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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal heart right atrium morphology
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Accession:MP:0003922 term browser browse the term
Definition:any structural anomaly of the right upper chamber of the heart
Synonyms:exact_synonym: abnormal right atrium morphology
 xref: Fyler:1770


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abnormal heart right atrium morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4933434E20Rik RIKEN cDNA 4933434E20 gene IEA MGI NCBI chr 3:89,958,941...89,969,754
Ensembl chr 3:89,958,943...89,970,648
Ensembl chr 3:89,958,943...89,970,648 		JBrowse link
G Adgrl2 adhesion G protein-coupled receptor L2 IAGP MGI PMID:31206334 NCBI chr 3:148,521,491...149,150,832
Ensembl chr 3:148,521,219...148,696,191 		JBrowse link
G Klf3 Kruppel-like transcription factor 3 (basic) IAGP MGI PMID:23874215 NCBI chr 5:64,960,864...64,990,246
Ensembl chr 5:64,960,731...64,990,244 		JBrowse link
abnormal atrioventricular bundle morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 IAGP MGI PMID:34459252 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356 		JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 IAGP MGI PMID:34459252 NCBI chr  X:37,488,524...37,545,337
Ensembl chr  X:37,490,234...37,545,331 		JBrowse link
G Myl2 myosin, light polypeptide 2, regulatory, cardiac, slow IAGP MGI PMID:15109497 NCBI chr 5:122,230,787...122,251,536
Ensembl chr 5:122,239,014...122,251,535 		JBrowse link
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:15109497 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Tbx5 T-box 5 IAGP MGI PMID:15289437 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
G Xirp2 xin actin-binding repeat containing 2 IAGP MGI PMID:29306897 NCBI chr 2:67,276,343...67,356,964
Ensembl chr 2:67,004,178...67,356,959 		JBrowse link
abnormal atrioventricular node morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A1cf APOBEC1 complementation factor IAGP MGI PMID:18794341 NCBI chr19:31,846,156...31,929,765
Ensembl chr19:31,846,164...31,926,395 		JBrowse link
G Cxadr coxsackie virus and adenovirus receptor IAGP MGI PMID:18794341 NCBI chr16:78,098,114...78,156,673
Ensembl chr16:78,098,377...78,156,662 		JBrowse link
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 IAGP MGI PMID:34459252 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356 		JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 IAGP MGI PMID:34459252 NCBI chr  X:37,488,524...37,545,337
Ensembl chr  X:37,490,234...37,545,331 		JBrowse link
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:15085192 PMID:26226998 PMID:28352650 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
abnormal inferior vena cava valve morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 4933434E20Rik RIKEN cDNA 4933434E20 gene IEA MGI NCBI chr 3:89,958,941...89,969,754
Ensembl chr 3:89,958,943...89,970,648
Ensembl chr 3:89,958,943...89,970,648 		JBrowse link
G Atg16l1 autophagy related 16 like 1 IEA MGI NCBI chr 1:87,683,730...87,720,150
Ensembl chr 1:87,683,592...87,720,150 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 IEA MGI NCBI chr18:74,416,171...74,493,055
Ensembl chr18:74,416,161...74,493,057 		JBrowse link
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658 		JBrowse link
G Coro1c coronin, actin binding protein 1C IEA MGI NCBI chr 5:113,980,500...114,046,767
Ensembl chr 5:113,980,497...114,046,819 		JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 IEA MGI NCBI chr11:46,084,676...46,203,686
Ensembl chr11:46,084,677...46,203,686 		JBrowse link
G H13 histocompatibility 13 IEA MGI NCBI chr 2:152,511,292...152,550,590
Ensembl chr 2:152,511,381...152,550,590 		JBrowse link
G Prmt7 protein arginine N-methyltransferase 7 IEA MGI NCBI chr 8:106,937,686...106,978,326
Ensembl chr 8:106,937,568...106,979,426 		JBrowse link
G Pth1r parathyroid hormone 1 receptor IEA MGI NCBI chr 9:110,551,132...110,576,213
Ensembl chr 9:110,551,153...110,576,213 		JBrowse link
G Rpgrip1l Rpgrip1-like IEA MGI NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor IEA MGI NCBI chr 7:24,099,106...24,122,197
Ensembl chr 7:24,099,044...24,122,203 		JBrowse link
G Ssr2 signal sequence receptor, beta IEA MGI NCBI chr 3:88,486,915...88,495,727
Ensembl chr 3:88,483,183...88,495,726 		JBrowse link
G Trappc9 trafficking protein particle complex 9 IEA MGI NCBI chr15:72,461,469...72,933,086
Ensembl chr15:72,461,469...72,933,053 		JBrowse link
G Xpnpep1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble IEA MGI NCBI chr19:52,919,710...53,027,093
Ensembl chr19:52,920,357...53,028,645 		JBrowse link
abnormal left posterior bundle morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:26226998 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Tbx5 T-box 5 IAGP MGI PMID:15289437 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
abnormal right bundle morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx5 T-box 5 IAGP MGI PMID:15289437 NCBI chr 5:119,934,581...120,023,285
Ensembl chr 5:119,970,733...120,023,284 		JBrowse link
abnormal sinoatrial node morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bves blood vessel epicardial substance IAGP MGI PMID:22354168 NCBI chr10:45,211,783...45,248,580
Ensembl chr10:45,211,868...45,248,575 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:21193513 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hcn4 hyperpolarization-activated, cyclic nucleotide-gated K+ 4 IAGP MGI PMID:21193513 NCBI chr 9:58,730,232...58,770,458
Ensembl chr 9:58,730,695...58,770,458 		JBrowse link
G Popdc2 popeye domain containing 2 IAGP MGI PMID:22354168 NCBI chr16:38,182,523...38,198,578
Ensembl chr16:38,182,571...38,198,578 		JBrowse link
G Prkag2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit IAGP MGI PMID:29097735 NCBI chr 5:25,067,733...25,311,576
Ensembl chr 5:25,067,742...25,305,640 		JBrowse link
G Tbx3 T-box 3 IAGP MGI PMID:17473172 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
absent atrioventricular node term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:15085192 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
atrioventricular node hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myl2 myosin, light polypeptide 2, regulatory, cardiac, slow IAGP MGI PMID:15109497 NCBI chr 5:122,230,787...122,251,536
Ensembl chr 5:122,239,014...122,251,535 		JBrowse link
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:15109497 PMID:28352650 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
decreased sinoatrial node size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx3 T-box 3 IAGP MGI PMID:17473172 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
dilated heart right atrium term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cap2 cyclase associated actin cytoskeleton regulatory protein 2 IAGP MGI PMID:22945801 NCBI chr13:46,655,379...46,803,757
Ensembl chr13:46,655,324...46,803,757 		JBrowse link
G Casz1 castor zinc finger 1 IAGP MGI PMID:25953344 NCBI chr 4:148,888,823...149,039,350
Ensembl chr 4:148,888,886...149,039,346 		JBrowse link
G Crkl v-crk avian sarcoma virus CT10 oncogene homolog-like IAGP MGI PMID:11242111 NCBI chr16:17,269,849...17,305,304
Ensembl chr16:17,269,851...17,305,298 		JBrowse link
G Gata4 GATA binding protein 4 IAGP MGI PMID:15464586 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 IAGP MGI PMID:8917529 NCBI chr19:4,336,029...4,356,356
Ensembl chr19:4,336,029...4,356,250 		JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 IAGP MGI PMID:10807864 NCBI chr13:44,881,817...45,075,119
Ensembl chr13:44,882,950...45,075,119 		JBrowse link
G Myh10 myosin, heavy polypeptide 10, non-muscle IAGP MGI PMID:9356462 NCBI chr11:68,581,228...68,707,451
Ensembl chr11:68,582,385...68,707,458 		JBrowse link
G Myo18b myosin XVIIIb IAGP MGI PMID:18761673 NCBI chr 5:112,836,742...113,044,311
Ensembl chr 5:112,836,742...113,044,228 		JBrowse link
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:25953344 PMID:28352650 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Rxra retinoid X receptor alpha IAGP MGI PMID:7926783 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969 		JBrowse link
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A IAGP MGI PMID:8849723 NCBI chr 5:13,174,789...13,653,453
Ensembl chr 5:13,175,381...13,652,533 		JBrowse link
G Speg SPEG complex locus IAGP MGI PMID:19118250 NCBI chr 1:75,351,931...75,408,964
Ensembl chr 1:75,351,941...75,408,964 		JBrowse link
G Srsf10 serine and arginine-rich splicing factor 10 IAGP MGI PMID:19386262 NCBI chr 4:135,582,454...135,597,219
Ensembl chr 4:135,583,058...135,597,219 		JBrowse link
increased heart right atrium size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carm1 coactivator-associated arginine methyltransferase 1 IAGP MGI PMID:35736367 NCBI chr 9:21,458,163...21,500,763
Ensembl chr 9:21,458,190...21,503,919 		JBrowse link
G Casz1 castor zinc finger 1 IAGP MGI PMID:25953344 NCBI chr 4:148,888,823...149,039,350
Ensembl chr 4:148,888,886...149,039,346 		JBrowse link
G Gata5 GATA binding protein 5 IAGP MGI PMID:21633169 NCBI chr 2:179,966,881...179,977,296
Ensembl chr 2:179,966,926...179,976,492 		JBrowse link
G Hif3a hypoxia inducible factor 3, alpha subunit IAGP MGI PMID:18070924 NCBI chr 7:16,764,918...16,796,352
Ensembl chr 7:16,765,432...16,796,352 		JBrowse link
G Irx4 Iroquois homeobox 4 IAGP MGI PMID:11238910 NCBI chr13:73,407,708...73,417,741
Ensembl chr13:73,408,598...73,417,727 		JBrowse link
G Jag1 jagged 1 IAGP MGI PMID:23095891 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Jup junction plakoglobin IAGP MGI PMID:21880664 NCBI chr11:100,259,682...100,288,639
Ensembl chr11:100,259,784...100,288,589 		JBrowse link
G Klf3 Kruppel-like transcription factor 3 (basic) IAGP MGI PMID:23874215 NCBI chr 5:64,960,864...64,990,246
Ensembl chr 5:64,960,731...64,990,244 		JBrowse link
G Nkx2-5 NK2 homeobox 5 IAGP MGI PMID:25953344 NCBI chr17:27,057,638...27,063,962
Ensembl chr17:27,057,638...27,063,983 		JBrowse link
G Pikfyve phosphoinositide kinase, FYVE type zinc finger containing IAGP MGI PMID:23047693 NCBI chr 1:65,225,796...65,317,855
Ensembl chr 1:65,225,842...65,317,854 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 IAGP MGI PMID:25190059 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Raf1 v-raf-leukemia viral oncogene 1 IAGP MGI PMID:21339642 NCBI chr 6:115,595,530...115,653,596
Ensembl chr 6:115,595,028...115,653,596 		JBrowse link
G Sema3d sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D IAGP MGI PMID:23685842 NCBI chr 5:12,433,133...12,638,920
Ensembl chr 5:12,433,352...12,638,915 		JBrowse link
G Tcf21 transcription factor 21 IAGP MGI PMID:22573622 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
increased heart right atrium weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irx4 Iroquois homeobox 4 IAGP MGI PMID:11238910 NCBI chr13:73,407,708...73,417,741
Ensembl chr13:73,408,598...73,417,727 		JBrowse link
increased sinoatrial node size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mef2c myocyte enhancer factor 2C IAGP MGI PMID:16106363 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
sinoatrial node hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shox2 SHOX homeobox 2 IAGP MGI PMID:23620086 NCBI chr 3:66,879,056...66,889,104
Ensembl chr 3:66,879,060...66,889,104 		JBrowse link
G Tbx3 T-box 3 IAGP MGI PMID:22203979 NCBI chr 5:119,808,600...119,822,789
Ensembl chr 5:119,808,734...119,822,789 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16756
    cardiovascular system phenotype 4132
      abnormal cardiovascular system morphology 3255
        abnormal heart morphology 2409
          abnormal heart atrium morphology 319
            abnormal heart right atrium morphology 55
              abnormal atrioventricular bundle morphology + 6
              abnormal atrioventricular node morphology + 6
              abnormal coronary sinus valve morphology 0
              abnormal crista terminalis morphology 0
              abnormal heart right atrium auricular region morphology 0
              abnormal heart right atrium weight + 1
              abnormal inferior vena cava valve morphology + 14
              abnormal sinoatrial node morphology + 8
              abnormal vena cava sinus morphology 0
              cor triatriatum dextrum 0
              decreased heart right atrium size + 0
              dilated heart right atrium 13
              increased heart right atrium size + 14
paths to the root