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Gene: Prdm14 (PR/SET domain 14) Rattus norvegicus
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Symbol: Prdm14
Name: PR/SET domain 14
RGD ID: 2319590
Description: Predicted to have RNA binding activity; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and chromatin DNA binding activity. Predicted to be involved in several processes, including histone H3-R26 methylation; inner cell mass cell fate commitment; and regulation of nucleobase-containing compound metabolic process. Predicted to localize to nucleoplasm. Orthologous to human PRDM14 (PR/SET domain 14); PARTICIPATES IN DNA modification pathway; INTERACTS WITH aflatoxin B1 (ortholog); all-trans-retinoic acid (ortholog); arsenite(3-) (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC100365184; PR domain 14; PR domain containing 14; PR domain containing 14-like; PR domain zinc finger protein 14
Orthologs:
Homo sapiens (human) : PRDM14 (PR/SET domain 14)  HGNC  Alliance
Mus musculus (house mouse) : Prdm14 (PR domain containing 14)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Prdm14 (PR/SET domain 14)
Pan paniscus (bonobo/pygmy chimpanzee) : PRDM14 (PR/SET domain 14)
Canis lupus familiaris (dog) : PRDM14 (PR/SET domain 14)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Prdm14 (PR/SET domain 14)
Sus scrofa (pig) : PRDM14 (PR/SET domain 14)
Chlorocebus sabaeus (African green monkey) : PRDM14 (PR/SET domain 14)
Heterocephalus glaber (naked mole-rat) : Prdm14 (PR/SET domain 14)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.055,710,076 - 5,730,560 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl55,710,392 - 5,730,560 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0510,550,222 - 10,570,255 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera55,665,056 - 5,674,368 (+)NCBICelera
Cytogenetic Map5q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Prdm14
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 2319590
Created: 2010-05-05
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.