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Gene: Snph (syntaphilin) Rattus norvegicus
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Symbol: Snph
Name: syntaphilin
Description: Predicted to have syntaxin-1 binding activity. Involved in brain development and neuron differentiation. Localizes to several cellular components, including the mitochondrial membrane; neuronal cell body; and presynaptic membrane. Orthologous to human SNPH (syntaphilin); PARTICIPATES IN mitochondria transport pathway; INTERACTS WITH bisphenol A; Brodifacoum; cocaine.
Type: protein-coding
RefSeq Status: VALIDATED
Orthologs:
Homo sapiens (human) : SNPH (syntaphilin)  HGNC  Alliance
Mus musculus (house mouse) : Snph (syntaphilin)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Snph (syntaphilin)
Pan paniscus (bonobo/pygmy chimpanzee) : SNPH (syntaphilin)
Canis lupus familiaris (dog) : SNPH (syntaphilin)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Snph (syntaphilin)
Sus scrofa (pig) : SNPH (syntaphilin)
more info ...
Allele / Splice: SnphTn(sb-T2/Bart3)2.214Mcwi  
Genetic Models: F344-SnphTn(sb-T2/Bart3)2.214Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.03147,102,394 - 147,143,576 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.03153,455,882 - 153,496,985 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43141,921,547 - 141,961,697 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13141,828,784 - 141,869,404 (-)NCBI
Celera3138,857,941 - 138,897,949 (-)NCBICelera
Cytogenetic Map3q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Snph
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1305867
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.