Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:dosage compensation by inactivation of X chromosome
go back to main search page
Accession:GO:0009048 term browser browse the term
Definition:Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by heterochromatin formation leading to a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex.
Synonyms:exact_synonym: X chromosome inactivation
 broad_synonym: chromosome inactivation
 related_synonym: Barr body formation
 xref: Wikipedia:X-inactivation
 only_in_taxon: NCBITaxon:32524 ! Amniota
 never_in_taxon: NCBITaxon:8782 ! Aves

Please select species to view GViewer data.

show annotations for term's descendants           Sort by:
dosage compensation by inactivation of X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Brca1 BRCA1 DNA repair associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964 		JBrowse link
G G BRCA1 BRCA1 DNA repair associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr16:63,162,827...63,243,928 JBrowse link
G P BRCA1 BRCA1 DNA repair associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668 		JBrowse link
G S Brca1 BRCA1 DNA repair associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G D BRCA1 BRCA1 DNA repair associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G B BRCA1 BRCA1 DNA repair associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G H BRCA1 BRCA1 DNA repair associated involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G N Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:4831049|PMID:20833368) UniProt PMID:20833368 MGI:4831049 NCBI chrNW_004624771:14,756,088...14,766,106
Ensembl chrNW_004624771:14,756,100...14,765,832 		JBrowse link
G G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:81,879,532...81,890,684
Ensembl chr25:81,878,111...81,890,701 		JBrowse link
G P HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,477,902...17,497,030 		JBrowse link
G S Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:6,014,745...6,022,213 JBrowse link
G D HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754 		JBrowse link
G B HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031 		JBrowse link
G C Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:4831049|PMID:20833368) UniProt PMID:20833368 MGI:4831049 NCBI chrNW_004955406:8,000,269...8,021,554
Ensembl chrNW_004955406:8,000,269...8,021,554 		JBrowse link
G R Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in ISO (MGI:4831049|PMID:20833368) RGD PMID:20833368 MGI:4831049 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588 		JBrowse link
G M Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IMP (MGI:4831049|PMID:20833368) UniProt PMID:20833368 MGI:4831049 NCBI chr 1:178,148,673...178,170,063
Ensembl chr 1:178,148,673...178,165,362 		JBrowse link
G H HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560 		JBrowse link
G N Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISO (PMID:23542155) UniProt PMID:23542155 NCBI chrNW_004624772:6,713,224...6,733,841
Ensembl chrNW_004624772:6,713,055...6,733,608 		JBrowse link
G G LRIF1 ligand dependent nuclear receptor interacting factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:22,598,160...22,614,752
Ensembl chr20:22,598,124...22,617,024 		JBrowse link
G P LRIF1 ligand dependent nuclear receptor interacting factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:109,271,562...109,292,313
Ensembl chr 4:109,271,728...109,292,310 		JBrowse link
G S Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:2,313,923...2,334,839
Ensembl chrNW_004936704:2,319,145...2,333,400 		JBrowse link
G D LRIF1 ligand dependent nuclear receptor interacting factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,023,383...41,041,776
Ensembl chr 6:41,023,787...41,039,844 		JBrowse link
G B LRIF1 ligand dependent nuclear receptor interacting factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:113,523,567...113,611,043
Ensembl chr 1:126,736,039...126,752,907 		JBrowse link
G C Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISO (PMID:23542155) UniProt PMID:23542155 NCBI chrNW_004955435:14,467,123...14,485,109
Ensembl chrNW_004955435:14,469,488...14,484,632 		JBrowse link
G R Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23542155)		 UniProt
Ensembl
RGD		 PMID:23542155 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:194,231,397...194,322,489
Ensembl chr 2:194,230,951...194,322,483 		JBrowse link
G M Lrif1 ligand dependent nuclear receptor interacting factor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:106,592,256...106,643,893
Ensembl chr 3:106,592,303...106,643,893 		JBrowse link
G H LRIF1 ligand dependent nuclear receptor interacting factor 1 involved_in IMP (PMID:23542155) UniProt PMID:23542155 NCBI chr 1:110,874,957...110,963,922
Ensembl chr 1:110,947,190...110,963,965 		JBrowse link
G N Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004624825:7,513,481...7,527,716
Ensembl chrNW_004624825:7,513,481...7,527,695 		JBrowse link
G G METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chr29:21,967,309...21,981,251
Ensembl chr29:21,963,982...21,981,579 		JBrowse link
G P METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:77,661,945...77,679,459
Ensembl chr 7:77,662,058...77,695,934 		JBrowse link
G S Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936880:646,835...661,312
Ensembl chrNW_004936880:644,079...661,544 		JBrowse link
G D METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:18,528,755...18,546,303
Ensembl chr15:18,528,772...18,546,531 		JBrowse link
G B METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906 		JBrowse link
G C Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955550:2,211,270...2,227,715
Ensembl chrNW_004955550:2,211,270...2,227,715 		JBrowse link
G R Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041 		JBrowse link
G M Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585 		JBrowse link
G H METTL3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in IDA (PMID:27602518) UniProt PMID:27602518 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342 		JBrowse link
G N Rbm15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004624772:6,084,340...6,092,546
Ensembl chrNW_004624772:6,085,542...6,093,069 		JBrowse link
G G RBM15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chr20:23,191,916...23,200,626
Ensembl chr20:23,193,349...23,199,524 		JBrowse link
G P RBM15 RNA binding motif protein 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:109,767,464...109,791,555
Ensembl chr 4:109,768,311...109,786,383 		JBrowse link
G S Rbm15 RNA binding motif protein 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936704:1,779,981...1,787,339
Ensembl chrNW_004936704:1,779,482...1,788,710 		JBrowse link
G D RBM15 RNA binding motif protein 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:41,645,765...41,653,621
Ensembl chr 6:41,645,769...41,653,799 		JBrowse link
G B RBM15 RNA binding motif protein 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,987,871...112,996,054
Ensembl chr 1:127,320,147...127,354,537 		JBrowse link
G C Rbm15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955435:13,846,297...13,854,639
Ensembl chrNW_004955435:13,846,297...13,854,639 		JBrowse link
G R Rbm15 RNA binding motif protein 15 involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703 		JBrowse link
G M Rbm15 RNA binding motif protein 15 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:107,212,827...107,244,102
Ensembl chr 3:107,232,737...107,240,989 		JBrowse link
G H RBM15 RNA binding motif protein 15 involved_in IDA (PMID:27602518) UniProt PMID:27602518 NCBI chr 1:110,339,377...110,346,677
Ensembl chr 1:110,338,506...110,346,681 		JBrowse link
G N Rbm15b RNA binding motif protein 15B involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004624730:5,170,042...5,176,573
Ensembl chrNW_004624730:5,170,107...5,172,779 		JBrowse link
G G RBM15B RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:12,732,260...12,735,401
Ensembl chr22:12,732,396...12,735,068 		JBrowse link
G P RBM15B RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:33,664,387...33,671,047
Ensembl chr13:33,664,472...33,667,153 		JBrowse link
G S Rbm15b RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:2,780,110...2,782,775
Ensembl chrNW_004936529:2,780,110...2,782,455 		JBrowse link
G D RBM15B RNA binding motif protein 15B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:38,191,079...38,194,150
Ensembl chr20:38,191,439...38,192,730 		JBrowse link
G B RBM15B RNA binding motif protein 15B involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chr 3:51,321,963...51,325,092 JBrowse link
G C Rbm15b RNA binding motif protein 15B involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955532:3,080,207...3,082,312 JBrowse link
G R Rbm15b RNA binding motif protein 15B involved_in ISO (PMID:27602518) RGD PMID:27602518 NCBI chr 8:107,543,613...107,546,678
Ensembl chr 8:107,525,898...107,551,696 		JBrowse link
G M Rbm15b RNA binding motif protein 15B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:106,758,127...106,764,274
Ensembl chr 9:106,758,117...106,764,627 		JBrowse link
G H RBM15B RNA binding motif protein 15B involved_in IDA (PMID:27602518) UniProt PMID:27602518 NCBI chr 3:51,391,285...51,397,908
Ensembl chr 3:51,391,285...51,397,908 		JBrowse link
G N Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:23542155) UniProt PMID:23542155 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031 		JBrowse link
G G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:23542155) UniProt PMID:23542155 NCBI chr18:61,921,477...62,069,187
Ensembl chr18:61,921,124...62,070,878 		JBrowse link
G P SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:103,809,732...103,986,057
Ensembl chr 6:103,808,066...103,965,335 		JBrowse link
G S Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936672:1,686,070...1,838,315
Ensembl chrNW_004936672:1,685,734...1,838,315 		JBrowse link
G D SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:69,359,286...69,505,067
Ensembl chr 7:69,358,447...69,621,067 		JBrowse link
G B SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887 		JBrowse link
G C Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:23542155) UniProt PMID:23542155 NCBI chrNW_004955402:7,544,265...7,661,191
Ensembl chrNW_004955402:7,544,265...7,649,067 		JBrowse link
G R Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:23542155) RGD PMID:23542155 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G M Smchd1 SMC hinge domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338 		JBrowse link
G H SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in IDA (PMID:23542155) UniProt PMID:23542155 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017 		JBrowse link
G H XIST X inactive specific transcript involved_in IEA RNAcentral GO_REF:0000115 NCBI chr  X:73,820,651...73,852,753
Ensembl chr  X:73,820,649...73,852,723 		JBrowse link
G N Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004624761:346,268...374,954 JBrowse link
G G YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:633,158...670,000
Ensembl chr 7:633,172...671,030 		JBrowse link
G P YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:66,086,528...66,122,717
Ensembl chr 8:66,086,523...66,122,710 		JBrowse link
G S Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936582:130,593...161,275
Ensembl chrNW_004936582:126,736...161,586 		JBrowse link
G D YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chr13:58,818,424...58,858,241
Ensembl chr13:58,818,796...58,857,571 		JBrowse link
G B YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:55,701,639...55,738,377
Ensembl chr 4:62,095,948...62,132,609 		JBrowse link
G C Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO (PMID:27602518) UniProt PMID:27602518 NCBI chrNW_004955447:4,474,920...4,505,359
Ensembl chrNW_004955447:4,476,004...4,504,913 		JBrowse link
G R Ythdc1 YTH N6-methyladenosine RNA binding protein C1 involved_in ISO
ISS		 (PMID:27602518)
GO_REF:0000024		 RGD
UniProt		 PMID:27602518 GO_REF:0000024 NCBI chr14:21,185,438...21,215,934
Ensembl chr14:21,185,440...21,216,028 		JBrowse link
G M Ythdc1 YTH domain containing 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:86,951,349...86,984,518
Ensembl chr 5:86,952,080...86,984,518 		JBrowse link
G H YTHDC1 YTH N6-methyladenosine RNA binding protein C1 involved_in IDA (PMID:27602518) UniProt PMID:27602518 NCBI chr 4:68,310,387...68,350,090
Ensembl chr 4:68,310,387...68,350,090 		JBrowse link
G M Zfy2 zinc finger protein 2, Y-linked acts_upstream_of_or_within IDA (PMID:27742779) MGI PMID:27742779 NCBI chr  Y:2,106,175...2,170,409
Ensembl chr  Y:2,106,015...2,170,409 		JBrowse link
inactivation of paternal X chromosome by genomic imprinting term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24268575) Ensembl
MGI		 PMID:24268575 GO_REF:0000107 NCBI chrNW_004624744:21,092,091...21,121,313
Ensembl chrNW_004624744:21,104,798...21,120,591 		JBrowse link
G G PRDM14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:24268575) MGI PMID:24268575 NCBI chr 8:65,800,454...65,820,190
Ensembl chr 8:65,800,923...65,819,456 		JBrowse link
G P PRDM14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24268575) Ensembl
MGI		 PMID:24268575 GO_REF:0000107 NCBI chr 4:65,273,988...65,295,362
Ensembl chr 4:65,271,315...65,295,178 		JBrowse link
G S Prdm14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24268575) Ensembl
MGI		 PMID:24268575 GO_REF:0000107 NCBI chrNW_004936496:14,789,443...14,820,967
Ensembl chrNW_004936496:14,806,928...14,820,967 		JBrowse link
G D PRDM14 PR/SET domain 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24268575) Ensembl
MGI		 PMID:24268575 GO_REF:0000107 NCBI chr29:19,203,798...19,220,149
Ensembl chr29:19,203,807...19,220,518 		JBrowse link
G B PRDM14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:24268575) MGI PMID:24268575 NCBI chr 8:66,578,674...66,599,360
Ensembl chr 8:68,240,741...68,260,263 		JBrowse link
G C Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:24268575) MGI PMID:24268575 NCBI chrNW_004955444:9,606,310...9,626,772
Ensembl chrNW_004955444:9,612,059...9,626,817 		JBrowse link
G R Prdm14 PR/SET domain 14 acts_upstream_of_or_within ISO MGI:3805889 (PMID:24268575) RGD PMID:24268575 NCBI chr 5:6,082,163...6,092,712
Ensembl chr 5:6,082,442...6,092,712 		JBrowse link
G M Prdm14 PR domain containing 14 acts_upstream_of_or_within IMP (PMID:24268575) MGI PMID:24268575 NCBI chr 1:13,183,649...13,197,467
Ensembl chr 1:13,183,681...13,197,387 		JBrowse link
G H PRDM14 PR/SET domain 14 acts_upstream_of_or_within ISO (PMID:24268575) MGI PMID:24268575 NCBI chr 8:70,051,651...70,071,252
Ensembl chr 8:70,051,651...70,071,693 		JBrowse link
G N Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 acts_upstream_of_or_within ISO (PMID:18425126), (PMID:23754746) MGI PMID:18425126 PMID:23754746 NCBI chrNW_004624770:13,000,532...13,123,346
Ensembl chrNW_004624770:13,000,316...13,124,031 		JBrowse link
G G SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 acts_upstream_of_or_within ISO (PMID:18425126), (PMID:23754746) MGI PMID:18425126 PMID:23754746 NCBI chr18:61,921,477...62,069,187
Ensembl chr18:61,921,124...62,070,878 		JBrowse link
G P SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18425126), (PMID:23754746) Ensembl
MGI		 PMID:18425126 PMID:23754746 GO_REF:0000107 NCBI chr 6:103,809,732...103,986,057
Ensembl chr 6:103,808,066...103,965,335 		JBrowse link
G S Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18425126), (PMID:23754746) Ensembl
MGI		 PMID:18425126 PMID:23754746 GO_REF:0000107 NCBI chrNW_004936672:1,686,070...1,838,315
Ensembl chrNW_004936672:1,685,734...1,838,315 		JBrowse link
G D SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18425126), (PMID:23754746) Ensembl
MGI		 PMID:18425126 PMID:23754746 GO_REF:0000107 NCBI chr 7:69,359,286...69,505,067
Ensembl chr 7:69,358,447...69,621,067 		JBrowse link
G B SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18425126), (PMID:23754746) Ensembl
MGI		 PMID:18425126 PMID:23754746 GO_REF:0000107 NCBI chr18:11,479,742...11,627,035
Ensembl chr18:13,785,912...13,933,887 		JBrowse link
G C Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 acts_upstream_of_or_within ISO (PMID:18425126), (PMID:23754746) MGI PMID:18425126 PMID:23754746 NCBI chrNW_004955402:7,544,265...7,661,191
Ensembl chrNW_004955402:7,544,265...7,649,067 		JBrowse link
G R Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 acts_upstream_of_or_within ISO MGI:3586547 (PMID:18425126), (PMID:23754746) RGD PMID:18425126 PMID:23754746 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665 		JBrowse link
G M Smchd1 SMC hinge domain containing 1 acts_upstream_of_or_within IMP (PMID:18425126), (PMID:23754746) MGI PMID:18425126 PMID:23754746 NCBI chr17:71,651,484...71,782,361
Ensembl chr17:71,651,484...71,782,338 		JBrowse link
G H SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 acts_upstream_of_or_within ISO (PMID:18425126), (PMID:23754746) MGI PMID:18425126 PMID:23754746 NCBI chr18:2,655,726...2,805,017
Ensembl chr18:2,655,726...2,805,017 		JBrowse link
G M Tsix X (inactive)-specific transcript, opposite strand acts_upstream_of_or_within IMP
IGI		 (PMID:15992549)
(PMID:24268575)		 MGI PMID:15992549 PMID:24268575 NCBI chr  X:102,475,123...102,528,563
Ensembl chr  X:102,475,123...102,528,563 		JBrowse link
G H TSIX TSIX transcript, XIST antisense RNA acts_upstream_of_or_within ISO (PMID:24268575)
(PMID:15992549)		 MGI PMID:15992549 PMID:24268575 NCBI chr  X:73,792,205...73,829,231
Ensembl chr  X:73,792,205...73,829,231 		JBrowse link
G R Xist X inactive specific transcript acts_upstream_of_or_within ISO MGI:1336196|MGI:2445460 (PMID:15992549), (PMID:22573614), (PMID:23658530) RGD PMID:15992549 PMID:22573614 PMID:23658530 NCBI chr  X:68,474,987...68,492,500 JBrowse link
G M Xist inactive X specific transcripts acts_upstream_of_or_within IMP
IGI		 (PMID:22573614)
(PMID:15992549)
(PMID:23658530)		 MGI PMID:15992549 PMID:22573614 PMID:23658530 NCBI chr  X:102,503,979...102,526,839
Ensembl chr  X:102,503,972...102,526,860 		JBrowse link
G H XIST X inactive specific transcript acts_upstream_of_or_within ISO (PMID:23658530)
(PMID:15992549)
(PMID:22573614)		 MGI PMID:15992549 PMID:22573614 PMID:23658530 NCBI chr  X:73,820,651...73,852,753
Ensembl chr  X:73,820,649...73,852,723 		JBrowse link
random inactivation of X chromosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G N Brca1 BRCA1 DNA repair associated acts_upstream_of_or_within ISO (PMID:12419249) MGI PMID:12419249 NCBI chrNW_004624795:1,186,043...1,238,986
Ensembl chrNW_004624795:1,188,136...1,241,964 		JBrowse link
G G BRCA1 BRCA1 DNA repair associated acts_upstream_of_or_within ISO (PMID:12419249) MGI PMID:12419249 NCBI chr16:63,162,827...63,243,928 JBrowse link
G P BRCA1 BRCA1 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12419249) Ensembl
MGI		 PMID:12419249 GO_REF:0000107 NCBI chr12:19,788,087...19,854,515
Ensembl chr12:19,786,020...19,854,668 		JBrowse link
G S Brca1 BRCA1 DNA repair associated acts_upstream_of_or_within ISO (PMID:12419249) MGI PMID:12419249 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G D BRCA1 BRCA1 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12419249) Ensembl
MGI		 PMID:12419249 GO_REF:0000107 NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G B BRCA1 BRCA1 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12419249) Ensembl
MGI		 PMID:12419249 GO_REF:0000107 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G C Brca1 BRCA1 DNA repair associated acts_upstream_of_or_within ISO (PMID:12419249) MGI PMID:12419249 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528 		JBrowse link
G R Brca1 BRCA1, DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:98974 (PMID:12419249)		 Ensembl
RGD		 PMID:12419249 GO_REF:0000107 NCBI chr10:86,417,441...86,477,762
Ensembl chr10:86,418,000...86,477,304 		JBrowse link
G M Brca1 breast cancer 1, early onset acts_upstream_of_or_within IGI (PMID:12419249) MGI PMID:12419249 NCBI chr11:101,379,587...101,442,808
Ensembl chr11:101,379,590...101,442,781 		JBrowse link
G H BRCA1 BRCA1 DNA repair associated involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12419249) Ensembl
MGI		 PMID:12419249 GO_REF:0000107 NCBI chr17:43,044,295...43,170,327
Ensembl chr17:43,044,295...43,170,245 		JBrowse link
G N Cdyl chromodomain Y like involved_in ISO (MGI:5551942|PMID:24144980) UniProt PMID:24144980 MGI:5551942 NCBI chrNW_004624756:20,261,150...20,471,697
Ensembl chrNW_004624756:20,261,019...20,406,338 		JBrowse link
G G CDYL chromodomain Y like involved_in ISO (MGI:5551942|PMID:24144980) UniProt PMID:24144980 MGI:5551942 NCBI chr17:67,222,212...67,396,735
Ensembl chr17:67,222,210...67,396,630 		JBrowse link
G P CDYL chromodomain Y like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:2,845,903...2,967,537
Ensembl chr 7:2,846,090...2,966,240 		JBrowse link
G S Cdyl chromodomain Y like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:7,525,618...7,601,184
Ensembl chrNW_004936534:7,525,612...7,594,813 		JBrowse link
G D CDYL chromodomain Y like involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:4,844,757...5,074,967
Ensembl chr35:4,844,779...5,073,670 		JBrowse link
G B CDYL chromodomain Y like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:4,607,088...4,790,742
Ensembl chr 6:4,737,306...4,976,777 		JBrowse link
G C Cdyl chromodomain Y like involved_in ISO (MGI:5551942|PMID:24144980) UniProt PMID:24144980 MGI:5551942 NCBI chrNW_004955465:8,570,197...8,780,551
Ensembl chrNW_004955465:8,568,121...8,780,569 		JBrowse link
G R Cdyl chromodomain Y-like involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5551942|PMID:24144980)		 UniProt
Ensembl
RGD		 PMID:24144980 GO_REF:0000024 GO_REF:0000107 MGI:5551942 NCBI chr17:28,982,009...29,204,345
Ensembl chr17:28,982,037...29,204,313 		JBrowse link
G M Cdyl chromodomain protein, Y chromosome-like involved_in IDA (MGI:5551942|PMID:24144980) UniProt PMID:24144980 MGI:5551942 NCBI chr13:35,843,801...36,058,047
Ensembl chr13:35,843,816...36,058,046 		JBrowse link
G H CDYL chromodomain Y like involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:4,706,138...4,955,544
Ensembl chr 6:4,706,159...4,955,551 		JBrowse link
G M Ctcf CCCTC-binding factor acts_upstream_of_or_within TAS (PMID:11743158) MGI PMID:11743158 NCBI chr 8:106,351,135...106,409,554
Ensembl chr 8:106,363,200...106,409,554 		JBrowse link
G R Ftx FTX transcript, XIST regulator acts_upstream_of_or_within ISO MGI:1342291|MGI:2180008 (PMID:21118898), (PMID:24613346) RGD PMID:21118898 PMID:24613346 NCBI chr  X:68,588,349...68,630,338 JBrowse link
G M Ftx Ftx transcript, Xist regulator, non-protein coding acts_upstream_of_or_within IMP
IGI		 (PMID:21118898), (PMID:24613346)
(PMID:24613346)		 MGI PMID:21118898 PMID:24613346 NCBI chr  X:102,604,516...102,667,360
Ensembl chr  X:102,604,513...102,667,396 		JBrowse link
G H FTX FTX transcript, XIST regulator acts_upstream_of_or_within ISO (PMID:24613346)
(PMID:21118898), (PMID:24613346)		 MGI PMID:21118898 PMID:24613346 NCBI chr  X:74,028,136...74,293,574
Ensembl chr  X:73,940,435...74,293,574 		JBrowse link
G N Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO (PMID:27892467) MGI PMID:27892467 NCBI chrNW_004624756:10,932,148...11,079,609
Ensembl chrNW_004624756:10,933,717...11,199,077 		JBrowse link
G G JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr17:56,651,752...56,928,650
Ensembl chr17:56,651,596...56,928,126 		JBrowse link
G P JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr 7:11,358,243...11,601,715
Ensembl chr 7:11,359,230...11,601,401 		JBrowse link
G S Jarid2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chrNW_004936552:1,566,382...1,786,837
Ensembl chrNW_004936552:1,566,788...1,785,490 		JBrowse link
G D JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr35:14,476,656...14,737,535
Ensembl chr35:14,445,914...14,736,158 		JBrowse link
G B JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr 6:15,100,415...15,376,505
Ensembl chr 6:15,466,050...15,739,170 		JBrowse link
G C Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO (PMID:27892467) MGI PMID:27892467 NCBI chrNW_004955590:383,810...512,854
Ensembl chrNW_004955590:384,817...626,684 		JBrowse link
G R Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within ISO MGI:5888989 (PMID:27892467) RGD PMID:27892467 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690 		JBrowse link
G M Jarid2 jumonji and AT-rich interaction domain containing 2 acts_upstream_of_or_within IMP (PMID:27892467) MGI PMID:27892467 NCBI chr13:44,881,817...45,075,119
Ensembl chr13:44,882,950...45,075,119 		JBrowse link
G H JARID2 jumonji and AT-rich interaction domain containing 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr 6:15,246,069...15,522,042
Ensembl chr 6:15,246,069...15,522,042 		JBrowse link
G R Jpx JPX transcript, XIST activator acts_upstream_of
acts_upstream_of_or_within		 ISO MGI:4887255 (PMID:21029862)
MGI:1342291|MGI:1926128 (PMID:21029862), (PMID:24613346)		 RGD PMID:21029862 PMID:24613346 NCBI chr  X:68,511,491...68,665,132 JBrowse link
G M Jpx Jpx transcript, Xist activator (non-protein coding) acts_upstream_of_or_within IGI
IMP		 (PMID:24613346)
(PMID:21029862)		 MGI PMID:21029862 PMID:24613346 NCBI chr  X:102,537,164...102,550,031
Ensembl chr  X:102,537,158...102,609,302 		JBrowse link
G H JPX JPX transcript, XIST activator acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:21029862)
(PMID:24613346)		 MGI PMID:21029862 PMID:24613346 NCBI chr  X:73,944,324...74,070,384
Ensembl chr  X:73,944,182...74,070,408 		JBrowse link
G P LOC100151952 E3 ubiquitin-protein ligase RLIM-like involved_in IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr  X:30,364,427...30,367,647 JBrowse link
G B LOC103785028 polycomb protein SUZ12 acts_upstream_of_or_within ISO (PMID:27892467) MGI PMID:27892467 NCBI chr17:24,790,921...24,853,790 JBrowse link
G D LOC491808 E3 ubiquitin-protein ligase RLIM-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr  X:29,455,208...29,459,188 JBrowse link
G N Pcgf3 polycomb group ring finger 3 involved_in ISO (MGI:5908473|PMID:28596365) UniProt PMID:28596365 MGI:5908473 NCBI chrNW_004624755:26,294,675...26,344,864
Ensembl chrNW_004624755:26,294,689...26,326,318 		JBrowse link
G G PCGF3 polycomb group ring finger 3 involved_in ISO (MGI:5908473|PMID:28596365) UniProt PMID:28596365 MGI:5908473 NCBI chr27:48,015,976...48,077,688
Ensembl chr27:48,020,010...48,053,520 		JBrowse link
G P PCGF3 polycomb group ring finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:140,435...189,796
Ensembl chr 8:140,446...182,261 		JBrowse link
G S Pcgf3 polycomb group ring finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:22,349,166...22,373,256
Ensembl chrNW_004936477:22,349,171...22,373,393 		JBrowse link
G D PCGF3 polycomb group ring finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:91,673,424...91,708,751
Ensembl chr 3:91,676,496...91,708,754 		JBrowse link
G B PCGF3 polycomb group ring finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:802,990...874,063
Ensembl chr 4:746,137...805,443 		JBrowse link
G C Pcgf3 polycomb group ring finger 3 involved_in ISO (MGI:5908473|PMID:28596365) UniProt PMID:28596365 MGI:5908473 NCBI chrNW_004955514:307,331...350,039
Ensembl chrNW_004955514:307,332...350,039 		JBrowse link
G R Pcgf3 polycomb group ring finger 3 involved_in ISO (MGI:5908473|PMID:28596365) RGD PMID:28596365 MGI:5908473 NCBI chr14:1,237,594...1,291,717
Ensembl chr14:1,233,947...1,291,793 		JBrowse link
G M Pcgf3 polycomb group ring finger 3 involved_in IMP (MGI:5908473|PMID:28596365) UniProt PMID:28596365 MGI:5908473 NCBI chr 5:108,609,082...108,654,842
Ensembl chr 5:108,609,098...108,654,842 		JBrowse link
G H PCGF3 polycomb group ring finger 3 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:705,832...770,089
Ensembl chr 4:705,748...770,089 		JBrowse link
G N Pcgf5 polycomb group ring finger 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:2,423,269...2,545,006
Ensembl chrNW_004624737:2,489,788...2,540,488 		JBrowse link
G G PCGF5 polycomb group ring finger 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:84,494,147...84,613,269
Ensembl chr 9:84,494,202...84,607,330 		JBrowse link
G P PCGF5 polycomb group ring finger 5 involved_in ISO (MGI:5908473|PMID:28596365) UniProt PMID:28596365 MGI:5908473 NCBI chr14:102,827,140...102,961,862
Ensembl chr14:102,636,838...102,961,860 		JBrowse link
G S Pcgf5 polycomb group ring finger 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:3,201,589...3,268,990
Ensembl chrNW_004936601:3,207,250...3,267,372 		JBrowse link
G D PCGF5 polycomb group ring finger 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:5,821,278...5,889,382
Ensembl chr28:5,821,307...5,883,795 		JBrowse link
G B PCGF5 polycomb group ring finger 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:87,908,298...88,029,923
Ensembl chr10:91,492,201...91,549,737 		JBrowse link
G C Pcgf5 polycomb group ring finger 5 involved_in ISO (MGI:5908473|PMID:28596365) UniProt PMID:28596365 MGI:5908473 NCBI chrNW_004955425:1,913,711...1,980,800
Ensembl chrNW_004955425:1,919,228...1,979,874 		JBrowse link
G R Pcgf5 polycomb group ring finger 5 involved_in ISO (MGI:5908473|PMID:28596365) RGD PMID:28596365 MGI:5908473 NCBI chr 1:234,063,854...234,180,022
Ensembl chr 1:234,063,892...234,175,315 		JBrowse link
G M Pcgf5 polycomb group ring finger 5 involved_in IMP (MGI:5908473|PMID:28596365) UniProt PMID:28596365 MGI:5908473 NCBI chr19:36,325,729...36,438,370
Ensembl chr19:36,325,709...36,438,370 		JBrowse link
G H PCGF5 polycomb group ring finger 5 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr10:91,156,219...91,284,337
Ensembl chr10:91,163,012...91,284,337 		JBrowse link
G N Rlim ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 ISO (PMID:19945382)
(PMID:24613346)
(MGI:4418586|PMID:19945382)		 UniProt
MGI		 PMID:19945382 PMID:24613346 MGI:4418586 NCBI chrNW_004624836:6,257,740...6,290,054 JBrowse link
G G RLIM ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613346) Ensembl
MGI
TreeGrafter		 PMID:24613346 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:64,178,159...64,205,759 JBrowse link
G P RLIM ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:24613346) Ensembl
MGI
GO_Central
TreeGrafter		 PMID:24613346 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:59,889,799...59,920,464
Ensembl chr  X:59,893,146...59,920,182 		JBrowse link
G S Rlim ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613346) Ensembl
MGI
TreeGrafter		 PMID:24613346 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936683:930,537...961,792
Ensembl chrNW_004936683:934,338...961,863 		JBrowse link
G D RLIM ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613346) Ensembl
MGI
TreeGrafter		 PMID:24613346 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:57,879,749...57,905,805
Ensembl chr  X:57,885,123...57,889,253 		JBrowse link
G B RLIM ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24613346) Ensembl
MGI
TreeGrafter		 PMID:24613346 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:63,834,345...63,865,874
Ensembl chr  X:73,959,365...73,982,412 		JBrowse link
G C Rlim ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 ISO (PMID:19945382)
(PMID:24613346)
(MGI:4418586|PMID:19945382)		 UniProt
MGI		 PMID:19945382 PMID:24613346 MGI:4418586 NCBI chrNW_004955562:508,723...531,699
Ensembl chrNW_004955562:510,739...531,830 		JBrowse link
G R Rlim ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:19945382)
MGI:1926128|MGI:2180008 (PMID:24613346)
GO_REF:0000033
(MGI:4418586|PMID:19945382)		 RGD
GO_Central		 PMID:19945382 PMID:24613346 GO_REF:0000033 MGI:4418586 NCBI chr  X:68,983,259...69,004,368
Ensembl chr  X:68,988,375...69,004,271 		JBrowse link
G M Rlim ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 IDA
IBA
IMP
IGI
ISO		 (MGI:4418586|PMID:19945382)
(PMID:24613346)		 UniProt
GO_Central
MGI		 PMID:19945382 PMID:24613346 GO_REF:0000033 GO_REF:0000119 MGI:4418586 MGI:4834177 NCBI chr  X:103,000,770...103,024,886
Ensembl chr  X:103,000,769...103,024,890 		JBrowse link
G H RLIM ring finger protein, LIM domain interacting involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
IDA		 (PMID:24613346)
(PMID:19945382)		 Ensembl
MGI
GO_Central
UniProt		 PMID:19945382 PMID:24613346 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:74,582,976...74,614,624
Ensembl chr  X:74,582,976...74,614,624 		JBrowse link
G N Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:27892467) MGI PMID:27892467 NCBI chrNW_004624875:4,425,486...4,477,338
Ensembl chrNW_004624875:4,425,418...4,477,909 		JBrowse link
G G SUZ12 SUZ12 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr16:25,413,928...25,474,311
Ensembl chr16:25,413,954...25,476,479 		JBrowse link
G P SUZ12 SUZ12 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr12:42,983,597...43,032,671
Ensembl chr12:42,983,601...43,032,654 		JBrowse link
G S Suz12 SUZ12 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chrNW_004936538:2,921,987...2,971,521
Ensembl chrNW_004936538:2,921,719...2,971,552 		JBrowse link
G D SUZ12 SUZ12 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr 9:40,992,797...41,038,729
Ensembl chr 9:40,994,825...41,038,645 		JBrowse link
G C Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:27892467) MGI PMID:27892467 NCBI chrNW_004955481:6,867,175...6,917,548
Ensembl chrNW_004955481:6,867,175...6,917,548 		JBrowse link
G R Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within ISO (PMID:27892467) RGD PMID:27892467 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738 		JBrowse link
G M Suz12 SUZ12 polycomb repressive complex 2 subunit acts_upstream_of_or_within IMP (PMID:27892467) MGI PMID:27892467 NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949 		JBrowse link
G H SUZ12 SUZ12 polycomb repressive complex 2 subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27892467) Ensembl
MGI		 PMID:27892467 GO_REF:0000107 NCBI chr17:31,937,007...32,001,038
Ensembl chr17:31,937,007...32,001,038 		JBrowse link
G R Xist X inactive specific transcript involved_in
acts_upstream_of_or_within		 ISO (PMID:9335338)
MGI:104537 (PMID:12419249), (PMID:27892467)		 RGD PMID:9335338 PMID:12419249 PMID:27892467 NCBI chr  X:68,474,987...68,492,500 JBrowse link
G M Xist inactive X specific transcripts involved_in
acts_upstream_of_or_within		 ISO
IDA
IGI		 (PMID:9335338)
(PMID:27892467)
(PMID:12419249)		 FlyBase
MGI		 PMID:9335338 PMID:12419249 PMID:27892467 NCBI chr  X:102,503,979...102,526,839
Ensembl chr  X:102,503,972...102,526,860 		JBrowse link
G H XIST X inactive specific transcript involved_in
acts_upstream_of_or_within		 TAS
ISO
IEP		 (PMID:32482714)
(PMID:12419249)
(PMID:27892467)
(PMID:9335338)		 ARUK-UCL
MGI
FlyBase		 PMID:9335338 PMID:12419249 PMID:27892467 PMID:32482714 NCBI chr  X:73,820,651...73,852,753
Ensembl chr  X:73,820,649...73,852,723 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 180413
    metabolic process 103361
      regulation of metabolic process 61011
        regulation of macromolecule metabolic process 55678
          regulation of macromolecule biosynthetic process 47993
            regulation of gene expression 46838
              epigenetic regulation of gene expression 2604
                sex-chromosome dosage compensation 185
                  dosage compensation by inactivation of X chromosome 165
                    inactivation of paternal X chromosome by genomic imprinting 25
                    random inactivation of X chromosome 82
Path 2
Term Annotations click to browse term
  biological_process 180413
    biological regulation 118873
      regulation of biological process 115328
        regulation of metabolic process 61011
          regulation of biosynthetic process 49863
            regulation of cellular biosynthetic process 48980
              regulation of macromolecule biosynthetic process 47993
                regulation of gene expression 46838
                  negative regulation of gene expression 12890
                    negative regulation of gene expression, epigenetic 1612
                      heterochromatin formation 1299
                        dosage compensation by inactivation of X chromosome 165
                          inactivation of paternal X chromosome by genomic imprinting 25
                          random inactivation of X chromosome 82
paths to the root