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ONTOLOGY REPORT - ANNOTATIONS


Term:negative regulation of gene expression
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Accession:GO:0010629 term browser browse the term
Definition:Any process that decreases the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
Comment:This term covers any process that negatively regulates the rate of production of a mature gene product, and so includes processes that negatively regulate that rate by reducing the level, stability or availability of intermediates in the process of gene expression. For example, it covers any process that reduces the level, stability or availability of mRNA or circRNA for translation and thereby reduces the rate of production of the encoded protein via translation.



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negative regulation of gene expression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015743.1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024
G Abcc2 ATP binding cassette subfamily C member 2 involved_in IMP PMID:17437408 ARUK-UCL PMID:17437408 RGD:14929203 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3629477|PMID:12920182) RGD PMID:12920182 MGI:3629477 NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655
JBrowse link
G Ace angiotensin I converting enzyme involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
JBrowse link
G Acvr1b activin A receptor type 1B acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446) RGD PMID:23152446 MGI:5461254 NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673
JBrowse link
G Acvrl1 activin A receptor like type 1 involved_in ISO (MGI:2674189|PMID:12941632) RGD PMID:12941632 MGI:2674189 NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
JBrowse link
G Adam10 ADAM metallopeptidase domain 10 acts_upstream_of_or_within ISO (PMID:24530397) RGD PMID:24530397 NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
JBrowse link
G Adipor2 adiponectin receptor 2 IMP RGD PMID:29237572 RGD:24922203 NCBI chr 4:152,524,604...152,588,848
Ensembl chr 4:152,524,623...152,559,355
JBrowse link
G Adnp activity-dependent neuroprotector homeobox IDA p53 RGD PMID:15314252 RGD:2312780 NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
JBrowse link
G Aff2 AF4/FMR2 family, member 2 acts_upstream_of_or_within ISO (MGI:5496978|PMID:23562910) RGD PMID:23562910 MGI:5496978 NCBI chr  X:147,928,130...148,432,484
Ensembl chr  X:147,928,407...148,429,995
JBrowse link
G Agt angiotensinogen involved_in ISO (PMID:24296617) RGD PMID:24296617 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Aif1 allograft inflammatory factor 1 IMP 10 proteins, including ADAM3 RGD PMID:16157606 RGD:2313017 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Akirin2 akirin 2 IMP MKP-1 RGD PMID:18460465 RGD:2306009 NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568
JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (MGI:4881905|PMID:19933931) RGD PMID:19933931 MGI:4881905 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Anapc2 anaphase promoting complex subunit 2 IMP Ppfia1 RGD PMID:17419996 RGD:14696670 NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
JBrowse link
G Anxa7 annexin A7 involved_in ISO (PMID:24007983) RGD PMID:24007983 NCBI chr15:3,821,798...3,849,659
Ensembl chr15:3,821,845...3,849,385
JBrowse link
G Apln apelin involved_in ISO RNAcentral:URS00000F0F49_9606|RNAcentral:URS00000F6E49_9606 (PMID:23263626) RGD PMID:23263626 NCBI chr  X:127,180,801...127,213,567
Ensembl chr  X:127,203,823...127,213,391
JBrowse link
G Aplnr apelin receptor acts_upstream_of ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052
Ensembl chr 3:70,217,385...70,221,050
JBrowse link
G Apoe apolipoprotein E involved_in ISO (MGI:6148510|PMID:18377911) RGD PMID:18377911 MGI:6148510 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G App amyloid beta precursor protein involved_in ISO UniProtKB:P56704 (PMID:18234671), (PMID:26006083)
UniProtKB:P49768 (PMID:22198949), (PMID:27853422), (PMID:28008308), (PMID:29061364)
RGD PMID:18234671 PMID:22198949 PMID:26006083 PMID:27853422 PMID:28008308 More... NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in ISO (PMID:27780851) RGD PMID:27780851 NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:25147342)
(MGI:6368228|PMID:25147342)
RGD PMID:25147342 MGI:6368228 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
JBrowse link
G Aurka aurora kinase A involved_in ISO
IEA
(PMID:28218735)
GO_REF:0000107
RGD
Ensembl
PMID:28218735 GO_REF:0000107 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:3804621|PMID:18076571) RGD PMID:18076571 MGI:3804621 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Bak1 BCL2-antagonist/killer 1 IMP p16, cyclin D1, COX 2 RGD PMID:18349538 RGD:2316126 NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) RGD PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:3045473 (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) RGD PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bcl11a BAF chromatin remodeling complex subunit BCL11A acts_upstream_of_or_within ISO MGI:4358088 (MGI:4355757|PMID:19657335) RGD PMID:19657335 MGI:4355757 NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:28124060)
(MGI:3512872|PMID:15322112)
GO_REF:0000107
RGD
Ensembl
PMID:15322112 PMID:28124060 GO_REF:0000107 MGI:3512872 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2135612|PMID:11493558)
(PMID:28124060)
Ensembl
RGD
PMID:11493558 PMID:28124060 GO_REF:0000107 MGI:2135612 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A acts_upstream_of_or_within ISO (MGI:2175930|PMID:11854453) RGD PMID:11854453 MGI:2175930 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
JBrowse link
G Brip1 BRCA1 interacting helicase 1 IDA RGD PMID:12511571 RGD:11251702 NCBI chr10:70,907,266...71,031,502
Ensembl chr10:70,907,371...71,030,324
JBrowse link
G C1qtnf3 C1q and TNF related 3 involved_in ISO (PMID:20952387) RGD PMID:20952387 NCBI chr 2:59,917,099...59,939,519
Ensembl chr 2:59,917,188...59,939,433
JBrowse link
G Ccdc3 coiled-coil domain containing 3 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:28827783)
(MGI:6108413|PMID:28827783)
PMID:21873635
RGD PMID:28827783 PMID:21873635 MGI:6108413, RGD:13792537 NCBI chr17:73,031,891...73,135,173
Ensembl chr17:73,035,045...73,135,337
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:21403648)
UniProt
RGD
PMID:21403648 GO_REF:0000024 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO MGI:2663631 (MGI:4413658|PMID:18597638) RGD PMID:18597638 MGI:4413658 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Ccnb1 cyclin B1 IMP c-mos RGD PMID:15291744 RGD:1578405 NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
JBrowse link
G Ccr1 C-C motif chemokine receptor 1 involved_in ISO (PMID:21403648) RGD PMID:21403648 NCBI chr 8:123,556,286...123,561,841 JBrowse link
G Cd28 Cd28 molecule involved_in ISO
IEA
(PMID:23817958)
GO_REF:0000107
RGD
Ensembl
PMID:23817958 GO_REF:0000107 NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
JBrowse link
G Cd34 CD34 molecule involved_in ISO
ISS
(PMID:15969628)
GO_REF:0000024
RGD
UniProt
PMID:15969628 GO_REF:0000024 NCBI chr13:106,480,074...106,499,462
Ensembl chr13:106,480,043...106,499,832
JBrowse link
G Cd36 CD36 molecule involved_in ISO (MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:4850200 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Cd3e CD3e molecule involved_in ISO (PMID:23817958) RGD PMID:23817958 NCBI chr 8:45,303,848...45,315,297
Ensembl chr 8:45,303,852...45,315,022
JBrowse link
G Cd46 CD46 molecule involved_in ISO (PMID:23086448) RGD PMID:23086448 NCBI chr13:106,575,586...106,606,325 JBrowse link
G Cdk1 cyclin-dependent kinase 1 acts_upstream_of_or_within IMP PMID:28350193 ARUK-UCL PMID:28350193 RGD:40902962 NCBI chr20:19,266,226...19,281,417
Ensembl chr20:19,266,248...19,281,408
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A acts_upstream_of_or_within ISO MGI:1933751 (MGI:3617096|PMID:11981756) RGD PMID:11981756 MGI:3617096 NCBI chr20:7,149,177...7,159,727
Ensembl chr20:7,149,217...7,159,585
JBrowse link
G Celf1 CUGBP, Elav-like family member 1 acts_upstream_of_or_within ISO (PMID:27230130) RGD PMID:27230130 NCBI chr 3:76,924,591...76,999,429
Ensembl chr 3:76,924,613...76,999,426
JBrowse link
G Chek1_v2 checkpoint kinase 1, variant 2 IDA p53-mediated RGD PMID:11687578 RGD:70230
G Cilp cartilage intermediate layer protein involved_in ISO (PMID:29167509) RGD PMID:29167509 NCBI chr 8:65,777,281...65,792,251
Ensembl chr 8:65,777,281...65,792,251
JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 involved_in IMP
ISO
ISS
PMID:26240138
(PMID:15051727)
GO_REF:0000024
RGD
UniProt
PMID:15051727 PMID:26240138 GO_REF:0000024, RGD:13210532 NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
JBrowse link
G Cldn19 claudin 19 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr 5:132,862,939...132,870,364
Ensembl chr 5:132,863,267...132,868,227
JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:27593915) RGD PMID:27593915 NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998)
(MGI:6369916|PMID:30734065)
RGD PMID:25323998 PMID:30734065 MGI:6369916 NCBI chr11:82,212,822...82,214,248 JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (PMID:25038453) RGD PMID:25038453 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Cnpy2 canopy FGF signaling regulator 2 acts_upstream_of ISO (MGI:5427047|PMID:22378787) RGD PMID:22378787 MGI:5427047 NCBI chr 7:748,877...754,352
Ensembl chr 7:749,008...755,519
JBrowse link
G Cpne1 copine 1 involved_in ISO (PMID:18212740) RGD PMID:18212740 NCBI chr 3:144,587,548...144,629,603
Ensembl chr 3:144,588,995...144,598,636
JBrowse link
G Creb1 cAMP responsive element binding protein 1 IMP RGD PMID:21816899 RGD:10059418 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISO (PMID:27121396) RGD PMID:27121396 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456
JBrowse link
G Crh corticotropin releasing hormone IMP Lhb RGD PMID:20663987 RGD:5508201 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919
JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 IMP Lhb, Fshb RGD PMID:19193717 RGD:2317015 NCBI chr 4:84,222,897...84,265,924
Ensembl chr 4:84,224,002...84,265,904
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein involved_in ISO (PMID:23959425) RGD PMID:23959425 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
G Cryaa crystallin, alpha A acts_upstream_of_or_within ISO MGI:1858025 (MGI:3758141|PMID:17893660) RGD PMID:17893660 MGI:3758141 NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349
JBrowse link
G Cryab crystallin, alpha B acts_upstream_of_or_within ISO MGI:2652177 (MGI:3758141|PMID:17893660) RGD PMID:17893660 MGI:3758141 NCBI chr 8:51,093,441...51,099,161
Ensembl chr 8:51,093,441...51,099,157
JBrowse link
G Ctcf CCCTC-binding factor involved_in IEA
ISO
GO_REF:0000107
(MGI:3852297|PMID:18614575)
Ensembl
RGD
PMID:18614575 GO_REF:0000107 MGI:3852297 NCBI chr19:33,521,726...33,571,124
Ensembl chr19:33,529,319...33,571,123
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IMP
ISO
IEA
PMID:23270756
(MGI:3836885|PMID:19122665)
GO_REF:0000107
RGD
Ensembl
PMID:19122665 PMID:23270756 GO_REF:0000107 MGI:3836885, RGD:13210526 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO (PMID:24369117) RGD PMID:24369117 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131
JBrowse link
G Dicer1 dicer 1 ribonuclease III acts_upstream_of
involved_in
ISO (PMID:22105995)
(PMID:23322395)
RGD PMID:22105995 PMID:23322395 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Dip2a disco-interacting protein 2 homolog A involved_in ISO (PMID:20860622) RGD PMID:20860622 NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217
JBrowse link
G Dll4 delta like canonical Notch ligand 4 involved_in ISO (PMID:23388056) RGD PMID:23388056 NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:27021683)
MGI:3613486|MGI:5566775 (MGI:6270117|PMID:29117290)
RGD PMID:27021683 PMID:29117290 MGI:6270117 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO MGI:1857883 (MGI:3775586|PMID:18276788) RGD PMID:18276788 MGI:3775586 NCBI chr 4:116,490,877...116,690,709
Ensembl chr 4:116,490,616...116,690,709
JBrowse link
G Edn1 endothelin 1 involved_in IDA PMID:28484848 BHF-UCL PMID:28484848 RGD:13601996 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO (MGI:5478659|PMID:23152784) RGD PMID:23152784 MGI:5478659 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 IMP Arc RGD PMID:17632064 RGD:10044262 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057
JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in ISO (MGI:5605894|PMID:25056700) RGD PMID:25056700 MGI:5605894 NCBI chr 6:25,455,974...25,463,736
Ensembl chr 6:25,445,298...25,463,698
JBrowse link
G Eng endoglin involved_in ISO (MGI:2674189|PMID:12941632) RGD PMID:12941632 MGI:2674189 NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:3826692|PMID:18824542) RGD PMID:18824542 MGI:3826692 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Erp29 endoplasmic reticulum protein 29 involved_in ISO (PMID:22064321) RGD PMID:22064321 NCBI chr12:35,089,698...35,095,952
Ensembl chr12:35,089,707...35,096,376
JBrowse link
G Esr1 estrogen receptor 1 involved_in ISO (PMID:21695196) RGD PMID:21695196 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002
JBrowse link
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit IMP Cdkn1c, also known as p57kip2, cyclin-dependent kinase inhibitor 1c RGD PMID:22821416 RGD:7242953 NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO RNAcentral:URS00001CC379_9606 (PMID:23823476) RGD PMID:23823476 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Fermt1 FERM domain containing kindlin 1 involved_in ISO (MGI:5571208|PMID:24681597) RGD PMID:24681597 MGI:5571208 NCBI chr 3:120,171,301...120,213,555
Ensembl chr 3:120,171,561...120,213,555
JBrowse link
G Fgf19 fibroblast growth factor 19 involved_in ISO (PMID:19085950) RGD PMID:19085950 NCBI chr 1:200,056,656...200,059,944
Ensembl chr 1:200,056,644...200,060,287
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO MGI:95525 (MGI:3775898|PMID:18191119), (MGI:5548021|PMID:24259513) RGD PMID:18191119 PMID:24259513 MGI:3775898 MGI:5548021 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:2135670 (MGI:4437389|PMID:20053668) RGD PMID:20053668 MGI:4437389 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 acts_upstream_of_or_within ISO MGI:95522 (MGI:5548021|PMID:24259513) RGD PMID:24259513 MGI:5548021 NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
JBrowse link
G Flcn folliculin involved_in ISS
ISO
GO_REF:0000024
(MGI:5463828|PMID:23150719)
UniProt
RGD
PMID:23150719 GO_REF:0000024 MGI:5463828 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Flot2 flotillin 2 involved_in ISO (PMID:24612608) RGD PMID:24612608 NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in IMP
ISO
ISS
(MGI:5473740|PMID:23235829)
GO_REF:0000024
RGD
UniProt
PMID:23235829 PMID:24338128 GO_REF:0000024 MGI:5473740, RGD:11667958 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Foxo1 forkhead box O1 involved_in ISO (PMID:24280217) RGD PMID:24280217 NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
JBrowse link
G Foxp1 forkhead box P1 involved_in ISO (PMID:30111844) RGD PMID:30111844 NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
JBrowse link
G Foxp3 forkhead box P3 acts_upstream_of_or_within ISO (MGI:5569680|PMID:24501220) RGD PMID:24501220 MGI:5569680 NCBI chr  X:14,908,494...14,924,994
Ensembl chr  X:14,908,494...14,923,838
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:4850200|PMID:20978343) RGD PMID:20978343 MGI:4850200 NCBI chr20:42,767,733...42,960,903
Ensembl chr20:42,766,369...42,959,911
JBrowse link
G Gas2l1 growth arrest-specific 2 like 1 involved_in ISS
ISO
PMID:19375645
(PMID:19375645)
RGD PMID:19375645 PMID:19375645 RGD:12790653 NCBI chr14:79,951,702...79,961,830
Ensembl chr14:79,950,555...79,961,438
JBrowse link
G Gata2 GATA binding protein 2 involved_in ISO (PMID:27780851) RGD PMID:27780851 NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
JBrowse link
G Gata3 GATA binding protein 3 acts_upstream_of_or_within ISO MGI:3696958 (MGI:3708031|PMID:17357106) RGD PMID:17357106 MGI:3708031 NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
JBrowse link
G Gata4 GATA binding protein 4 involved_in ISO (MGI:5780531|PMID:25590961) RGD PMID:25590961 MGI:5780531 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Gata5 GATA binding protein 5 involved_in ISO (MGI:5286818|PMID:21633169) RGD PMID:21633169 MGI:5286818 NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
JBrowse link
G Ggnbp2 gametogenetin binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5779255|PMID:26764350)
Ensembl
RGD
PMID:26764350 GO_REF:0000107 MGI:5779255 NCBI chr10:69,711,527...69,743,134
Ensembl chr10:69,711,532...69,743,365
JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2445472 (MGI:3849919|PMID:19439426) RGD PMID:19439426 MGI:3849919 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO
IEA
IDA
(PMID:23840305)
GO_REF:0000107
PMID:23907461
RGD
Ensembl
PMID:23840305 PMID:23907461 GO_REF:0000107, RGD:8553942 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in ISO
IEA
(PMID:24161931)
GO_REF:0000107
RGD
Ensembl
PMID:24161931 GO_REF:0000107 NCBI chr16:32,917,826...32,919,880
Ensembl chr16:32,917,823...32,919,891
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO UniProtKB:O00182 (PMID:25578313) RGD PMID:25578313 NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO (PMID:16581785) RGD PMID:16581785 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO (MGI:5569711|PMID:23926128) RGD PMID:23926128 MGI:5569711 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hdac8 histone deacetylase 8 IMP Stx1a RGD PMID:28559304 RGD:13208603 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IMP RGD PMID:19670267 RGD:9685170 NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 involved_in
acts_upstream_of_or_within
ISO (MGI:3604167|PMID:16025100)
(MGI:5427763|PMID:22615585)
RGD PMID:16025100 PMID:22615585 MGI:3604167 MGI:5427763 NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 acts_upstream_of_or_within
involved_in
ISO MGI:2447620 (MGI:4454633|PMID:20382855), (MGI:5427763|PMID:22615585)
(MGI:3604167|PMID:16025100)
RGD PMID:16025100 PMID:20382855 PMID:22615585 MGI:3604167 MGI:4454633 MGI:5427763 NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like acts_upstream_of_or_within ISO (MGI:5427763|PMID:22615585) RGD PMID:22615585 MGI:5427763 NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO
IEA
(PMID:26879375)
GO_REF:0000107
RGD
Ensembl
PMID:26879375 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hinfp histone H4 transcription factor involved_in ISO (PMID:15541338), (PMID:17974976) RGD PMID:15541338 PMID:17974976 NCBI chr 8:44,634,333...44,644,288
Ensembl chr 8:44,634,333...44,641,000
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgb2l1 high mobility group box 2-like 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP Mmp9 RGD PMID:16683234 RGD:10042976 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K IMP Orm1 RGD PMID:9553145 RGD:2303817 NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) RGD PMID:23027131 NCBI chr 1:196,290,127...196,299,823
Ensembl chr 1:196,296,263...196,300,615
JBrowse link
G Hsf1 heat shock transcription factor 1 IMP Igf2r RGD PMID:24786827 RGD:10402547 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Hspa4 heat shock protein family A (Hsp70) member 4 IMP Tnf, Il1b, Icam1, Nos2 RGD PMID:17473852 RGD:5688754 NCBI chr10:37,408,025...37,449,080
Ensembl chr10:37,408,025...37,449,001
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein acts_upstream_of_or_within ISO (MGI:4453908|PMID:20231428) RGD PMID:20231428 MGI:4453908 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
JBrowse link
G Id2 inhibitor of DNA binding 2 involved_in IMP
ISO
ISS
p21
(MGI:4412240|PMID:18474814)
GO_REF:0000024
RGD
UniProt
PMID:18474814 PMID:11706002 GO_REF:0000024 MGI:4412240, RGD:619536 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
JBrowse link
G Id3 inhibitor of DNA binding 3, HLH protein acts_upstream_of_or_within ISO (MGI:5512805|PMID:23523789) RGD PMID:23523789 MGI:5512805 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
JBrowse link
G Ifng interferon gamma involved_in ISO (PMID:23817958)
(MGI:6304699|PMID:29061364)
RGD PMID:23817958 PMID:29061364 MGI:6304699 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO (PMID:29167509)
(MGI:4881905|PMID:19933931)
RGD PMID:19933931 PMID:29167509 MGI:4881905 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
JBrowse link
G Il1b interleukin 1 beta IDA Nr2e1 RGD PMID:23168994 RGD:7175538 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 acts_upstream_of_or_within ISO MGI:3530363 (MGI:3528799|PMID:15654325) RGD PMID:15654325 MGI:3528799 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500
JBrowse link
G Insr insulin receptor IMP SOCS3 levels in hypothalamus RGD PMID:17585961 RGD:2290473 NCBI chr12:1,193,193...1,330,976
Ensembl chr12:1,197,100...1,330,883
JBrowse link
G Iqgap3 IQ motif containing GTPase activating protein 3 acts_upstream_of_or_within ISO (MGI:3835718|PMID:18604197) RGD PMID:18604197 MGI:3835718 NCBI chr 2:173,542,151...173,583,956
Ensembl chr 2:173,542,110...173,583,956
JBrowse link
G Itgb8 integrin subunit beta 8 involved_in ISO (PMID:24312400) RGD PMID:24312400 NCBI chr 6:140,124,997...140,208,254
Ensembl chr 6:140,127,203...140,208,476
JBrowse link
G Kantr KDM5C adjacent transcript acts_upstream_of_or_within ISO (MGI:5648760|PMID:26034286) RGD PMID:26034286 MGI:5648760 NCBI chr  X:21,402,717...21,430,663 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 acts_upstream_of_or_within ISO (MGI:3054495|PMID:15340049) RGD PMID:15340049 MGI:3054495 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Kdm2a lysine demethylase 2A acts_upstream_of_or_within ISO (MGI:5615026|PMID:25463925) RGD PMID:25463925 MGI:5615026 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787
JBrowse link
G Kdm4a lysine demethylase 4A involved_in ISO (PMID:25660547) RGD PMID:25660547 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Kdr kinase insert domain receptor involved_in ISO
IEA
(PMID:26879375)
GO_REF:0000107
RGD
Ensembl
PMID:26879375 GO_REF:0000107 NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 IMP
IDA
NQO1 RGD PMID:11439354 PMID:20026152 RGD:727319, RGD:6902900 NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862
JBrowse link
G Klf4 Kruppel like factor 4 involved_in ISO RNAcentral:URS00003768C5_9606 (PMID:22267480) RGD PMID:22267480 NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
JBrowse link
G Kpna7 karyopherin subunit alpha 7 acts_upstream_of_or_within ISO MGI:6108355 (MGI:5913752|PMID:20699224) RGD PMID:20699224 MGI:5913752 NCBI chr12:9,576,378...9,635,247
Ensembl chr12:9,576,378...9,612,833
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 acts_upstream_of_or_within ISO MGI:5810650 (MGI:5700289|PMID:22770845) RGD PMID:22770845 MGI:5700289 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(MGI:5659826|PMID:24255059)
Ensembl
RGD
PMID:24255059 GO_REF:0000107 MGI:5659826 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lgals9 galectin 9 involved_in ISO UniProtKB:Q8TDQ0 (PMID:23408620), (PMID:25578313)
(MGI:5491117|PMID:23408620)
RGD PMID:23408620 PMID:25578313 MGI:5491117 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
JBrowse link
G Lgmn legumain involved_in ISO
IEA
(PMID:21237226)
GO_REF:0000107
RGD
Ensembl
PMID:21237226 GO_REF:0000107 NCBI chr 6:121,544,048...121,582,495
Ensembl chr 6:121,544,053...121,582,480
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:6434720|PMID:31023188) RGD PMID:31023188 MGI:6434720 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp3 LDL receptor related protein 3 involved_in ISO (PMID:28340487) RGD PMID:28340487 NCBI chr 1:87,843,815...87,859,147
Ensembl chr 1:87,844,868...87,859,110
JBrowse link
G Mael maelstrom spermatogenic transposon silencer acts_upstream_of_or_within ISO MGI:3795667 (MGI:3813746|PMID:18694567) RGD PMID:18694567 MGI:3813746 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G Map2k2 mitogen activated protein kinase kinase 2 involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
JBrowse link
G Mapt microtubule-associated protein tau involved_in ISO
IEA
(PMID:23164821)
GO_REF:0000107
RGD
Ensembl
PMID:23164821 GO_REF:0000107 NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
JBrowse link
G Max MYC associated factor X IDA RGD PMID:7791753 RGD:2316831 NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 IDA Gfap RGD PMID:16881068 RGD:9588644 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554
JBrowse link
G Mdm2 MDM2 proto-oncogene IMP p53 RGD PMID:19850968 RGD:2317361 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in IMP
ISO
Bdnf
(PMID:23960241)
RGD PMID:23960241 PMID:19217433 RGD:11069822 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:3830899|PMID:16680724)
UniProt
RGD
PMID:16680724 GO_REF:0000024 MGI:3830899 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:3041135 (MGI:5529574|PMID:23994610) RGD PMID:23994610 MGI:5529574 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:10562313) RGD PMID:10562313 NCBI chr20:12,790,919...12,791,784
Ensembl chr20:12,790,902...12,799,504
JBrowse link
G Mir1 microRNA 1 acts_upstream_of_or_within ISO (MGI:5052204|PMID:21690310) RGD PMID:21690310 MGI:5052204 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir133a1 microRNA 133a-1 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr18:1,885,082...1,885,168 JBrowse link
G Mir134 microRNA 134 acts_upstream_of_or_within ISO (MGI:3822253|PMID:18806776) RGD PMID:18806776 MGI:3822253 NCBI chr 6:128,748,908...128,748,980 JBrowse link
G Mir135a microRNA 135a acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 7:26,611,990...26,612,089
Ensembl chr 7:26,611,990...26,612,089
JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within ISO (MGI:5574156|PMID:24349493) RGD PMID:24349493 MGI:5574156 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir154 microRNA 154 acts_upstream_of_or_within ISO (MGI:5705446|PMID:25959411) RGD PMID:25959411 MGI:5705446 NCBI chr 6:128,752,947...128,753,030
Ensembl chr 6:128,752,947...128,753,030
JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (MGI:5426073|PMID:22517757) RGD PMID:22517757 MGI:5426073 NCBI chr11:23,774,654...23,774,718
Ensembl chr11:23,774,654...23,774,718
JBrowse link
G Mir181b1 microRNA 181b-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir186 microRNA 186 acts_upstream_of_or_within ISO (MGI:5771621|PMID:26710318) RGD PMID:26710318 MGI:5771621 NCBI chr 2:246,582,806...246,582,891
Ensembl chr 2:246,582,806...246,582,891
JBrowse link
G Mir18a microRNA 18a acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446) RGD PMID:23152446 MGI:5461254 NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
JBrowse link
G Mir196a microRNA 196a acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502) RGD PMID:15105502 MGI:3042528 NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502) RGD PMID:15105502 MGI:3042528 NCBI chr 4:81,330,487...81,330,571 JBrowse link
G Mir196c microRNA 196c acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502) RGD PMID:15105502 MGI:3042528 NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
JBrowse link
G Mir1b microRNA 1b acts_upstream_of_or_within ISO (MGI:5052204|PMID:21690310) RGD PMID:21690310 MGI:5052204 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
G Mir204 microRNA 204 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Mir208b microRNA 208b acts_upstream_of_or_within ISO (MGI:4359539|PMID:19726871) RGD PMID:19726871 MGI:4359539 NCBI chr15:28,451,638...28,451,749
Ensembl chr15:28,451,638...28,451,749
JBrowse link
G Mir21 microRNA 21 acts_upstream_of_or_within ISO (MGI:5693365|PMID:19147652) RGD PMID:19147652 MGI:5693365 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609
JBrowse link
G Mir218-2 microRNA 218-2 acts_upstream_of_or_within ISO (MGI:5297649|PMID:20947829) RGD PMID:20947829 MGI:5297649 NCBI chr10:20,068,451...20,068,560
Ensembl chr10:20,068,451...20,068,560
JBrowse link
G Mir219a1 microRNA 219a-1 acts_upstream_of_or_within ISO (MGI:4439416|PMID:20223197) RGD PMID:20223197 MGI:4439416 NCBI chr20:4,829,687...4,829,796
Ensembl chr20:4,829,687...4,829,796
JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO MGI:1914438 (MGI:5013854|PMID:21628588), (MGI:5516374|PMID:24101522) RGD PMID:21628588 PMID:24101522 MGI:5013854 MGI:5516374 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:5604962|PMID:24824656) RGD PMID:24824656 MGI:5604962 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Mir296 microRNA 296 acts_upstream_of_or_within ISO (MGI:3822253|PMID:18806776) RGD PMID:18806776 MGI:3822253 NCBI chr 3:163,051,838...163,051,915
Ensembl chr 3:163,051,838...163,051,915
JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within ISO (MGI:5013521|PMID:21522133) RGD PMID:21522133 MGI:5013521 NCBI chr 4:59,650,608...59,650,695 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of_or_within ISO (MGI:5013521|PMID:21522133) RGD PMID:21522133 MGI:5013521 NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
JBrowse link
G Mir29b2 microRNA 29b-2 acts_upstream_of_or_within ISO (MGI:5013521|PMID:21522133) RGD PMID:21522133 MGI:5013521 NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
JBrowse link
G Mir301a microRNA 301a acts_upstream_of_or_within ISO (MGI:5426073|PMID:22517757) RGD PMID:22517757 MGI:5426073 NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (MGI:5013854|PMID:21628588) RGD PMID:21628588 MGI:5013854 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Mir320a microRNA 320a acts_upstream_of_or_within ISO (MGI:5447874|PMID:22925886) RGD PMID:22925886 MGI:5447874 NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473
JBrowse link
G Mir330 microRNA 330 acts_upstream_of_or_within ISO (MGI:5305371|PMID:21993888) RGD PMID:21993888 MGI:5305371 NCBI chr 1:78,833,178...78,833,274
Ensembl chr 1:78,833,178...78,833,274
JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within ISO (MGI:4440730|PMID:19895913) RGD PMID:19895913 MGI:4440730 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Mir34b microRNA 34b acts_upstream_of_or_within ISO MGI:3619365|MGI:3619407|MGI:3639505|MGI:3718803 (MGI:4440730|PMID:19895913), (MGI:5578416|PMID:24982181) RGD PMID:19895913 PMID:24982181 MGI:4440730 MGI:5578416 NCBI chr 8:51,410,244...51,410,327
Ensembl chr 8:51,410,244...51,410,327
JBrowse link
G Mir34c microRNA 34c acts_upstream_of_or_within ISO MGI:3619364|MGI:3619407|MGI:3639505|MGI:3718803 (MGI:5013854|PMID:21628588), (MGI:5578416|PMID:24982181) RGD PMID:21628588 PMID:24982181 MGI:5013854 MGI:5578416 NCBI chr 8:51,409,726...51,409,802
Ensembl chr 8:51,409,726...51,409,802
JBrowse link
G Mir370 microRNA 370 acts_upstream_of_or_within ISO (MGI:5477897|PMID:23399934) RGD PMID:23399934 MGI:5477897 NCBI chr 6:128,572,257...128,572,335
Ensembl chr 6:128,572,257...128,572,335
JBrowse link
G Mir411 microRNA 411 involved_in ISO (MGI:6159438|PMID:29606596) RGD PMID:29606596 MGI:6159438 NCBI chr 6:128,723,189...128,723,264
Ensembl chr 6:128,723,184...128,723,279
JBrowse link
G Mir449a microRNA 449a acts_upstream_of_or_within ISO MGI:3619364|MGI:3619365|MGI:3639505|MGI:3718803 (MGI:5578416|PMID:24982181) RGD PMID:24982181 MGI:5578416 NCBI chr 2:44,670,714...44,670,804
Ensembl chr 2:44,670,714...44,670,804
JBrowse link
G Mir449c microRNA 449c acts_upstream_of_or_within ISO MGI:3619364|MGI:3619365|MGI:3619407|MGI:3718803 (MGI:5578416|PMID:24982181) RGD PMID:24982181 MGI:5578416 NCBI chr 2:44,669,179...44,669,277
Ensembl chr 2:44,669,179...44,669,277
JBrowse link
G Mir489 microRNA 489 acts_upstream_of_or_within ISO (MGI:5312165|PMID:22358842) RGD PMID:22358842 MGI:5312165 NCBI chr 4:31,693,355...31,693,460
Ensembl chr 4:31,693,355...31,693,460
JBrowse link
G Mir494 microRNA 494 acts_upstream_of_or_within ISO (MGI:5302482|PMID:20837890) RGD PMID:20837890 MGI:5302482 NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
JBrowse link
G Mir541 microRNA 541 involved_in ISO (MGI:6159438|PMID:29606596) RGD PMID:29606596 MGI:6159438 NCBI chr 6:128,757,016...128,757,105
Ensembl chr 6:128,757,016...128,757,105
JBrowse link
G Mir675 microRNA 675 acts_upstream_of_or_within ISO (MGI:5566551|PMID:24532688) RGD PMID:24532688 MGI:5566551 NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:5551666 NCBI chr17:6,620,649...6,620,724
Ensembl chr17:6,620,649...6,620,724
JBrowse link
G Mirlet7a1 microRNA let-7a-1 acts_upstream_of_or_within ISO MGI:3619049 (MGI:4359358|PMID:18604195), (MGI:5461254|PMID:23152446) RGD PMID:18604195 PMID:23152446 MGI:4359358 MGI:5461254 NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (MGI:3794515|PMID:18317593), (MGI:3836843|PMID:19150989) RGD PMID:18317593 PMID:19150989 MGI:3794515 MGI:3836843 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in ISO (MGI:6201889|PMID:25049354) RGD PMID:25049354 MGI:6201889 NCBI chr 8:4,724,009...4,732,956
Ensembl chr 8:4,724,029...4,733,520
JBrowse link
G Morc1 MORC family CW-type zinc finger 1 involved_in ISO MGI:1857787 (MGI:5700272|PMID:26275923) RGD PMID:26275923 MGI:5700272 NCBI chr11:52,178,769...52,384,255
Ensembl chr11:52,178,769...52,384,255
JBrowse link
G Msr1 macrophage scavenger receptor 1 involved_in ISO (MGI:5902691|PMID:11240025) RGD PMID:11240025 MGI:5902691 NCBI chr16:52,717,775...52,802,890
Ensembl chr16:52,717,732...52,799,676
JBrowse link
G Musk muscle associated receptor tyrosine kinase IDA epsilon-acetylcholine receptor RGD PMID:15604144 RGD:2317103 NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
JBrowse link
G Myadm myeloid-associated differentiation marker involved_in ISO
IEA
(PMID:23264465)
GO_REF:0000107
RGD
Ensembl
PMID:23264465 GO_REF:0000107 NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP Adipor1 RGD PMID:23349663 RGD:7207857 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor involved_in ISO
IEA
(PMID:21796614)
GO_REF:0000107
RGD
Ensembl
PMID:21796614 GO_REF:0000107 NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
JBrowse link
G Myt1 myelin transcription factor 1 acts_upstream_of_or_within ISO (MGI:3763794|PMID:17928203) RGD PMID:17928203 MGI:3763794 NCBI chr 3:168,890,466...168,950,341
Ensembl chr 3:168,886,089...168,950,341
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 IMP transcript levels RGD PMID:19608741 RGD:5688288 NCBI chr10:46,999,536...47,142,294
Ensembl chr10:46,999,536...47,141,032
JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
JBrowse link
G Ndfip2 Nedd4 family interacting protein 2 involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr15:82,032,366...82,087,043
Ensembl chr15:82,032,366...82,086,317
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:26687115) RGD PMID:26687115 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nkx3-1 NK3 homeobox 1 involved_in ISO (PMID:17486276) RGD PMID:17486276 NCBI chr15:44,473,851...44,476,443
Ensembl chr15:44,473,851...44,476,441
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 IDA Mmp2 RGD PMID:12010125 RGD:633207 NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408
JBrowse link
G Noct nocturnin involved_in ISS
ISO
GO_REF:0000024
(MGI:4837993|PMID:20685873)
UniProt
RGD
PMID:20685873 GO_REF:0000024 MGI:4837993 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Nog noggin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5051994|PMID:21624478)
Ensembl
RGD
PMID:21624478 GO_REF:0000107 MGI:5051994 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P35228 (MGI:5319619|PMID:12085352)
UniProtKB:P29477 (PMID:12085352)
Ensembl
RGD
PMID:12085352 GO_REF:0000107 MGI:5319619 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Notch1 notch receptor 1 involved_in ISO (PMID:11306509) RGD PMID:11306509 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
JBrowse link
G Notch2 notch receptor 2 involved_in ISO
IEA
(PMID:11306509)
GO_REF:0000107
RGD
Ensembl
PMID:11306509 GO_REF:0000107 NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
JBrowse link
G Npm1 nucleophosmin 1 acts_upstream_of_or_within ISO MGI:98834 (MGI:3805393|PMID:18625840) RGD PMID:18625840 MGI:3805393 NCBI chr10:17,741,512...17,751,626
Ensembl chr10:17,739,941...17,751,645
JBrowse link
G Nr0b2 nuclear receptor subfamily 0, group B, member 2 involved_in ISO (PMID:19085950) RGD PMID:19085950 NCBI chr 5:145,779,294...145,782,609
Ensembl chr 5:145,779,294...145,782,609
JBrowse link
G Nr1h2 nuclear receptor subfamily 1, group H, member 2 IDA RGD PMID:7971966 RGD:61674 NCBI chr 1:95,041,967...95,047,377
Ensembl chr 1:95,041,967...95,047,377
JBrowse link
G Nrxn1 neurexin 1 involved_in ISO (PMID:26078884) RGD PMID:26078884 NCBI chr 6:3,177,788...4,323,848
Ensembl chr 6:3,177,897...4,322,710
JBrowse link
G Ocln occludin involved_in ISO (PMID:21415414)
(MGI:6368048|PMID:21415414)
RGD PMID:21415414 MGI:6368048 NCBI chr 2:31,657,217...31,707,466
Ensembl chr 2:31,657,220...31,764,150
JBrowse link
G Olfm1 olfactomedin 1 involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
JBrowse link
G Olr1 oxidized low density lipoprotein receptor 1 involved_in IMP PMID:28108289 BHF-UCL PMID:28108289 RGD:13464258 NCBI chr 4:162,926,436...162,949,057
Ensembl chr 4:162,926,439...162,948,523
JBrowse link
G Oprd1 opioid receptor, delta 1 involved_in ISO (PMID:24613828) RGD PMID:24613828 NCBI chr 5:144,306,188...144,340,960
Ensembl chr 5:144,306,188...144,340,960
JBrowse link
G Ovol2 ovo-like zinc finger 2 involved_in ISO (MGI:6284898|PMID:28455959) RGD PMID:28455959 MGI:6284898 NCBI chr 3:131,677,388...131,707,844
Ensembl chr 3:131,677,391...131,708,359
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
IEA
(PMID:22683601)
GO_REF:0000107
RGD
Ensembl
PMID:22683601 GO_REF:0000107 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 involved_in ISO
IBA
(PMID:23575687)
PMID:21873635
RGD PMID:23575687 PMID:21873635 RGD:13792537 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304
JBrowse link
G Parp14 poly (ADP-ribose) polymerase family, member 14 involved_in ISO
IBA
(PMID:27796300)
PMID:21873635
RGD PMID:27796300 PMID:21873635 RGD:13792537 NCBI chr11:64,902,848...64,934,916
Ensembl chr11:64,902,785...64,934,916
JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 involved_in ISO
IBA
(PMID:27796300)
PMID:21873635
RGD PMID:27796300 PMID:21873635 RGD:13792537 NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455
JBrowse link
G Pawr pro-apoptotic WT1 regulator involved_in IEA
ISO
GO_REF:0000107
(MGI:5648604|PMID:25472717)
Ensembl
RGD
PMID:25472717 GO_REF:0000107 MGI:5648604 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Pc pyruvate carboxylase involved_in ISO
IEA
(PMID:23861867)
GO_REF:0000107
RGD
Ensembl
PMID:23861867 GO_REF:0000107 NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380
JBrowse link
G Pdcd10 programmed cell death 10 involved_in ISO (PMID:23388056) RGD PMID:23388056 NCBI chr 2:160,303,465...160,346,086
Ensembl chr 2:160,303,449...160,346,018
JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO
IEA
(PMID:23554459), (PMID:25089138)
GO_REF:0000107
RGD
Ensembl
PMID:23554459 PMID:25089138 GO_REF:0000107 NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
JBrowse link
G Pgr progesterone receptor involved_in ISO
IEA
(PMID:21695196)
GO_REF:0000107
RGD
Ensembl
PMID:21695196 GO_REF:0000107 NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
G Pias3 protein inhibitor of activated STAT, 3 acts_upstream_of_or_within ISO (MGI:3836131|PMID:17442941) RGD PMID:17442941 MGI:3836131 NCBI chr 2:184,232,546...184,241,455
Ensembl chr 2:184,232,571...184,241,480
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:22952941)
GO_REF:0000024
Ensembl
RGD
Alzheimers_University_of_Toronto
PMID:22952941 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP PMID:24749734 ParkinsonsUK-UCL PMID:24749734 RGD:10047218 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta involved_in IGI PMID:28947594 BHF-UCL PMID:28947594 RGD:13524616 NCBI chr 5:160,094,952...160,142,962
Ensembl chr 5:160,094,952...160,120,930
JBrowse link
G Pink1 PTEN induced kinase 1 involved_in IMP
ISO
PMID:24475098
(MGI:5582017|PMID:24475098)
RGD PMID:24475098 PMID:24475098 MGI:5582017, RGD:10047288 NCBI chr 5:150,530,523...150,542,635
Ensembl chr 5:150,530,523...150,542,635
JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO
IDA
(MGI:5912601|PMID:26637123)
(PMID:26637123)
RGD PMID:26637123 PMID:26637123 MGI:5912601, RGD:11342276 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
JBrowse link
G Plag1 PLAG1 zinc finger involved_in ISO (MGI:5285167|PMID:19808959) RGD PMID:19808959 MGI:5285167 NCBI chr 5:16,902,057...16,956,727
Ensembl chr 5:16,905,394...16,913,647
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (MGI:5517729|PMID:23847051) RGD PMID:23847051 MGI:5517729 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Pou2f1 POU class 2 homeobox 1 involved_in IMP PMID:28108289 BHF-UCL PMID:28108289 RGD:13464258 NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363
JBrowse link
G Pou3f2 POU class 3 homeobox 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5449484|PMID:23069940)
Ensembl
RGD
PMID:23069940 GO_REF:0000107 MGI:5449484 NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
JBrowse link
G Pou4f1 POU class 4 homeobox 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:6158788|PMID:28594399)
Ensembl
RGD
PMID:28594399 GO_REF:0000107 MGI:6158788 NCBI chr15:81,255,566...81,260,057
Ensembl chr15:81,257,781...81,259,728
JBrowse link
G Pou5f1 POU class 5 homeobox 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5490149|PMID:23495099)
AgBase
RGD
PMID:23495099 GO_REF:0000024 MGI:5490149 NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma involved_in
acts_upstream_of_or_within
ISO UniProtKB:P01137 (PMID:28467929)
(MGI:6106785|PMID:28467929)
(MGI:5462034|PMID:21880694)
RGD PMID:21880694 PMID:28467929 MGI:5462034 MGI:6106785 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISO (MGI:5562625|PMID:24161931) RGD PMID:24161931 MGI:5562625 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO MGI:3605483|MGI:3605621 (MGI:5014435|PMID:21670299) RGD PMID:21670299 MGI:5014435 NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
JBrowse link
G Prdm4 PR/SET domain 4 involved_in IMP PMID:23048031 ParkinsonsUK-UCL PMID:23048031 RGD:10054084 NCBI chr 7:17,953,832...17,980,489
Ensembl chr 7:17,954,019...17,980,489
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO UniProtKB:Q8BRK8 (MGI:6148443|PMID:27430620) RGD PMID:27430620 MGI:6148443 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q5EG47 (MGI:6148443|PMID:27430620)
Ensembl
RGD
PMID:27430620 GO_REF:0000107 MGI:6148443 NCBI chr 5:119,807,992...119,879,987
Ensembl chr 5:119,813,226...119,879,543
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19725078), (PMID:22314364) RGD PMID:19725078 PMID:22314364 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Psen1 presenilin 1 involved_in ISO UniProtKB:P05067 (PMID:28008308), (PMID:29061364) RGD PMID:28008308 PMID:29061364 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Pth parathyroid hormone involved_in ISO (PMID:17696759) RGD PMID:17696759 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106)
(MGI:5562517|PMID:23871208), (MGI:5640942|PMID:23991106)
RGD PMID:23871208 PMID:23991106 MGI:5562517 MGI:5640942 NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
JBrowse link
G Ptrh2 peptidyl-tRNA hydrolase 2 involved_in ISO (PMID:15006356) RGD PMID:15006356 NCBI chr10:71,505,113...71,515,297
Ensembl chr10:71,504,956...71,515,398
JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISO (PMID:19451233) RGD PMID:19451233 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975
JBrowse link
G Rara retinoic acid receptor, alpha acts_upstream_of_or_within ISO MGI:109275 (MGI:3771251|PMID:18026104) RGD PMID:18026104 MGI:3771251 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:25100735)
(MGI:5607667|PMID:25100735)
Ensembl
RGD
PMID:25100735 GO_REF:0000107 MGI:5607667 NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
JBrowse link
G Rbl1 RB transcriptional corepressor like 1 acts_upstream_of_or_within ISO (PMID:25100735) RGD PMID:25100735 NCBI chr 3:145,806,160...145,869,434
Ensembl chr 3:145,807,095...145,869,330
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:25100735)
GO_REF:0000107
RGD
Ensembl
PMID:25100735 GO_REF:0000107 NCBI chr19:15,876,852...15,923,632
Ensembl chr19:15,876,853...15,923,572
JBrowse link
G Rbms3 RNA binding motif, single stranded interacting protein 3 involved_in ISO (PMID:28409548) RGD PMID:28409548 NCBI chr 8:116,308,360...117,625,730
Ensembl chr 8:116,309,882...117,625,423
JBrowse link
G Rcor1 REST corepressor 1 involved_in ISO (MGI:3580760|PMID:15907476) RGD PMID:15907476 MGI:3580760 NCBI chr 6:130,069,606...130,146,164
Ensembl chr 6:130,069,392...130,146,153
JBrowse link
G Rel REL proto-oncogene, NF-kB subunit involved_in ISO (PMID:22065573) RGD PMID:22065573 NCBI chr14:97,690,105...97,721,194
Ensembl chr14:97,695,161...97,720,892
JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
IEA
ISO
IMP
GO_REF:0000024
GO_REF:0000107
(MGI:1289984|PMID:9771705), (MGI:3580760|PMID:15907476), (MGI:6294387|PMID:11039732)
PMID:25108103
(PMID:20564196)
UniProt
Ensembl
RGD
PMID:9771705 PMID:11039732 PMID:15907476 PMID:20564196 PMID:25108103 GO_REF:0000024 GO_REF:0000107 MGI:1289984 MGI:3580760 MGI:6294387, RGD:14397584 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
JBrowse link
G RGD1559962 similar to High mobility group protein 2 (HMG-2) involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr 1:19,409,285...19,410,183
Ensembl chr 1:19,409,539...19,410,168
JBrowse link
G RGD1561694 similar to High mobility group protein 2 (HMG-2) involved_in ISS GO_REF:0000024 AgBase GO_REF:0000024 NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
JBrowse link
G Rnaseh2b ribonuclease H2, subunit B acts_upstream_of_or_within ISO MGI:4432164 (MGI:5435090|PMID:22802351) RGD PMID:22802351 MGI:5435090 NCBI chr15:36,541,200...36,592,016
Ensembl chr15:36,541,218...36,584,118
JBrowse link
G Robo1 roundabout guidance receptor 1 involved_in ISO (MGI:5913048|PMID:25691540) RGD PMID:25691540 MGI:5913048 NCBI chr11:10,580,863...11,621,672
Ensembl chr11:10,580,908...11,620,203
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) RGD PMID:29353861 MGI:6271078 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Ros1 ROS proto-oncogene 1 , receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:2450566 (MGI:2675865|PMID:12773415) RGD PMID:12773415 MGI:2675865 NCBI chr20:31,432,636...31,583,998
Ensembl chr20:31,432,637...31,583,865
JBrowse link
G Samd7 sterile alpha motif domain containing 7 involved_in ISO (MGI:5908328|PMID:23565263) RGD PMID:23565263 MGI:5908328 NCBI chr 2:112,624,942...112,639,549
Ensembl chr 2:112,624,942...112,639,549
JBrowse link
G Serpine1 serpin family E member 1 IMP caspase-3 RGD PMID:22659625 RGD:8547927 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Serpinf1 serpin family F member 1 IMP Hif1a RGD PMID:21922517 RGD:8554899 NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
JBrowse link
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,898,738...182,930,283
Ensembl chr 2:182,898,738...182,930,506
JBrowse link
G Setdb2 SET domain bifurcated histone lysine methyltransferase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:33,553,657...33,606,586
Ensembl chr15:33,453,952...33,606,470
JBrowse link
G Sfmbt2 Scm-like with four mbt domains 2 involved_in ISO (PMID:23385818) RGD PMID:23385818 NCBI chr17:67,934,296...68,128,905
Ensembl chr17:67,935,904...68,128,781
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3045799 (MGI:4429763|PMID:19850029)
(PMID:10980594)
Ensembl
RGD
PMID:10980594 PMID:19850029 GO_REF:0000107 MGI:4429763 NCBI chr16:68,575,763...68,613,905
Ensembl chr16:68,575,763...68,614,286
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 involved_in ISO (MGI:4835154|PMID:10980594) RGD PMID:10980594 MGI:4835154 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO (PMID:24854121) RGD PMID:24854121 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in IEA
ISO
GO_REF:0000107
(MGI:3611729|PMID:16396903)
Ensembl
RGD
PMID:16396903 GO_REF:0000107 MGI:3611729 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:17916362), (PMID:20203304)
(PMID:19479941), (PMID:20203304), (PMID:23296834)
RGD PMID:17916362 PMID:19479941 PMID:20203304 PMID:23296834 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Slc24a3 solute carrier family 24 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6104227|PMID:28602864)
Ensembl
RGD
PMID:28602864 GO_REF:0000107 MGI:6104227 NCBI chr 3:132,552,119...133,051,192
Ensembl chr 3:132,551,595...133,051,192
JBrowse link
G Slc2a10 solute carrier family 2 member 10 acts_upstream_of_or_within ISO (PMID:16550171) RGD PMID:16550171 NCBI chr 3:154,240,395...154,252,690
Ensembl chr 3:154,240,391...154,252,690
JBrowse link
G Slc35c2 solute carrier family 35 member C2 acts_upstream_of_or_within ISO (MGI:4849897|PMID:20837470) RGD PMID:20837470 MGI:4849897 NCBI chr 3:154,012,262...154,023,549
Ensembl chr 3:154,012,416...154,023,488
JBrowse link
G Slc7a5 solute carrier family 7 member 5 acts_upstream_of ISO (PMID:24038088) RGD PMID:24038088 NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
JBrowse link
G Slit2 slit guidance ligand 2 acts_upstream_of_or_within ISO MGI:1315202 (MGI:3819920|PMID:18829537) RGD PMID:18829537 MGI:3819920 NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
JBrowse link
G Slit3 slit guidance ligand 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1315205 (MGI:3819920|PMID:18829537)
Ensembl
RGD
PMID:18829537 GO_REF:0000107 MGI:3819920 NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
JBrowse link
G Smad2 SMAD family member 2 acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446) RGD PMID:23152446 MGI:5461254 NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876
JBrowse link
G Smo smoothened, frizzled class receptor involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3611729|PMID:16396903)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:16396903 GO_REF:0000024 GO_REF:0000107 MGI:3611729 NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
JBrowse link
G Snx12 sorting nexin 12 involved_in ISO (PMID:22709416) RGD PMID:22709416 NCBI chr  X:66,226,995...66,356,945
Ensembl chr  X:66,227,053...66,356,950
JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISO
ISS
(PMID:19808959)
(MGI:5285167|PMID:19808959)
GO_REF:0000024
RGD
UniProt
PMID:19808959 GO_REF:0000024 MGI:5285167 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2429649 (MGI:5524169|PMID:24218621) RGD PMID:24218621 MGI:5524169 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:29290617)
(MGI:6093262|PMID:28628103)
RGD PMID:28628103 PMID:29290617 MGI:6093262 NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 IMP Bcl2l11 RGD PMID:23737756 RGD:11039479 NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
JBrowse link
G Sry sex determining region Y acts_upstream_of_or_within ISO (MGI:3027475|PMID:11869290) RGD PMID:11869290 MGI:3027475
G Stc2 stanniocalcin 2 involved_in ISO (PMID:9753616) RGD PMID:9753616 NCBI chr10:16,251,046...16,260,815
Ensembl chr10:16,250,853...16,262,973
JBrowse link
G Stox1 storkhead box 1 involved_in ISO (PMID:22253775) RGD PMID:22253775 NCBI chr20:30,598,656...30,666,371
Ensembl chr20:30,598,168...30,666,939
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:18305152) RGD PMID:18305152 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO (MGI:4457239|PMID:18665841) RGD PMID:18665841 MGI:4457239 NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tcf4 transcription factor 4 acts_upstream_of_or_within ISO (MGI:4453908|PMID:20231428) RGD PMID:20231428 MGI:4453908 NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
JBrowse link
G Tcl1a Tcl1 family Akt coactivator A acts_upstream_of_or_within ISO (MGI:3759699|PMID:17938240) RGD PMID:17938240 MGI:3759699 NCBI chr 6:124,125,032...124,131,025
Ensembl chr 6:124,125,032...124,131,025
JBrowse link
G Terf2 telomeric repeat binding factor 2 involved_in ISO (PMID:11927518) RGD PMID:11927518 NCBI chr19:34,976,963...35,005,813
Ensembl chr19:34,977,471...35,005,819
JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO (PMID:11927518) RGD PMID:11927518 NCBI chr 1:29,637,213...29,659,509
Ensembl chr 1:29,637,506...29,659,561
JBrowse link
G Tfap4 transcription factor AP-4 involved_in ISO (MGI:3663964|PMID:16924111) RGD PMID:16924111 MGI:3663964 NCBI chr10:11,001,338...11,019,386
Ensembl chr10:11,002,911...11,019,386
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
RNAcentral:URS000024463E_9606 (PMID:19913496), (PMID:20067797), (PMID:22269326), (PMID:25163461), (PMID:26634652), (PMID:28467929), (PMID:29167509)
(PMID:29529050)
(MGI:5921830|PMID:26634652)
BHF-UCL
RGD
PMID:19913496 PMID:20067797 PMID:22269326 PMID:25163461 PMID:26634652 More... GO_REF:0000024 MGI:5921830 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO (PMID:25217442)
(MGI:5688835|PMID:21984612)
RGD PMID:21984612 PMID:25217442 MGI:5688835 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 involved_in ISO (MGI:5688831|PMID:22960625) RGD PMID:22960625 MGI:5688831 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
JBrowse link
G Tgif1 TGFB-induced factor homeobox 1 IMP tropoelastin RGD PMID:18441095 RGD:2317192 NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within ISO (PMID:23275542) RGD PMID:23275542 NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327
JBrowse link
G Tle5 TLE family member 5, transcriptional modulator involved_in ISO
IEA
(PMID:15006356)
GO_REF:0000107
RGD
Ensembl
PMID:15006356 GO_REF:0000107 NCBI chr 7:8,143,357...8,150,295
Ensembl chr 7:8,143,357...8,150,113
JBrowse link
G Tmf1 TATA element modulatory factor 1 acts_upstream_of_or_within ISO MGI:4867392 (MGI:5440392|PMID:22553199) RGD PMID:22553199 MGI:5440392 NCBI chr 4:129,759,952...129,785,705
Ensembl chr 4:129,763,114...129,785,629
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of
acts_upstream_of_or_within
involved_in
ISO (PMID:22499991)
(MGI:5763710|PMID:26427354)
(PMID:20164187), (PMID:31124343), (PMID:31824476)
UniProtKB:Q16539 (PMID:15345745), (PMID:22267480), (PMID:24299952), (PMID:26371161)
RGD PMID:15345745 PMID:20164187 PMID:22267480 PMID:22499991 PMID:24299952 More... MGI:5763710 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A IDA type 2 iodothyronine deiodinase in alpha tanycytes RGD PMID:20501675 RGD:5130988 NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO MGI:106184 (MGI:3805393|PMID:18625840) RGD PMID:18625840 MGI:3805393 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Tp53inp1 tumor protein p53 inducible nuclear protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5788610|PMID:26589288)
Ensembl
RGD
PMID:26589288 GO_REF:0000107 MGI:5788610 NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:24882218) RGD PMID:24882218 NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914
JBrowse link
G Ttbk1 tau tubulin kinase 1 involved_in ISO (PMID:19118186) RGD PMID:19118186 NCBI chr 9:14,493,166...14,538,372
Ensembl chr 9:14,493,389...14,535,774
JBrowse link
G Ucn urocortin IDA ghrelin
Pla2g6
RGD PMID:21540451 PMID:14563694 RGD:5490560, RGD:5508192 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950
JBrowse link
G Ucn2 urocortin 2 IMP Fshb RGD PMID:19193717 RGD:2317015 NCBI chr 8:109,637,624...109,639,173
Ensembl chr 8:109,638,285...109,639,172
JBrowse link
G Upk3b uroplakin 3B involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr12:20,629,491...20,638,193
Ensembl chr12:20,631,525...20,637,724
JBrowse link
G Vdr vitamin D receptor acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:28885847)
GO_REF:0000107
RGD
Ensembl
PMID:28885847 GO_REF:0000107 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
JBrowse link
G Vegfa vascular endothelial growth factor A involved_in
acts_upstream_of_or_within
ISO UniProtKB:Q9UDY2 (PMID:19148554), (PMID:28977001)
(MGI:5461755|PMID:22886301)
(PMID:22773844)
RGD PMID:19148554 PMID:22773844 PMID:22886301 PMID:28977001 MGI:5461755 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
JBrowse link
G Vegfb vascular endothelial growth factor B involved_in ISO (PMID:18259607) RGD PMID:18259607 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within
ISO (PMID:23338840)
MGI:2136645 (MGI:5429122|PMID:22627278)
RGD PMID:22627278 PMID:23338840 MGI:5429122 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) RGD PMID:26203154 MGI:5694519 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
G Wdr35 WD repeat domain 35 IMP
IDA
Bcl2, Bcl2l1
Gch1
RGD PMID:23289926 PMID:18671723 RGD:11553920, RGD:11553926 NCBI chr 6:31,771,315...31,831,450
Ensembl chr 6:31,771,360...31,831,029
JBrowse link
G Wnt4 Wnt family member 4 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:15317892)
(MGI:2178881|PMID:11948913)
GO_REF:0000107
RGD
Ensembl
PMID:11948913 PMID:15317892 GO_REF:0000107 MGI:2178881 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
JBrowse link
G Wnt8b Wnt family member 8B acts_upstream_of_or_within ISO MGI:4414945 (MGI:4413515|PMID:19890917) RGD PMID:19890917 MGI:4413515 NCBI chr 1:243,353,841...243,375,297
Ensembl chr 1:243,354,086...243,374,286
JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO (PMID:18776082) RGD PMID:18776082 NCBI chr19:35,346,826...35,471,251
Ensembl chr19:35,346,814...35,472,699
JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA
ISO
GO_REF:0000107
(PMID:18386220)
Ensembl
RGD
PMID:18386220 GO_REF:0000107 NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO (PMID:29403552) RGD PMID:29403552 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
JBrowse link
G Yy1 YY1 transcription factor involved_in ISO (PMID:22065573) RGD PMID:22065573 NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in ISO (MGI:5619432|PMID:23776228) RGD PMID:23776228 MGI:5619432 NCBI chr11:57,052,129...57,823,679
Ensembl chr11:57,072,880...57,510,210
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B acts_upstream_of_or_within ISO (MGI:5450776|PMID:23034280) RGD PMID:23034280 MGI:5450776 NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO (PMID:18178554)
(MGI:5486545|PMID:18178554)
RGD PMID:18178554 MGI:5486545 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zfp148 zinc finger protein 148 involved_in ISO (PMID:12771217) RGD PMID:12771217 NCBI chr11:67,276,455...67,385,803
Ensembl chr11:67,281,707...67,385,772
JBrowse link
G Zfp281 zinc finger protein 281 involved_in ISO (PMID:10448078), (PMID:12771217) RGD PMID:10448078 PMID:12771217 NCBI chr13:48,096,103...48,104,265
Ensembl chr13:48,037,286...48,104,888
JBrowse link
G Zfp503 zinc finger protein 503 involved_in ISO (PMID:20735826) RGD PMID:20735826 NCBI chr15:2,313,060...2,316,848
Ensembl chr15:2,313,060...2,316,848
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3789238|PMID:16079796), (MGI:5609934|PMID:23117660) RGD PMID:16079796 PMID:23117660 MGI:3789238 MGI:5609934 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) RGD PMID:21336257 NCBI chr 1:234,749,138...234,931,219
Ensembl chr 1:234,751,733...234,931,560
JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO
ISS
(PMID:26489465)
GO_REF:0000024
RGD
UniProt
PMID:26489465 GO_REF:0000024 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) RGD PMID:28297718 NCBI chr18:28,378,692...28,381,316
Ensembl chr18:28,378,692...28,381,316
JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D IMP RGD PMID:20805360 RGD:10042974 NCBI chr14:9,615,375...9,638,975
Ensembl chr14:9,615,479...9,633,786
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in ISO
ISS
(PMID:16126846), (PMID:28275056)
GO_REF:0000024
RGD
UniProt
PMID:16126846 PMID:28275056 GO_REF:0000024 NCBI chr 9:1,862,555...1,872,301
Ensembl chr 9:1,862,899...1,872,451
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:24726324) RGD PMID:24726324 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in IBA
ISO
PMID:21873635
(MGI:6105829|PMID:27616329)
(PMID:29180010)
RGD PMID:27616329 PMID:29180010 PMID:21873635 MGI:6105829, RGD:13792537 NCBI chr 5:166,805,309...166,813,339
Ensembl chr 5:166,804,837...166,813,155
JBrowse link
G Qk quaking acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) RGD PMID:20631256 MGI:5316962 NCBI chr 1:50,387,698...50,501,568
Ensembl chr 1:50,387,698...50,498,831
JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) RGD PMID:24375645 NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) RGD PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:28335005) RGD PMID:28335005 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) RGD PMID:23125361 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:24726324), (PMID:26255671) RGD PMID:24726324 PMID:26255671 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)
PMID:21873635
(PMID:19909337)
UniProt
RGD
PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 More... GO_REF:0000024 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631, RGD:13792537 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) RGD PMID:26134560 MGI:5707103 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233), (MGI:5795824|PMID:17288565)
(PMID:11719186), (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15687258), (PMID:15766526), (PMID:20221403), (PMID:27193233), (PMID:9703499)
UniProt
Ensembl
RGD
PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 More... GO_REF:0000024 GO_REF:0000107 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:4818820|PMID:20622884), (MGI:5779430|PMID:27102483), (MGI:5784967|PMID:24733888), (MGI:5784968|PMID:24700863), (MGI:5784976|PMID:22701344)
(PMID:12198173), (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:25014217), (PMID:25106868), (PMID:26542173)
UniProt
RGD
PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 More... GO_REF:0000024 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (PMID:25106868)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)
RGD PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angel2 angel homolog 2 involved_in ISO
IBA
(PMID:22547059)
PMID:21873635
RGD PMID:22547059 PMID:21873635 RGD:13792537 NCBI chr13:102,509,111...102,529,501
Ensembl chr13:102,510,589...102,529,493
JBrowse link
G Boll boule homolog, RNA binding protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:56,734,890...56,859,917
Ensembl chr 9:56,733,584...56,859,916
JBrowse link
G Dazl deleted in azoospermia-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,695,572...10,712,443
Ensembl chr 9:10,695,592...10,712,323
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6105829|PMID:27616329)
(PMID:14517288), (PMID:19029303), (PMID:26489465), (PMID:29180010)
UniProt
RGD
PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 GO_REF:0000024 MGI:6105829 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784
JBrowse link
G Elavl4 ELAV like RNA binding protein 4 involved_in ISO
ISS
(PMID:12034726)
GO_REF:0000024
RGD
UniProt
PMID:12034726 GO_REF:0000024 NCBI chr 5:125,056,848...125,200,543
Ensembl chr 5:125,056,848...125,200,446
JBrowse link
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) RGD PMID:12456657 MGI:5306322
G Hnrnpc heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) RGD PMID:16010978 NCBI chr15:24,779,593...24,809,213
Ensembl chr15:24,779,450...24,809,183
JBrowse link
G LOC681410 hypothetical protein LOC681410 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:6,507,413...6,509,373
Ensembl chr17:6,507,275...6,509,375
JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) RGD PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr13:42,513,762...42,560,061
Ensembl chr13:42,513,762...42,560,457
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IDA RGD PMID:11696543 RGD:10045987 NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
JBrowse link
G Rbm10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4367529|PMID:19508861)
Ensembl
RGD
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:1,540,399...1,572,571
Ensembl chr  X:1,540,398...1,572,575
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) RGD PMID:17050675 NCBI chr 3:161,801,550...161,814,381
Ensembl chr 3:161,801,577...161,814,381
JBrowse link
G Tardbp TAR DNA binding protein involved_in ISO (PMID:17481916) RGD PMID:17481916 NCBI chr 5:159,050,518...159,062,218
Ensembl chr 5:159,051,799...159,062,055
JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:15294994) RGD PMID:15294994 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS
(PMID:15014438)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15014438 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
conversion of ds siRNA to ss siRNA involved in RNA interference term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III involved_in ISO (PMID:19701182) RGD PMID:19701182 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr13:65,602,322...65,639,098
Ensembl chr13:65,602,323...65,639,069
JBrowse link
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISO
IBA
GO_REF:0000107
(PMID:19029303)
PMID:21873635
Ensembl
RGD
PMID:19029303 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) RGD PMID:19029303 NCBI chr10:80,908,300...80,951,097
Ensembl chr10:80,908,076...80,951,129
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO
IBA
(PMID:19029303)
PMID:21873635
RGD PMID:19029303 PMID:21873635 RGD:13792537 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Ybx1 Y box binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19029303)
UniProt
RGD
PMID:19029303 GO_REF:0000024 NCBI chr 5:132,882,137...132,899,108
Ensembl chr 5:132,882,145...132,898,862
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07066144.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Cnot7 CCR4-NOT transcription complex, subunit 7 acts_upstream_of_or_within ISO MGI:109382 (MGI:3807625|PMID:18625844) RGD PMID:18625844 MGI:3807625 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Dcp1a decapping mRNA 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
JBrowse link
G Dcp2 decapping mRNA 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Dcps decapping enzyme, scavenger involved_in IEA
IBA
GO_REF:0000104
PMID:21873635
UniProt PMID:21873635 GO_REF:0000104, RGD:13792537 NCBI chr 8:33,468,669...33,524,407 JBrowse link
G LOC103690064 m7GpppN-mRNA hydrolase-like involved_in IEA
IBA
GO_REF:0000002
PMID:21873635
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO MGI:1298230 (MGI:3807625|PMID:18625844) RGD PMID:18625844 MGI:3807625 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) RGD PMID:18625844 MGI:3807625 NCBI chr12:7,476,707...7,595,380
Ensembl chr12:7,476,697...7,599,204
JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO
IBA
ISS
(PMID:20584987), (PMID:20852261)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20584987 PMID:20852261 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:208,831,115...208,862,904
Ensembl chr 1:208,831,115...208,862,857
JBrowse link
G Patl2 PAT1 homolog 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:109,072,958...109,087,425
Ensembl chr 3:109,075,290...109,083,253
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dcp1a decapping mRNA 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:5,656,788...5,702,151
Ensembl chr16:5,656,773...5,702,140
JBrowse link
G Dcp1b decapping mRNA 1B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:152,358,267...152,395,747
Ensembl chr 4:152,358,241...152,397,145
JBrowse link
G Edc3 enhancer of mRNA decapping 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,106,129...58,151,685
Ensembl chr 8:58,106,175...58,151,671
JBrowse link
G Edc4 enhancer of mRNA decapping 4 involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr19:33,774,062...33,786,054
Ensembl chr19:33,774,055...33,787,758
JBrowse link
DNA methylation-dependent heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within ISO MGI:1261819 (MGI:3611125|PMID:16322236), (MGI:3768461|PMID:17938196) RGD PMID:16322236 PMID:17938196 MGI:3611125 MGI:3768461 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO MGI:1261827 (MGI:3768461|PMID:17938196) RGD PMID:17938196 MGI:3768461 NCBI chr 3:142,130,592...142,169,124
Ensembl chr 3:142,130,592...142,169,124
JBrowse link
G Hdac1 histone deacetylase 1 involved_in ISO UniProtKB:Q9UBB5 (PMID:23770133) RGD PMID:23770133 NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
JBrowse link
G Hells helicase, lymphoid specific involved_in IBA
ISO
PMID:21873635
(MGI:3573964|PMID:15647320)
RGD PMID:15647320 PMID:21873635 MGI:3573964, RGD:13792537 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Kmt2b lysine methyltransferase 2B acts_upstream_of_or_within ISO MGI:3056522|MGI:3623309 (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326
JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 involved_in ISO UniProtKB:Q13547 (PMID:23770133) RGD PMID:23770133 NCBI chr18:64,174,002...64,240,795
Ensembl chr18:64,174,002...64,240,794
JBrowse link
G Mbd3 methyl-CpG binding domain protein 3 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 7:9,312,961...9,320,166
Ensembl chr 7:9,313,098...9,320,165
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within ISO (MGI:3611125|PMID:16322236) RGD PMID:16322236 MGI:3611125 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in ISO
IEA
ISS
(PMID:20065043)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20065043 GO_REF:0000024 GO_REF:0000107 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO
IBA
(PMID:20065043), (PMID:21336257)
PMID:21873635
RGD PMID:20065043 PMID:21336257 PMID:21873635 RGD:13792537 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Cnot8 CCR4-NOT transcription complex, subunit 8 involved_in ISO
IBA
(PMID:20065043)
PMID:21873635
RGD PMID:20065043 PMID:21873635 RGD:13792537 NCBI chr10:42,281,614...42,294,740
Ensembl chr10:42,281,722...42,294,730
JBrowse link
G Exosc2 exosome component 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:14,962,930...14,973,645
Ensembl chr 3:14,962,917...14,973,575
JBrowse link
G Exosc3 exosome component 3 involved_in ISO
IBA
(PMID:11782436)
PMID:21873635
RGD PMID:11782436 PMID:21873635 RGD:13792537 NCBI chr 5:59,573,849...59,579,065
Ensembl chr 5:59,573,886...59,579,060
JBrowse link
G Exosc5 exosome component 5 involved_in ISO (PMID:11782436) RGD PMID:11782436 NCBI chr 1:81,168,128...81,177,266
Ensembl chr 1:81,166,023...81,177,265
JBrowse link
G Exosc7 exosome component 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:122,773,607...122,798,943
Ensembl chr 8:122,773,591...122,799,270
JBrowse link
G Exosc8 exosome component 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:138,930,405...138,937,009
Ensembl chr 2:138,930,405...138,936,928
JBrowse link
G Exosc9 exosome component 9 involved_in ISO
IBA
(PMID:11782436)
PMID:21873635
RGD PMID:11782436 PMID:21873635 RGD:13792537 NCBI chr 2:119,416,028...119,426,981
Ensembl chr 2:119,388,715...119,427,051
JBrowse link
gene silencing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in ISO (PMID:11559747) RGD PMID:11559747 NCBI chr19:51,238,153...51,246,433
Ensembl chr19:51,238,160...51,246,436
JBrowse link
G Dnmt1 DNA methyltransferase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:3687778|PMID:10615135)
Ensembl
RGD
PMID:10615135 GO_REF:0000107 MGI:3687778 NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
JBrowse link
G H1f0 H1.0 linker histone involved_in ISO UniProtKB:P09429 (PMID:19158276) RGD PMID:19158276 NCBI chr 7:110,592,834...110,594,694
Ensembl chr 7:110,592,208...110,594,694
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO UniProtKB:P07305 (PMID:19158276) RGD PMID:19158276 NCBI chr12:5,973,062...5,978,565 JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07002945.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 1:86,731,265...86,765,014 JBrowse link
G Ajuba ajuba LIM protein acts_upstream_of_or_within ISO (PMID:20616046) RGD PMID:20616046 NCBI chr15:28,019,775...28,031,537
Ensembl chr15:28,019,778...28,030,021
JBrowse link
G Cnot1 CCR4-NOT transcription complex, subunit 1 involved_in ISO (PMID:23172285), (PMID:24768540) RGD PMID:23172285 PMID:24768540 NCBI chr19:9,255,190...9,346,574
Ensembl chr19:9,255,194...9,346,574
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISS
ISO
GO_REF:0000024
(PMID:17507929)
UniProt
RGD
PMID:17507929 GO_REF:0000024 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Limd1 LIM domain containing 1 acts_upstream_of_or_within ISO (PMID:20616046) RGD PMID:20616046 NCBI chr 8:123,121,363...123,168,476
Ensembl chr 8:123,122,460...123,167,714
JBrowse link
G Mir1 microRNA 1 acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871), (MGI:5575655|PMID:17397913) RGD PMID:15361871 PMID:17397913 MGI:3510301 MGI:5575655 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir100 microRNA 100 acts_upstream_of_or_within ISO (MGI:4822296|PMID:20439489) RGD PMID:20439489 MGI:4822296 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within ISO (MGI:5013695|PMID:21415270) RGD PMID:21415270 MGI:5013695 NCBI chr 1:232,337,767...232,337,853
Ensembl chr 1:232,337,767...232,337,853
JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) RGD PMID:15361871 MGI:3510301 NCBI chr10:81,283,171...81,283,280
Ensembl chr10:81,283,171...81,283,280
JBrowse link
G Mir124-1 microRNA 124-1 acts_upstream_of_or_within ISO (MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657) RGD PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
JBrowse link
G Mir124-2 microRNA 124-2 acts_upstream_of_or_within ISO (MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657) RGD PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
JBrowse link
G Mir124-3 microRNA 124-3 acts_upstream_of_or_within ISO (MGI:3706460|PMID:17403776), (MGI:4438512|PMID:19898466), (MGI:5303045|PMID:21857657) RGD PMID:17403776 PMID:19898466 PMID:21857657 MGI:3706460 MGI:4438512 MGI:5303045 NCBI chr 3:168,014,952...168,015,038
Ensembl chr 3:168,014,952...168,015,038
JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (MGI:4438512|PMID:19898466) RGD PMID:19898466 MGI:4438512 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir125b1 microRNA 125b-1 involved_in ISO (MGI:5882697|PMID:28281528) RGD PMID:28281528 MGI:5882697 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
JBrowse link
G Mir125b2 microRNA 125b-2 involved_in ISO (MGI:5882697|PMID:28281528) RGD PMID:28281528 MGI:5882697 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir133a1 microRNA 133a-1 acts_upstream_of_or_within ISO MGI:3822152|MGI:3822154 (MGI:3820745|PMID:19015276) RGD PMID:19015276 MGI:3820745 NCBI chr18:1,885,082...1,885,168 JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within ISO (MGI:4822296|PMID:20439489) RGD PMID:20439489 MGI:4822296 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (MGI:4833768|PMID:20548288) RGD PMID:20548288 MGI:4833768 NCBI chr11:23,774,654...23,774,718
Ensembl chr11:23,774,654...23,774,718
JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO MGI:3790968 (MGI:5140688|PMID:21338882) RGD PMID:21338882 MGI:5140688 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
JBrowse link
G Mir183 microRNA 183 acts_upstream_of_or_within ISO (MGI:6108693|PMID:28819115) RGD PMID:28819115 MGI:6108693 NCBI chr 4:58,788,614...58,788,723
Ensembl chr 4:58,788,614...58,788,723
JBrowse link
G Mir196a microRNA 196a acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) RGD PMID:15361871 MGI:3510301 NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
JBrowse link
G Mir196c microRNA 196c acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) RGD PMID:15361871 MGI:3510301 NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
JBrowse link
G Mir1b microRNA 1b acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) RGD PMID:15361871 MGI:3510301 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
JBrowse link
G Mir200b microRNA 200b acts_upstream_of_or_within ISO (MGI:5013695|PMID:21415270) RGD PMID:21415270 MGI:5013695 NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (MGI:5514438|PMID:23974039) RGD PMID:23974039 MGI:5514438 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Mir21 microRNA 21 involved_in
acts_upstream_of_or_within
ISO (MGI:6208917|PMID:29925839)
(MGI:5693365|PMID:19147652)
RGD PMID:19147652 PMID:29925839 MGI:5693365 MGI:6208917 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within ISO MGI:3811186 (MGI:3811177|PMID:18278031) RGD PMID:18278031 MGI:3811177 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO (MGI:5516374|PMID:24101522) RGD PMID:24101522 MGI:5516374 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (MGI:5494382|PMID:22210897) RGD PMID:22210897 MGI:5494382 NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within ISO (MGI:5494382|PMID:22210897) RGD PMID:22210897 MGI:5494382 NCBI chr 9:75,976,596...75,976,680
Ensembl chr 9:75,976,596...75,976,680
JBrowse link
G Mir301a microRNA 301a acts_upstream_of_or_within ISO (MGI:5426073|PMID:22517757) RGD PMID:22517757 MGI:5426073 NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
JBrowse link
G Mir30a microRNA 30a acts_upstream_of_or_within ISO (MGI:3838679|PMID:19185580) RGD PMID:19185580 MGI:3838679 NCBI chr 9:25,737,600...25,737,670
Ensembl chr 9:25,737,600...25,737,670
JBrowse link
G Mir324 microRNA 324 acts_upstream_of_or_within ISO (MGI:5576401|PMID:24882011) RGD PMID:24882011 MGI:5576401 NCBI chr10:54,734,680...54,734,762
Ensembl chr10:54,734,678...54,734,766
JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within ISO (MGI:4822296|PMID:20439489), (MGI:5613071|PMID:25043055) RGD PMID:20439489 PMID:25043055 MGI:4822296 MGI:5613071 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
JBrowse link
G Mir3545 microRNA 3545 acts_upstream_of_or_within ISO (MGI:4946569|PMID:21307095) RGD PMID:21307095 MGI:4946569 NCBI chr 6:131,199,542...131,199,656
Ensembl chr 6:131,199,542...131,199,656
JBrowse link
G Mir423 microRNA 423 involved_in ISO (MGI:5922106|PMID:28411267) RGD PMID:28411267 MGI:5922106 NCBI chr10:61,914,142...61,914,220
Ensembl chr10:61,914,133...61,914,226
JBrowse link
G Mir489 microRNA 489 acts_upstream_of_or_within ISO (MGI:5312165|PMID:22358842) RGD PMID:22358842 MGI:5312165 NCBI chr 4:31,693,355...31,693,460
Ensembl chr 4:31,693,355...31,693,460
JBrowse link
G Mir494 microRNA 494 acts_upstream_of_or_within ISO (MGI:5302482|PMID:20837890) RGD PMID:20837890 MGI:5302482 NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO (MGI:4946569|PMID:21307095) RGD PMID:21307095 MGI:4946569 NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
JBrowse link
G Mir873 microRNA 873 acts_upstream_of_or_within ISO (MGI:6103206|PMID:28837808) RGD PMID:28837808 MGI:6103206 NCBI chr 5:51,356,919...51,356,995
Ensembl chr 5:51,356,919...51,356,995
JBrowse link
G Mir874 microRNA 874 acts_upstream_of_or_within ISO (MGI:5551666|PMID:24462679) RGD PMID:24462679 MGI:5551666 NCBI chr17:6,620,649...6,620,724
Ensembl chr17:6,620,649...6,620,724
JBrowse link
G Mir96 microRNA 96 acts_upstream_of_or_within ISO (MGI:6108693|PMID:28819115) RGD PMID:28819115 MGI:6108693 NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
JBrowse link
G Mirlet7a1 microRNA let-7a-1 acts_upstream_of_or_within ISO MGI:3619049 (MGI:4438512|PMID:19898466), (MGI:5461254|PMID:23152446) RGD PMID:19898466 PMID:23152446 MGI:4438512 MGI:5461254 NCBI chr17:16,113,766...16,113,859
Ensembl chr17:16,113,768...16,113,867
JBrowse link
G Mirlet7b microRNA let-7b acts_upstream_of_or_within ISO (MGI:5461254|PMID:23152446) RGD PMID:23152446 MGI:5461254 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
JBrowse link
G Mirlet7c1 microRNA let-7c-1 acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) RGD PMID:15361871 MGI:3510301 NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265
JBrowse link
G Mirlet7c2 microRNA let-7c-2 acts_upstream_of_or_within ISO (MGI:3510301|PMID:15361871) RGD PMID:15361871 MGI:3510301 NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:17507929) RGD PMID:17507929 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A involved_in IBA
ISO
PMID:21873635
(PMID:23172285)
RGD PMID:23172285 PMID:21873635 RGD:13792537 NCBI chr 1:177,561,898...177,715,669
Ensembl chr 1:177,646,030...177,715,660
JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790
JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO
IBA
UniProtKB:Q8SY33 (PMID:23172285)
PMID:21873635
RGD PMID:23172285 PMID:21873635 RGD:13792537 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194
JBrowse link
G Wtip WT1 interacting protein acts_upstream_of_or_within ISO (PMID:20616046) RGD PMID:20616046 NCBI chr 1:86,731,214...86,764,939 JBrowse link
gene silencing by RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5486537|PMID:19716330)
UniProt
RGD
PMID:19716330 GO_REF:0000024 MGI:5486537 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 4:46,400,485...46,456,085
Ensembl chr 4:46,400,485...46,456,085
JBrowse link
G Cnot10 CCR4-NOT transcription complex, subunit 10 involved_in IEA GO_REF:0000104
GO_REF:0000043
UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 8:114,280,486...114,330,110
Ensembl chr 8:114,280,490...114,330,107
JBrowse link
G Cnot11 CCR4-NOT transcription complex, subunit 11 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:41,814,923...41,824,626
Ensembl chr 9:41,814,907...41,824,620
JBrowse link
G Cnot6 CCR4-NOT transcription complex, subunit 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:33,978,785...34,031,025
Ensembl chr10:33,980,831...34,031,025
JBrowse link
G Cnot6l CCR4-NOT transcription complex, subunit 6-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:13,410,501...13,502,511
Ensembl chr14:13,411,281...13,498,203
JBrowse link
G Cnot7 CCR4-NOT transcription complex, subunit 7 involved_in ISO (MGI:5486537|PMID:19716330) RGD PMID:19716330 MGI:5486537 NCBI chr16:51,775,416...51,794,581
Ensembl chr16:51,775,412...51,794,576
JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:76,084,269...76,109,111
Ensembl chr 9:76,084,334...76,109,100
JBrowse link
G Ddx4 DEAD-box helicase 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Eri1 exoribonuclease 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
G Exd1 exonuclease 3'-5' domain containing 1 involved_in ISO (MGI:5751619|PMID:26669262) RGD PMID:26669262 MGI:5751619 NCBI chr 3:106,507,839...106,535,922
Ensembl chr 3:106,508,076...106,535,922
JBrowse link
G Fkbp6 FKBP prolyl isomerase family member 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:5439219|PMID:22902560)
UniProt
RGD
PMID:22902560 GO_REF:0000024 MGI:5439219 NCBI chr12:21,318,251...21,390,350
Ensembl chr12:21,319,568...21,390,350
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Mael maelstrom spermatogenic transposon silencer involved_in ISO (MGI:3813746|PMID:18694567) RGD PMID:18694567 MGI:3813746 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089
JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:68,821,026...68,829,863
Ensembl chr11:68,817,740...68,851,885
JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5486537|PMID:19716330)
UniProt
RGD
PMID:19716330 GO_REF:0000024 MGI:5486537 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 involved_in ISO (MGI:3709799|PMID:17446352), (MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463) RGD PMID:17446352 PMID:18381894 PMID:18922463 MGI:3709799 MGI:3778312 MGI:3815367 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3708051|PMID:17395546), (MGI:3778312|PMID:18381894), (MGI:3815367|PMID:18922463)
GO_REF:0000043
UniProt
RGD
PMID:17395546 PMID:18381894 PMID:18922463 GO_REF:0000024 GO_REF:0000043 MGI:3708051 MGI:3778312 MGI:3815367 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
G Snd1 staphylococcal nuclease and tudor domain containing 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:57,095,205...57,494,501
Ensembl chr 4:57,095,208...57,530,843
JBrowse link
G Tdrd1 tudor domain containing 1 involved_in ISO (MGI:4356231|PMID:19465913) RGD PMID:19465913 MGI:4356231 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd12 tudor domain containing 12 involved_in ISO (MGI:5516419|PMID:24067652) RGD PMID:24067652 MGI:5516419 NCBI chr 1:88,133,271...88,205,729
Ensembl chr 1:88,133,373...88,205,705
JBrowse link
G Tdrd9 tudor domain containing 9 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 6:131,029,644...131,145,076
Ensembl chr 6:131,029,652...131,144,651
JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) RGD PMID:19716330 NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790
JBrowse link
heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07027368.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr17:26,135,927...26,136,235 JBrowse link
G AABR07062859.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Bahd1 bromo adjacent homology domain containing 1 involved_in ISO (PMID:19666599) RGD PMID:19666599 NCBI chr 3:105,891,207...105,914,414
Ensembl chr 3:105,892,478...105,914,410
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A acts_upstream_of_or_within ISO (MGI:3653583|PMID:16678107), (MGI:4462332|PMID:20168299) RGD PMID:16678107 PMID:20168299 MGI:3653583 MGI:4462332 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Bmi1 BMI1 proto-oncogene, polycomb ring finger involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:81,332,175...81,341,625
Ensembl chr17:81,332,214...81,388,690
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21102443)
Ensembl
RGD
PMID:21102443 GO_REF:0000107 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Eed embryonic ectoderm development involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:143,867,875...143,895,008
Ensembl chr 1:143,867,875...143,894,974
JBrowse link
G Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit involved_in ISO (MGI:3820717|PMID:19026781) RGD PMID:19026781 MGI:3820717 NCBI chr10:86,126,023...86,162,001
Ensembl chr10:86,126,015...86,161,921
JBrowse link
G H2ab3 H2A.B variant histone 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:82,362,633...82,362,983
Ensembl chr  X:82,362,633...82,362,983
JBrowse link
G H2ac1 H2A clustered histone 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,171,384...41,171,776
Ensembl chr17:41,135,489...41,172,022
JBrowse link
G H2ac12 H2A clustered histone 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,486,315...42,486,880 JBrowse link
G H2ac20 H2A clustered histone 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,779,879...183,780,324 JBrowse link
G H2ac21 H2A clustered histone 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,779,385...183,779,777 JBrowse link
G H2ac4 H2A clustered histone 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,799,953...42,800,345
Ensembl chr17:42,799,652...42,800,381
JBrowse link
G H2aj H2A.J histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:169,675,718...169,676,202
Ensembl chr 4:169,675,752...169,677,006
JBrowse link
G H2ap H2A.P histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:12,907,962...12,908,516 JBrowse link
G H2ax H2A.X variant histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:44,671,927...44,673,257
Ensembl chr 8:44,671,786...44,673,239
JBrowse link
G H2az1 H2A.Z variant histone 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:226,355,769...226,357,878
Ensembl chr 2:226,355,708...226,358,485
JBrowse link
G H2az2 H2A.Z variant histone 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:81,293,299...81,312,209
Ensembl chr14:81,293,299...81,312,144
JBrowse link
G Hells helicase, lymphoid specific acts_upstream_of_or_within ISO MGI:2178586 (MGI:3510059|PMID:15448183) RGD PMID:15448183 MGI:3510059 NCBI chr 1:236,701,704...236,748,239
Ensembl chr 1:236,701,758...236,746,844
JBrowse link
G Hils1 histone linker H1 domain, spermatid-specific 1 involved_in ISO (PMID:12920187) RGD PMID:12920187 NCBI chr10:79,913,525...79,914,321
Ensembl chr10:79,913,480...79,914,321
JBrowse link
G Hist1h2ac histone cluster 1 H2A family member C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,478,803...42,484,078 JBrowse link
G Hist1h2af histone cluster 1 H2A family member F involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,379,404...41,379,796
Ensembl chr17:41,379,404...41,379,796
JBrowse link
G Hist1h2ah histone cluster 1 H2A family member H involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,384,521...41,385,018 JBrowse link
G Hist1h2ai histone cluster 1, H2ai involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,718,310...42,718,772 JBrowse link
G hist1h2ail2 histone cluster 1, H2ai-like2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,753,166...42,753,625 JBrowse link
G Hist1h2an histone cluster 1, H2an involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,534,653...41,535,259
Ensembl chr17:41,534,691...41,539,869
JBrowse link
G Hist1h2ao histone cluster 1, H2ao involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,704,740...42,705,130 JBrowse link
G Hist2h2aa2 histone cluster 2 H2A family member A2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,801,369...183,801,987 JBrowse link
G Hist2h2aa3 histone cluster 2 H2A family member A3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,808,398...183,808,922 JBrowse link
G Hist3h2a histone cluster 3, H2a involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:43,733,702...43,735,254
Ensembl chr10:43,733,668...43,744,874
JBrowse link
G Hmga2 high mobility group AT-hook 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:16901784)
UniProt
RGD
PMID:16901784 GO_REF:0000024 NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
JBrowse link
G Kdm1a lysine demethylase 1A involved_in ISO (MGI:4461095|PMID:20123967) RGD PMID:20123967 MGI:4461095 NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
JBrowse link
G Kmt2d lysine methyltransferase 2D involved_in ISO (MGI:4849597|PMID:20808952) RGD PMID:20808952 MGI:4849597 NCBI chr 7:129,980,744...130,022,088
Ensembl chr 7:129,962,887...130,020,325
JBrowse link
G LOC100362333 DNA-directed DNA polymerase epsilon 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:109,236,160...109,236,825
Ensembl chr 7:109,236,321...109,236,758
JBrowse link
G LOC100363125 rCG42854-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:12,905,312...12,905,916 JBrowse link
G LOC100910554 histone H2A type 1-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,696,845...42,697,423
Ensembl chr17:42,696,791...42,697,295
JBrowse link
G LOC103690190 histone H2A type 1-E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:42,707,863...42,708,420 JBrowse link
G LOC680063 similar to histone 2a involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC684773 similar to histone 2a involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:41,532,630...41,533,464 JBrowse link
G Macroh2a1 macroH2A.1 histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
JBrowse link
G Macroh2a2 macroH2A.2 histone involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
JBrowse link
G Mecp2 methyl CpG binding protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2137311 (MGI:3530434|PMID:15608638)
GO_REF:0000107
RGD
Ensembl
PMID:15608638 GO_REF:0000107 MGI:3530434 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689
JBrowse link
G Morf4l1 mortality factor 4 like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:90,642,988...90,664,518
Ensembl chr 8:90,642,988...90,664,519
JBrowse link
G Morf4l2 mortality factor 4 like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:100,082,562...100,093,658
Ensembl chr  X:100,082,404...100,093,728
JBrowse link
G Msl3 MSL complex subunit 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:25,638,029...25,655,698
Ensembl chr  X:25,637,804...25,655,697
JBrowse link
G Msl3l2 male-specific lethal 3-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:35,468,877...35,477,037
Ensembl chr20:35,468,888...35,477,757
JBrowse link
G Pcgf1 polycomb group ring finger 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:115,576,165...115,587,019
Ensembl chr 4:115,583,867...115,587,008
JBrowse link
G Pcgf2 polycomb group ring finger 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:82,682,563...82,694,563
Ensembl chr10:82,683,553...82,693,406
JBrowse link
G Pole3 DNA polymerase epsilon 3, accessory subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:75,973,941...75,977,175
Ensembl chr 5:75,974,717...75,977,231
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent, 1D involved_in ISO (MGI:5551345|PMID:24135283) RGD PMID:24135283 MGI:5551345 NCBI chr10:70,172,603...70,208,607
Ensembl chr10:70,172,603...70,208,607
JBrowse link
G RGD1562306 similar to H2A histone family, member Z involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:6,362,973...6,363,359 JBrowse link
G RGD1562871 similar to BMI1-like protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:73,506,495...73,507,638
Ensembl chr  X:73,506,495...73,507,638
JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:15469825) RGD PMID:15469825 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Tnp1 transition protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:11315969)
UniProt
RGD
PMID:11315969 GO_REF:0000024 NCBI chr 9:74,594,463...74,595,072
Ensembl chr 9:74,594,466...74,595,274
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO
IBA
(MGI:4431162|PMID:20080676)
PMID:21873635
RGD PMID:20080676 PMID:21873635 MGI:4431162, RGD:13792537 NCBI chr 9:13,982,427...14,062,315
Ensembl chr 9:13,982,329...14,062,139
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) RGD PMID:22192413 MGI:5305502 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422
JBrowse link
heterochromatin assembly by small RNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam172a family with sequence similarity 172, member A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:7,553,873...8,018,183
Ensembl chr 2:7,553,891...8,018,162
JBrowse link
G Nrde2 NRDE-2, necessary for RNA interference, domain containing involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:119,405,103...119,446,861
Ensembl chr 6:119,404,334...119,448,915
JBrowse link
G Znfx1 zinc finger, NFX1-type containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:155,764,073...155,791,777
Ensembl chr 3:155,764,980...155,821,242
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:16086026) RGD PMID:16086026 NCBI chr 8:53,828,741...53,932,773
Ensembl chr 8:53,831,093...53,932,437
JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Eri1 exoribonuclease 1 NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:18172165)
UniProt
RGD
PMID:18172165 GO_REF:0000024 NCBI chr16:56,724,101...56,744,228
Ensembl chr16:56,724,115...56,744,226
JBrowse link
G Exosc10 exosome component 10 involved_in ISO
IBA
(PMID:18172165)
PMID:21873635
RGD PMID:18172165 PMID:21873635 RGD:13792537 NCBI chr 5:158,995,318...159,018,946
Ensembl chr 5:158,995,313...159,018,940
JBrowse link
G Exosc4 exosome component 4 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 7:108,047,831...108,050,573
Ensembl chr 7:108,047,831...108,050,573
JBrowse link
G Lsm1 LSM1 homolog, mRNA degradation associated involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
JBrowse link
G Mtpap mitochondrial poly(A) polymerase involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:53,320,739...53,341,500
Ensembl chr17:53,320,741...53,341,538
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18172165)
UniProt
RGD
PMID:18172165 GO_REF:0000024 NCBI chr 2:24,380,135...24,432,099
Ensembl chr 2:24,380,225...24,432,099
JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr19:18,807,616...18,868,969
Ensembl chr19:18,807,525...18,869,537
JBrowse link
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:18172165)
UniProt
RGD
PMID:18172165 GO_REF:0000024 NCBI chr 1:205,848,691...205,859,767
Ensembl chr 1:205,848,772...205,859,764
JBrowse link
G Tut4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 5:123,201,723...123,306,582
Ensembl chr 5:123,203,003...123,306,465
JBrowse link
G Tut7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr17:4,849,287...4,903,542
Ensembl chr17:4,849,283...4,903,169
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:16086026) RGD PMID:16086026 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Xrn1 5'-3' exoribonuclease 1 involved_in ISO (PMID:18172165) RGD PMID:18172165 NCBI chr 8:96,527,871...96,637,385
Ensembl chr 8:96,528,195...96,632,739
JBrowse link
inactivation of X chromosome by heterochromatin assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (MGI:5532809|PMID:23754746) RGD PMID:23754746 MGI:5532809 NCBI chr 9:111,243,445...111,387,272
Ensembl chr 9:111,247,702...111,349,665
JBrowse link
inhibition of cysteine-type endopeptidase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cast calpastatin involved_in ISO
IBA
(PMID:2407243)
PMID:21873635
RGD PMID:2407243 PMID:21873635 RGD:13792537 NCBI chr 2:3,973,112...4,082,658
Ensembl chr 2:3,973,112...4,082,659
JBrowse link
G Cst7 cystatin F involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5910746 (MGI:5904382|PMID:28251676)
RGD PMID:28251676 PMID:21873635 MGI:5904382, RGD:13792537 NCBI chr 3:139,396,830...139,405,557
Ensembl chr 3:139,396,850...139,405,557
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in ISO (PMID:11821383) RGD PMID:11821383 NCBI chr10:55,838,381...55,904,374 JBrowse link
G Nol3 nucleolar protein 3 involved_in IDA
IMP
PMID:17292893
PMID:16639714
UniProt PMID:17292893 PMID:16639714 RGD:10047212, RGD:10047164 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
inhibition of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l12 BCL2 like 12 involved_in ISO (PMID:22262180) RGD PMID:22262180 NCBI chr 1:95,472,272...95,480,991
Ensembl chr 1:95,472,272...95,480,991
JBrowse link
G Fcmr Fc fragment of IgM receptor acts_upstream_of_or_within ISO (MGI:3576402|PMID:15632112) RGD PMID:15632112 MGI:3576402 NCBI chr13:42,337,363...42,351,706
Ensembl chr13:42,337,414...42,351,653
JBrowse link
G Nol3 nucleolar protein 3 involved_in ISO
IEA
(PMID:15509781)
GO_REF:0000107
RGD
Ensembl
PMID:15509781 GO_REF:0000107 NCBI chr19:33,154,061...33,158,250
Ensembl chr19:33,154,062...33,158,250
JBrowse link
G Xiap X-linked inhibitor of apoptosis involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2681362|PMID:14623868)
Ensembl
RGD
PMID:14623868 GO_REF:0000107 MGI:2681362 NCBI chr  X:120,890,537...120,938,413
Ensembl chr  X:120,897,907...120,934,700
JBrowse link
miRNA loading onto RISC involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase, RNA-specific acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23622242)
GO_REF:0000107
RGD
Ensembl
PMID:23622242 GO_REF:0000107 NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282
JBrowse link
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
IEA
(PMID:18178619), (PMID:19966796)
GO_REF:0000107
RGD
Ensembl
PMID:18178619 PMID:19966796 GO_REF:0000107 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:19966796) RGD PMID:19966796 NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Dicer1 dicer 1 ribonuclease III involved_in ISO (PMID:18178619) RGD PMID:18178619 NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:18178619) RGD PMID:18178619 NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
JBrowse link
miRNA mediated inhibition of translation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in IEA
ISS
ISO
GO_REF:0000104
GO_REF:0000024
(PMID:17671087), (PMID:18771919), (PMID:19801630)
UniProt
RGD
PMID:17671087 PMID:18771919 PMID:19801630 GO_REF:0000024 GO_REF:0000104 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in ISO
IEA
ISS
(PMID:17507929)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17507929 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (MGI:5465045|PMID:22751012) RGD PMID:22751012 MGI:5465045 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir143 microRNA 143 acts_upstream_of_or_within ISO (MGI:5289772|PMID:21441927) RGD PMID:21441927 MGI:5289772 NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
JBrowse link
G Mir186 microRNA 186 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) RGD PMID:32109384 MGI:6402838 NCBI chr 2:246,582,806...246,582,891
Ensembl chr 2:246,582,806...246,582,891
JBrowse link
G Mirlet7b microRNA let-7b acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) RGD PMID:32109384 MGI:6402838 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
JBrowse link
G Mirlet7g microRNA let-7g acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) RGD PMID:32109384 MGI:6402838 NCBI chr 8:106,822,293...106,822,380
Ensembl chr 8:106,822,280...106,822,388
JBrowse link
G Rbm4 RNA binding motif protein 4 involved_in ISO (PMID:19801630) RGD PMID:19801630 NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
JBrowse link
G Tnrc6a trinucleotide repeat containing adaptor 6A involved_in ISO (PMID:17671087) RGD PMID:17671087 NCBI chr 1:177,561,898...177,715,669
Ensembl chr 1:177,646,030...177,715,660
JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:112,252,351...112,469,829
Ensembl chr 7:112,252,359...112,461,790
JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:102,908,958...102,979,543
Ensembl chr10:102,868,828...102,978,194
JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISS
ISO
GO_REF:0000024
(MGI:5448492|PMID:22735451)
UniProt
RGD
PMID:22735451 GO_REF:0000024 MGI:5448492 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Zfp36 zinc finger protein 36 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5487524|PMID:21278420)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21278420 GO_REF:0000024 GO_REF:0000107 MGI:5487524 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde12 phosphodiesterase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:21245038), (PMID:21666256)
Ensembl
RGD
PMID:21245038 PMID:21666256 GO_REF:0000107 NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in IBA
ISO
PMID:21873635
(MGI:4881376|PMID:20691904)
(PMID:20691904)
RGD PMID:20691904 PMID:21873635 MGI:4881376, RGD:13792537 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19864255)
Ensembl
UniProt
RGD
PMID:19864255 GO_REF:0000024 GO_REF:0000107 NCBI chr20:30,378,542...30,399,076
Ensembl chr20:30,378,550...30,399,054
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC118772.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:68,067,119...68,089,948 JBrowse link
G Ago3 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 involved_in ISO (PMID:18771919) RGD PMID:18771919 NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Cnot10 CCR4-NOT transcription complex, subunit 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:114,280,486...114,330,110
Ensembl chr 8:114,280,490...114,330,107
JBrowse link
G Cnot11 CCR4-NOT transcription complex, subunit 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:41,814,923...41,824,626
Ensembl chr 9:41,814,907...41,824,620
JBrowse link
G Cnot9 CCR4-NOT transcription complex subunit 9 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 9:76,084,269...76,109,111
Ensembl chr 9:76,084,334...76,109,100
JBrowse link
G Dcp2 decapping mRNA 2 involved_in ISO (PMID:21070968), (PMID:28002401)
(MGI:4849882|PMID:21070968)
RGD PMID:21070968 PMID:28002401 MGI:4849882 NCBI chr18:36,750,732...36,787,067
Ensembl chr18:36,750,732...36,788,557
JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:87,355,409...87,736,616
Ensembl chr 9:87,356,457...87,736,616
JBrowse link
G Dxo decapping exoribonuclease involved_in ISO
ISS
(PMID:29601584)
(MGI:5488528|PMID:23523372), (MGI:6368104|PMID:28283058)
GO_REF:0000024
RGD
UniProt
PMID:23523372 PMID:28283058 PMID:29601584 GO_REF:0000024 MGI:5488528 MGI:6368104 NCBI chr20:3,993,322...3,995,484
Ensembl chr20:3,993,327...3,995,494
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in ISO
ISS
(PMID:10205060)
GO_REF:0000024
RGD
UniProt
PMID:10205060 GO_REF:0000024
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in ISO
ISS
(PMID:10205060)
GO_REF:0000024
RGD
UniProt
PMID:10205060 GO_REF:0000024 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
JBrowse link
G Khsrp KH-type splicing regulatory protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5439239|PMID:22844247)
Ensembl
RGD
PMID:22844247 GO_REF:0000107 MGI:5439239 NCBI chr 9:1,862,555...1,872,301
Ensembl chr 9:1,862,899...1,872,451
JBrowse link
G LOC108348108 heat shock 70 kDa protein 1A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr20:3,870,765...3,873,221 JBrowse link
G LOC688828 similar to Nucleoside diphosphate-linked moiety X motif 16 (Nudix motif 16) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:105,754,821...105,756,548
Ensembl chr 8:105,754,844...105,756,518
JBrowse link
G Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) RGD PMID:12515382 NCBI chr20:3,843,467...3,847,217
Ensembl chr20:3,843,466...3,847,266
JBrowse link
G Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) RGD PMID:12515382 NCBI chr 4:85,951,073...85,954,289
Ensembl chr 6:104,652,477...104,654,165
Ensembl chr 4:104,652,477...104,654,165
JBrowse link
G Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) RGD PMID:12515382 NCBI chr19:29,098,254...29,112,858
Ensembl chr19:29,098,214...29,118,682
JBrowse link
G Mettl14 methyltransferase like 14 involved_in ISO (MGI:5927282|PMID:28965759) RGD PMID:28965759 MGI:5927282 NCBI chr 2:211,530,598...211,546,858
Ensembl chr 2:211,530,602...211,546,821
JBrowse link
G Mettl16 methyltransferase like 16 involved_in ISO (MGI:6114846|PMID:29262316) RGD PMID:29262316 MGI:6114846 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
JBrowse link
G Mettl3 methyltransferase-like 3 involved_in ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) RGD PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
JBrowse link
G Mirlet7b microRNA let-7b acts_upstream_of_or_within ISO MGI:2676795|MGI:3619050 (MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:5439239 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270
JBrowse link
G Mirlet7c1 microRNA let-7c-1 acts_upstream_of_or_within ISO MGI:2676794|MGI:3619050 (MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:5439239 NCBI chr11:16,201,163...16,201,256
Ensembl chr11:16,201,158...16,201,265
JBrowse link
G Mirlet7c2 microRNA let-7c-2 acts_upstream_of_or_within ISO MGI:2676794|MGI:2676795 (MGI:5439239|PMID:22844247) RGD PMID:22844247 MGI:5439239 NCBI chr 7:116,803,771...116,803,865
Ensembl chr 7:116,803,771...116,803,865
JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (MGI:4431145|PMID:20133598) RGD PMID:20133598 MGI:4431145 NCBI chr 1:78,635,668...78,637,128
Ensembl chr 1:78,635,668...78,637,128
JBrowse link
G Nudt12 nudix hydrolase 12 involved_in ISO (MGI:6368680|PMID:31101919) RGD PMID:31101919 MGI:6368680 NCBI chr 9:98,741,627...98,755,039
Ensembl chr 9:98,742,360...98,755,039
JBrowse link
G Nudt16 nudix hydrolase 16 involved_in IBA
ISO
PMID:21873635
(MGI:4849882|PMID:21070968)
(PMID:21070968), (PMID:21337011)
RGD PMID:21070968 PMID:21337011 PMID:21873635 MGI:4849882, RGD:13792537 NCBI chr 8:105,739,927...105,741,982
Ensembl chr 8:105,739,623...105,741,998
JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 NOT|involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:10,636,174...10,638,090
Ensembl chr10:10,636,174...10,688,370
JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:12721301), (PMID:16055741) RGD PMID:12721301 PMID:16055741 NCBI chr14:102,877,553...102,908,696
Ensembl chr14:102,877,553...102,908,696
JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISS
ISO
GO_REF:0000024
(PMID:30930054)
UniProt
RGD
PMID:30930054 GO_REF:0000024 NCBI chr 7:65,691,429...65,705,257
Ensembl chr 7:65,691,435...65,705,716
JBrowse link
G Slfn14 schlafen family member 14 involved_in ISO (PMID:25996083)
(MGI:5705207|PMID:25996083)
RGD PMID:25996083 MGI:5705207 NCBI chr10:68,076,326...68,087,794 JBrowse link
G Ythdf2 YTH N(6)-methyladenosine RNA binding protein 2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673)
RGD PMID:27558897 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 More... MGI:6316439 MGI:6316688 MGI:6317061 NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5588370 (MGI:5567042|PMID:24415781)
RGD PMID:24415781 PMID:21873635 MGI:5567042, RGD:13792537 NCBI chr 1:2,313,110...2,348,820
Ensembl chr 1:2,314,324...2,348,819
JBrowse link
G Zfp36 zinc finger protein 36 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:10751406), (PMID:11782475)
(PMID:10330172), (PMID:20221403)
UniProt
RGD
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 GO_REF:0000024 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp36l1 zinc finger protein 36, C3H type-like 1 acts_upstream_of_or_within IDA PMID:10751406 MGI PMID:10751406 RGD:1580602 NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
JBrowse link
G Zfp36l2 zinc finger protein 36, C3H type-like 2 involved_in ISO (MGI:5320815|PMID:22367205) RGD PMID:22367205 MGI:5320815 NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (MGI:49288|PMID:1370712) RGD PMID:1370712 MGI:49288 NCBI chr 7:89,226,358...89,374,266
Ensembl chr 7:89,226,463...89,374,378
JBrowse link
mRNA cleavage involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago1 argonaute RISC component 1 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,722,111...138,757,118
Ensembl chr 5:138,722,111...138,773,546
JBrowse link
G Ago2 argonaute RISC catalytic component 2 involved_in ISO
ISS
IEA
(PMID:15260970), (PMID:17524464), (PMID:18771919)
(MGI:5616320|PMID:16357216)
GO_REF:0000024
GO_REF:0000104
RGD
UniProt
PMID:15260970 PMID:16357216 PMID:17524464 PMID:18771919 GO_REF:0000024 GO_REF:0000104 MGI:5616320 NCBI chr 7:105,018,202...105,105,120
Ensembl chr 7:105,029,120...105,104,974
JBrowse link
G Ago3 argonaute RISC catalytic component 3 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,632,367...138,714,230
Ensembl chr 5:138,639,569...138,714,230
JBrowse link
G Ago4 argonaute RISC component 4 NOT|involved_in ISO (PMID:15260970) RGD PMID:15260970 NCBI chr 5:138,780,450...138,825,889
Ensembl chr 5:138,783,069...138,825,632
JBrowse link
G Mir196a microRNA 196a acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) RGD PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr 7:134,110,400...134,110,509
Ensembl chr 7:134,110,400...134,110,509
JBrowse link
G Mir196b microRNA 196b acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502) RGD PMID:15105502 MGI:3042528 NCBI chr 4:81,330,487...81,330,571 JBrowse link
G Mir196c microRNA 196c acts_upstream_of_or_within ISO (MGI:3042528|PMID:15105502), (MGI:3510301|PMID:15361871) RGD PMID:15105502 PMID:15361871 MGI:3042528 MGI:3510301 NCBI chr10:81,231,006...81,231,085
Ensembl chr10:81,231,006...81,231,085
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:16289642) RGD PMID:16289642 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
mRNA cleavage involved in gene silencing by siRNA