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PMID:8872468 | PMID:10690375 | PMID:17611353 | PMID:19887619 | PMID:22301074 | PMID:24122022 | PMID:26156012 | PMID:26679809 | PMID:30032202 |
BRCA1 (Canis lupus familiaris - dog) |
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BRCA1 (Homo sapiens - human) |
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Brca1 (Mus musculus - house mouse) |
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Brca1 (Rattus norvegicus - Norway rat) |
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Brca1 (Chinchilla lanigera - long-tailed chinchilla) |
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BRCA1 (Pan paniscus - bonobo/pygmy chimpanzee) |
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Brca1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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BRCA1 (Sus scrofa - pig) |
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BRCA1 (Chlorocebus sabaeus - green monkey) |
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Brca1 (Heterocephalus glaber - naked mole-rat) |
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.
Variants in BRCA1
533 total Variants |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | reproductive system | respiratory system | adipose tissue | |
High | ||||||||||||
Medium | 8 | |||||||||||
Low | 3 | 1 | 10 | 6 | 6 | 1 | 9 | 5 | ||||
Below cutoff | 2 | 4 | 12 | 6 | 6 | 5 | 3 | 5 | 6 |
RefSeq Transcripts | NM_001013416 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_005624312 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005624313 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005624314 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_014116455 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_014116457 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_014116458 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_014116459 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022422510 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022422511 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022422512 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022422513 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022422514 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674909 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674910 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674912 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674913 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674914 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674915 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674916 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674917 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674918 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674919 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038674920 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_002629653 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005431678 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AAEX04000009 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AF159258 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AF250234 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AY136626 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAHUQ010000094 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAQRD010000103 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAUVH010000313 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
KM458140 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
REHQ01000009 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
U50709 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSCAFT00000023190 ⟹ ENSCAFP00000021534 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000043953 ⟹ ENSCAFP00000037946 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000065506 ⟹ ENSCAFP00000048759 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000069987 ⟹ ENSCAFP00000062284 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000070371 ⟹ ENSCAFP00000044212 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000071681 ⟹ ENSCAFP00000055065 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000076152 ⟹ ENSCAFP00000054724 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845010804 ⟹ ENSCAFP00845008432 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845010832 ⟹ ENSCAFP00845008453 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845010922 ⟹ ENSCAFP00845008522 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845010974 ⟹ ENSCAFP00845008565 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001013416 ⟹ NP_001013434 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_038674909 ⟹ XP_038530837 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674910 ⟹ XP_038530838 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674912 ⟹ XP_038530840 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674913 ⟹ XP_038530841 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674914 ⟹ XP_038530842 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674915 ⟹ XP_038530843 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674916 ⟹ XP_038530844 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674917 ⟹ XP_038530845 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674918 ⟹ XP_038530846 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674919 ⟹ XP_038530847 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038674920 ⟹ XP_038530848 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005431678 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001013434 | (Get FASTA) | NCBI Sequence Viewer |
XP_038530837 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530838 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530840 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530841 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530842 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530843 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530844 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530845 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530846 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530847 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038530848 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAC48663 | (Get FASTA) | NCBI Sequence Viewer |
AAD56289 | (Get FASTA) | NCBI Sequence Viewer | |
AAF66985 | (Get FASTA) | NCBI Sequence Viewer | |
AAN11299 | (Get FASTA) | NCBI Sequence Viewer | |
AIY53871 | (Get FASTA) | NCBI Sequence Viewer | |
AIY53872 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSCAFP00000021534.5 | ||
ENSCAFP00000044212.1 | |||
ENSCAFP00000048759.2 | |||
ENSCAFP00000062284.2 | |||
ENSCAFP00030003148.1 | |||
ENSCAFP00030003186.1 | |||
ENSCAFP00030003236.1 | |||
ENSCAFP00030003281.1 | |||
ENSCAFP00030003327.1 | |||
ENSCAFP00040031739.1 | |||
ENSCAFP00040031849.1 | |||
ENSCAFP00040031971.1 | |||
ENSCAFP00040032067.1 | |||
ENSCAFP00040032222.1 | |||
ENSCAFP00845008432 | |||
ENSCAFP00845008432.1 | |||
ENSCAFP00845008453 | |||
ENSCAFP00845008453.1 | |||
ENSCAFP00845008522.1 | |||
ENSCAFP00845008565.1 | |||
GenBank Protein | Q95153 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_001013434 ⟸ NM_001013416 |
- UniProtKB: | Q95153 (UniProtKB/Swiss-Prot), A0A8C0T715 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSCAFP00000044212 ⟸ ENSCAFT00000070371 |
RefSeq Acc Id: | ENSCAFP00000062284 ⟸ ENSCAFT00000069987 |
RefSeq Acc Id: | ENSCAFP00000037946 ⟸ ENSCAFT00000043953 |
RefSeq Acc Id: | ENSCAFP00000054724 ⟸ ENSCAFT00000076152 |
RefSeq Acc Id: | ENSCAFP00000021534 ⟸ ENSCAFT00000023190 |
RefSeq Acc Id: | ENSCAFP00000048759 ⟸ ENSCAFT00000065506 |
RefSeq Acc Id: | ENSCAFP00000055065 ⟸ ENSCAFT00000071681 |
RefSeq Acc Id: | XP_038530841 ⟸ XM_038674913 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0RAM3 (UniProtKB/TrEMBL), A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530843 ⟸ XM_038674915 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8C0RAP1 (UniProtKB/TrEMBL), A0A8I3N406 (UniProtKB/TrEMBL), A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530846 ⟸ XM_038674918 |
- Peptide Label: | isoform X5 |
- UniProtKB: | A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530837 ⟸ XM_038674909 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530838 ⟸ XM_038674910 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530847 ⟸ XM_038674919 |
- Peptide Label: | isoform X6 |
- UniProtKB: | A0A8C0T776 (UniProtKB/TrEMBL), A0A8I3MXX4 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530848 ⟸ XM_038674920 |
- Peptide Label: | isoform X7 |
- UniProtKB: | A0A8C0T776 (UniProtKB/TrEMBL), A0A8I3MXX4 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530842 ⟸ XM_038674914 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0RAM3 (UniProtKB/TrEMBL), A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530840 ⟸ XM_038674912 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0RAM3 (UniProtKB/TrEMBL), A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530845 ⟸ XM_038674917 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8C0RAP1 (UniProtKB/TrEMBL), A0A8I3N406 (UniProtKB/TrEMBL), A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038530844 ⟸ XM_038674916 |
- Peptide Label: | isoform X4 |
- UniProtKB: | A0A8C0RAP1 (UniProtKB/TrEMBL), A0A8I3N406 (UniProtKB/TrEMBL), A0A8C0T715 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSCAFP00845008453 ⟸ ENSCAFT00845010832 |
RefSeq Acc Id: | ENSCAFP00845008522 ⟸ ENSCAFT00845010922 |
RefSeq Acc Id: | ENSCAFP00845008565 ⟸ ENSCAFT00845010974 |
RefSeq Acc Id: | ENSCAFP00845008432 ⟸ ENSCAFT00845010804 |
Database | Acc Id | Source(s) |
Ensembl Genes | ENSCAFG00000014600 | Ensembl, UniProtKB/TrEMBL |
ENSCAFG00030001955 | UniProtKB/TrEMBL | |
ENSCAFG00040019657 | UniProtKB/TrEMBL | |
ENSCAFG00845006070 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSCAFT00000023190.6 | UniProtKB/TrEMBL |
ENSCAFT00000065506.2 | UniProtKB/TrEMBL | |
ENSCAFT00000069987.2 | UniProtKB/TrEMBL | |
ENSCAFT00000070371.2 | UniProtKB/TrEMBL | |
ENSCAFT00030003555.1 | UniProtKB/TrEMBL | |
ENSCAFT00030003597.1 | UniProtKB/TrEMBL | |
ENSCAFT00030003651.1 | UniProtKB/TrEMBL | |
ENSCAFT00030003698.1 | UniProtKB/TrEMBL | |
ENSCAFT00030003751.1 | UniProtKB/TrEMBL | |
ENSCAFT00040036450.1 | UniProtKB/TrEMBL | |
ENSCAFT00040036568.1 | UniProtKB/TrEMBL | |
ENSCAFT00040036705.1 | UniProtKB/TrEMBL | |
ENSCAFT00040036819.1 | UniProtKB/TrEMBL | |
ENSCAFT00040036995.1 | UniProtKB/TrEMBL | |
ENSCAFT00845010804 | ENTREZGENE | |
ENSCAFT00845010804.1 | UniProtKB/TrEMBL | |
ENSCAFT00845010832 | ENTREZGENE | |
ENSCAFT00845010832.1 | UniProtKB/TrEMBL | |
ENSCAFT00845010922.1 | UniProtKB/TrEMBL | |
ENSCAFT00845010974.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.30.40.10 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
3.40.50.10190 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | BRCA1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
BRCA1-associated | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
BRCA1_serine_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
BRCT_dom | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
BRCT_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_C3HC4_RING-type | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_RING | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_RING/FYVE/PHD | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_RING_CS | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
KEGG Report | cfa:403437 | UniProtKB/Swiss-Prot |
NCBI Gene | BRCA1 | ENTREZGENE |
PANTHER | BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PTHR13763 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Pfam | BRCT | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
BRCT_assoc | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
zf-C3HC4 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
PIRSF | BRCA1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PRINTS | BRSTCANCERI | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
PROSITE | BRCT | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ZF_RING_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
ZF_RING_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | BRCT | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
RING | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | RING/U-box | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF52113 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A0A0A1G434_CANLF | UniProtKB/TrEMBL |
A0A0A1G650_CANLF | UniProtKB/TrEMBL | |
A0A8C0LXT4_CANLF | UniProtKB/TrEMBL | |
A0A8C0LXW9_CANLF | UniProtKB/TrEMBL | |
A0A8C0M0X1_CANLF | UniProtKB/TrEMBL | |
A0A8C0RAM3 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8C0RAP1 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8C0T715 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8C0T776 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3MRE9_CANLF | UniProtKB/TrEMBL | |
A0A8I3MXX4 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3N406 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3NDJ5_CANLF | UniProtKB/TrEMBL | |
A0A8P0SJ84_CANLF | UniProtKB/TrEMBL | |
BRCA1_CANLF | UniProtKB/Swiss-Prot | |
Q6YK80_CANLF | UniProtKB/TrEMBL | |
Q95153 | ENTREZGENE | |
Q9TU33_CANLF | UniProtKB/TrEMBL | |
VGNC ID | VGNC:38516 | ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
---|---|---|---|---|---|---|---|
2019-04-16 | BRCA1 | BRCA1 DNA repair associated | BRCA1, DNA repair associated | Symbol and/or name change | 5135510 | APPROVED |