBI | MGSCv37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 193,678,006 - 193,686,169 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 198,918,619 - 198,929,618 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | H6 | NCBI | | | | | cM Map | 1 | 97.09 | NCBI | | | | |
|
Rd3 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955489 | 896,964 - 903,855 (+) | Ensembl | | | | | ChiLan1.0 | NW_004955489 | 896,964 - 903,855 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
RD3 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 37,922,047 - 37,927,041 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 37,887,182 - 37,892,169 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 187,044,054 - 187,060,441 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 191,907,989 - 191,924,365 (-) | NCBI | PanPan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 191,907,989 - 191,924,365 (-) | Ensembl | | | panPan2 | panpan1.1 |
|
RD3 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 7 | 9,876,003 - 9,887,267 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 9,451,711 - 9,465,821 (-) | NCBI | Dog10K_Boxer_Tasha | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 9,579,585 - 9,593,687 (-) | NCBI | ROS_Cfam_1.0 | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 9,579,448 - 9,582,414 (-) | Ensembl | | | | ROS_Cfam_1.0 Ensembl | UMICH_Zoey_3.1 | 7 | 9,502,556 - 9,516,383 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 9,603,610 - 9,618,587 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 9,728,937 - 9,742,788 (-) | NCBI | UU_Cfam_GSD_1.0 | UU_Cfam_GSD_1.0 | | |
|
Rd3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024409344 | 64,612,737 - 64,633,817 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936557 | 1,852,940 - 1,876,313 (+) | Ensembl | | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936557 | 1,852,996 - 1,873,070 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
RD3 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 9 | 131,705,229 - 131,719,288 (+) | Ensembl | | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 131,712,858 - 131,716,179 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 144,740,850 - 144,751,535 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
RD3 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 25 | 18,011,865 - 18,029,392 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 25 | 18,025,451 - 18,027,916 (+) | Ensembl | | ChlSab1.1 Ensembl | chlSab2 | Vervet-AGM | Vero_WHO_p1.0 | NW_023666055 | 18,550,003 - 18,554,269 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Rd3 (Heterocephalus glaber - naked mole-rat) |
|