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Pathways

MITOCHONDRIA DYNAMICS PATHWAY (PW:0001961)

View Ontology Report

Description

The double membrane-bound mitochondria organelles play essential roles in cellular homeostasis. In addition to the major function of ATP production in the oxidative phosphorylation (OXPHOS) pathway, mitochondria are the site of other important metabolic pathway such as fatty acid oxidation, citric acid cycle and urea cycle, heme and iron-sulfur cluster biosynthesis. They also provide for calcium storage and signaling, and have a central role in apoptosis. The mitochondrial distribution/mass var

Pathway Diagram:

Elsevier Inc. Trak/Milton ATP cardiolipin Opa1i Miro kinesin motor dynein motor Mff Dnm1l cardiolipin ---> phosphatidic acid Pld6 cardiolipin --+> Opa1i cardiolipin metabolic pathway Mfn1 ---- Mfn2 Stoml2 Miro ---- Trak/Milton Snph dynactin complex ---- dynein motor ATP hydrolysis --+> anterograde movement ATP hydrolysis --+> retrograde movement anterograde movement ATP hydrolysis retrograde movement kinesin motor ---> ATP hydrolysis dynein motor ---> ATP hydrolysis phosphatidic acid phosphatidic acid --+> mitochondria fusion pathway Dnm1l ---- Mff Dnm1l ---- Mief2 Dnm1l ---- Mief1 Mief2 Fis1 Gdap1 Mtfp1 Mief1 Opa1 Phb2 Sh3glb1 mitochondrial autophagy pathway ---| mitochondria fusion pathway mitochondrial autophagy pathway ---| mitochondria transport pathway mitochondria fusion pathway mitochondria fission pathway ATP ---- dynein motor ATP ---- kinesin motor kinesin motor ---- Trak/Milton dynein motor ---- Trak/Milton mitochondrial autophagy pathway mitochondria transport pathway other adaptors dynactin complex Mfn2 Mfn1
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Genes in Pathway:


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mitochondria dynamics pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pink1 PTEN induced kinase 1 IMP RGD PMID:21613270 RGD:12903967 NCBI chr 5:155,813,838...155,825,950
Ensembl chr 5:155,813,838...155,825,950
JBrowse link
mitochondria fission pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1l dynamin 1-like ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr11:98,084,049...98,135,663
Ensembl chr11:98,085,397...98,137,420
JBrowse link
G Fis1 fission, mitochondrial 1 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr12:25,345,239...25,360,135
Ensembl chr12:25,345,239...25,349,335
JBrowse link
G Gdap1 ganglioside-induced differentiation-associated-protein 1 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr 5:6,715,935...6,735,013
Ensembl chr 5:6,715,935...6,735,313
JBrowse link
G Mff mitochondrial fission factor ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr 9:91,455,931...91,484,171
Ensembl chr 9:91,455,871...91,484,171
JBrowse link
G Mief1 mitochondrial elongation factor 1 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr 7:113,666,918...113,679,550
Ensembl chr 7:113,666,901...113,683,977
JBrowse link
G Mief2 mitochondrial elongation factor 2 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr10:45,907,576...45,913,658
Ensembl chr10:45,908,706...45,913,658
JBrowse link
G Mtfp1 mitochondrial fission process 1 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr14:83,192,013...83,195,853
Ensembl chr14:83,192,021...83,195,927
JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr 2:236,411,194...236,445,225
Ensembl chr 2:236,410,436...236,445,140
JBrowse link
mitochondria fusion pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mfn1 mitofusin 1 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr 2:117,240,525...117,288,017
Ensembl chr 2:117,241,759...117,290,190
JBrowse link
G Mfn2 mitofusin 2 ISO RGD PMID:21683788 PMID:24442478 RGD:10402101, RGD:10402102 NCBI chr 5:163,587,463...163,617,363
Ensembl chr 5:163,587,463...163,618,495
JBrowse link
G Opa1 OPA1, mitochondrial dynamin like GTPase ISO
IMP
RGD PMID:21683788 PMID:21613270 PMID:24442478 RGD:10402101, RGD:12903967, RGD:10402102 NCBI chr11:84,612,943...84,690,025
Ensembl chr11:84,615,340...84,689,955
JBrowse link
G Phb2 prohibitin 2 ISO RGD PMID:21683788 RGD:10402101 NCBI chr 4:159,203,948...159,208,561
Ensembl chr 4:159,203,926...159,209,231
JBrowse link
G Pld6 phospholipase D family, member 6 ISO RGD PMID:21683788 RGD:10402101 NCBI chr10:45,078,081...45,080,732
Ensembl chr10:45,077,080...45,087,160
JBrowse link
G Stoml2 stomatin like 2 ISO RGD PMID:21683788 RGD:10402101 NCBI chr 5:62,052,042...62,055,639
Ensembl chr 5:62,052,045...62,055,670
JBrowse link
mitochondria transport pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta ISO RGD PMID:15473859 RGD:10402155 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:16,776,661...16,780,242
JBrowse link
G Actr10 actin related protein 10 ISO RGD PMID:15473859 RGD:10402155 NCBI chr 6:95,182,082...95,208,325
Ensembl chr 6:95,182,111...95,209,021
JBrowse link
G Actr1a actin related protein 1A ISO RGD PMID:15473859 RGD:10402155 NCBI chr 1:255,179,241...255,199,009
Ensembl chr 1:255,179,242...255,199,459
JBrowse link
G Capza1 capping actin protein of muscle Z-line subunit alpha 1 ISO RGD PMID:15473859 RGD:10402155 NCBI chr 2:195,008,035...195,053,100
Ensembl chr 2:195,008,039...195,053,100
JBrowse link
G Dctn1 dynactin subunit 1 ISO RGD PMID:25612908 PMID:15473859 RGD:10402141, RGD:10402155 NCBI chr 4:117,228,722...117,261,528
Ensembl chr 4:117,219,349...117,261,528
JBrowse link
G Dctn2 dynactin subunit 2 ISO RGD PMID:15473859 RGD:10402155 NCBI chr 7:64,977,338...64,992,875
Ensembl chr 7:64,977,363...64,992,873
JBrowse link
G Dctn3 dynactin subunit 3 ISO RGD PMID:15473859 RGD:10402155 NCBI chr 5:61,676,950...61,684,958
Ensembl chr 5:61,676,950...61,684,903
JBrowse link
G Dctn4 dynactin subunit 4 ISO RGD PMID:15473859 RGD:10402155 NCBI chr18:56,251,187...56,279,844
Ensembl chr18:56,252,780...56,279,842
JBrowse link
G Dctn5 dynactin subunit 5 ISO RGD PMID:15473859 RGD:10402155 NCBI chr 1:186,120,415...186,137,146
Ensembl chr 1:186,119,913...186,137,146
JBrowse link
G Dctn6 dynactin subunit 6 ISO RGD PMID:15473859 RGD:10402155 NCBI chr16:64,780,759...64,799,766
Ensembl chr16:64,780,735...64,801,060
JBrowse link
G Dync1h1 dynein cytoplasmic 1 heavy chain 1 ISO RGD PMID:25612908 PMID:21936784 RGD:10402141, RGD:10402142 NCBI chr 6:135,436,375...135,502,117
Ensembl chr 6:135,430,750...135,502,116
JBrowse link
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ISO RGD PMID:21936784 RGD:10402142 NCBI chr 4:34,819,313...35,132,647
Ensembl chr 4:34,819,430...35,142,319
JBrowse link
G Dync1i2 dynein cytoplasmic 1 intermediate chain 2 ISO RGD PMID:21936784 RGD:10402142 NCBI chr 3:76,441,621...76,492,782
Ensembl chr 3:76,424,469...76,492,782
JBrowse link
G Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ISO RGD PMID:21936784 RGD:10402142 NCBI chr 8:123,254,823...123,288,496
Ensembl chr 8:123,254,859...123,289,167
JBrowse link
G Dync1li2 dynein, cytoplasmic 1 light intermediate chain 2 ISO RGD PMID:21936784 RGD:10402142 NCBI chr19:538,207...561,110
Ensembl chr19:538,211...561,107
JBrowse link
G Dynll1 dynein light chain LC8-type 1 ISO RGD PMID:21936784 RGD:10402142 NCBI chr12:46,945,291...46,976,867
Ensembl chr12:46,973,050...46,976,861
JBrowse link
G Dynll2 dynein light chain LC8-type 2 ISO RGD PMID:21936784 RGD:10402142 NCBI chr10:73,264,260...73,283,042
Ensembl chr10:73,264,261...73,272,285
JBrowse link
G Dynlrb1 dynein light chain roadblock-type 1 ISO RGD PMID:21936784 RGD:10402142 NCBI chr 3:164,197,892...164,224,409
Ensembl chr 3:164,202,953...164,224,409
JBrowse link
G Dynlrb2 dynein light chain roadblock-type 2 ISO RGD PMID:21936784 RGD:10402142 NCBI chr19:61,428,782...61,440,331
Ensembl chr19:61,429,065...61,441,071
JBrowse link
G Dynlt1 dynein light chain Tctex-type 1 ISO RGD PMID:21936784 RGD:10402142 NCBI chr 1:49,292,093...49,299,051
Ensembl chr 1:49,282,243...49,298,951
JBrowse link
G Dynlt3 dynein light chain Tctex-type 3 ISO RGD PMID:21936784 RGD:10402142 NCBI chr  X:16,000,425...16,009,632
Ensembl chr  X:16,000,395...16,009,627
JBrowse link
G Fez1 fasciculation and elongation protein zeta 1 ISO RGD PMID:25612908 RGD:10402141 NCBI chr 8:44,733,288...44,778,519
Ensembl chr 8:44,733,300...44,784,097
JBrowse link
G Kif1b kinesin family member 1B ISO RGD PMID:25612908 RGD:10402141 NCBI chr 5:164,890,778...165,025,848
Ensembl chr 5:164,894,763...165,008,841
JBrowse link
G Kif5a kinesin family member 5A ISO RGD PMID:25612908 RGD:10402141 NCBI chr 7:64,937,210...64,974,339
Ensembl chr 7:64,934,740...64,978,272
JBrowse link
G Kif5b kinesin family member 5B ISO RGD PMID:25612908 RGD:10402141 NCBI chr17:56,185,386...56,222,990
Ensembl chr17:56,185,380...56,223,008
JBrowse link
G Kif5c kinesin family member 5C ISO RGD PMID:25612908 RGD:10402141 NCBI chr 3:54,441,266...54,591,630
Ensembl chr 3:54,441,310...54,594,813
JBrowse link
G Ranbp2 RAN binding protein 2 ISO RGD PMID:25612908 RGD:10402141 NCBI chr20:26,984,520...27,036,573
Ensembl chr20:26,985,275...27,036,571
JBrowse link
G Rhot1 ras homolog family member T1 ISO RGD PMID:25612908 RGD:10402141 NCBI chr10:65,685,687...65,760,682
Ensembl chr10:65,696,571...65,760,681
JBrowse link
G Rhot2 ras homolog family member T2 ISO RGD PMID:25612908 RGD:10402141 NCBI chr10:15,363,467...15,369,263
Ensembl chr10:15,361,726...15,369,006
JBrowse link
G Snph syntaphilin ISO RGD PMID:25612908 RGD:10402141 NCBI chr 3:160,558,929...160,603,636
Ensembl chr 3:160,560,097...160,599,728
JBrowse link
G Sybu syntabulin ISO RGD PMID:25612908 RGD:10402141 NCBI chr 7:77,731,662...77,833,413
Ensembl chr 7:77,731,605...77,833,686
JBrowse link
G Trak1 trafficking kinesin protein 1 ISO RGD PMID:25612908 RGD:10402141 NCBI chr 8:129,861,967...130,016,870
Ensembl chr 8:129,861,977...130,016,870
JBrowse link
G Trak2 trafficking kinesin protein 2 ISO RGD PMID:25612908 RGD:10402141 NCBI chr 9:67,842,680...67,909,786
Ensembl chr 9:67,842,683...67,908,158
JBrowse link

Pathway Gene Annotations

Disease Annotations Associated with Genes in the mitochondria dynamics pathway
Pathway Annotations Associated with Genes in the mitochondria dynamics pathway
Phenotype Annotations Associated with Genes in the mitochondria dynamics pathway

References Associated with the mitochondria dynamics pathway:

Ontology Path Diagram:

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Import into Pathway Studio: