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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.
Term:ovarian carcinoma
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Accession:DOID:4001 term browser browse the term
Definition:An ovarian cancer that has_material_basis_in epithelial tissue and is located_in the ovary. (DO)
Synonyms:narrow_synonym: undifferentiated ovarian carcinoma
 related_synonym: epithelial ovarian carcinoma
 primary_id: MESH:D000077216
 xref: EFO:0001075;   EFO:1000605;   NCI:C4908
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
ovarian carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABO ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr 9:49,746,749...49,758,317
Ensembl chr 9:49,748,693...49,758,479 		JBrowse link
G AGER advanced glycosylation end-product specific receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr12:1,574,251...1,577,410
Ensembl chr12:1,574,251...1,577,129 		JBrowse link
G AKT2 AKT serine/threonine kinase 2 ISO DNA:amplification (human) RGD PMID:16721043 RGD:2315603 NCBI chr 1:113,359,038...113,407,119
Ensembl chr 1:113,359,575...113,407,131 		JBrowse link
G AMH anti-Mullerian hormone treatment ISO RGD PMID:16533786 RGD:2315652 NCBI chr20:56,785,960...56,788,815 JBrowse link
G ATAD5 ATPase family AAA domain containing 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr 9:40,869,778...40,917,976
Ensembl chr 9:40,870,924...40,915,629 		JBrowse link
G ATM ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:10330348 PMID:10817650 PMID:16461462 PMID:17124347 PMID:23807571 More... NCBI chr 5:24,180,129...24,297,207
Ensembl chr 5:24,182,135...24,297,207 		JBrowse link
G BMP7 bone morphogenetic protein 7 ISO protein:increased expression:ovary RGD PMID:15277215 RGD:2289032 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:7894493 PMID:8808710 PMID:9150154 PMID:10227398 PMID:10389907 More... NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G CABIN1 calcineurin binding protein 1 ISO DNA:hypermethylation: : RGD PMID:18757082 RGD:10054392 NCBI chr26:28,366,264...28,517,570
Ensembl chr26:28,366,265...28,517,656 		JBrowse link
G CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 treatment ISO RGD PMID:26910918 RGD:18337281
G CASP6 caspase 6 ISO RGD PMID:17283169 RGD:2301336 NCBI chr32:29,897,706...29,910,522
Ensembl chr32:29,897,823...29,911,469 		JBrowse link
G CAV1 caveolin 1 ISO CTD Direct Evidence: marker/mechanism RGD
CTD		 PMID:11032026 PMID:35622184 RGD:2289113 NCBI chr14:55,458,934...55,494,563
Ensembl chr14:55,461,048...55,492,935 		JBrowse link
G CCN2 cellular communication network factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr 1:25,508,082...25,511,058
Ensembl chr 1:25,507,662...25,510,145 		JBrowse link
G CCND1 cyclin D1 treatment ISO RGD PMID:18025280 RGD:2296036 NCBI chr18:48,501,905...48,509,684
Ensembl chr18:48,501,899...48,516,005 		JBrowse link
G CCNE1 cyclin E1 ISO protein:increased expression:ovary RGD PMID:12713563 RGD:2289335 NCBI chr 1:121,688,622...121,697,533
Ensembl chr 1:121,688,796...121,697,649 		JBrowse link
G CCNG1 cyclin G1 ISO human cells in mouse model
mRNA:increased expression:ovary (human)		 RGD PMID:26872615 RGD:11555725 NCBI chr 4:47,800,697...47,808,259
Ensembl chr 4:47,801,575...47,808,211 		JBrowse link
G CCR5 C-C motif chemokine receptor 5 ISO protein:increased expression:peritoneal fluid, leukocyte (human) RGD PMID:11948121 RGD:4892092 NCBI chr20:42,293,288...42,297,952
Ensembl chr20:42,294,996...42,297,952 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:16199547 PMID:21876083 PMID:24713400 PMID:28492532 NCBI chr26:22,052,256...22,145,675
Ensembl chr26:21,427,961...22,240,624 		JBrowse link
G CLDN7 claudin 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21134740 NCBI chr 5:32,223,985...32,225,795
Ensembl chr 5:32,224,040...32,226,168 		JBrowse link
G CYP3A4 cytochrome P450, family 3, subfamily A, polypeptide 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:35622184 NCBI chr 6:9,836,685...9,869,520
Ensembl chr 6:9,777,659...9,869,352 		JBrowse link
G DUSP1 dual specificity phosphatase 1 disease_progression ISO RGD PMID:12432554 RGD:2298695 NCBI chr 4:39,588,833...39,591,065
Ensembl chr 4:39,588,339...39,590,514 		JBrowse link
G EDN1 endothelin 1 ISO mRNA, protein:increased expression:ovarian tumor (human) RGD PMID:9973223 RGD:4144954 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383 		JBrowse link
G EHMT2 euchromatic histone lysine methyltransferase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25115793 NCBI chr12:1,341,202...1,354,602
Ensembl chr12:1,341,191...1,354,584 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 9:22,760,373...22,785,367
Ensembl chr 9:22,759,256...22,785,294 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 8:48,330,856...48,334,273
Ensembl chr 8:48,331,026...48,333,467 		JBrowse link
G GLRA3 glycine receptor alpha 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr25:25,098,280...25,305,511
Ensembl chr25:25,131,250...25,305,027 		JBrowse link
G GPX6 glutathione peroxidase 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr35:25,620,843...25,630,288
Ensembl chr35:25,620,111...25,631,062 		JBrowse link
G HDAC3 histone deacetylase 3 disease_progression ISO RGD PMID:18714364 RGD:2306205 NCBI chr 2:36,583,283...36,598,121
Ensembl chr 2:36,583,283...36,597,682 		JBrowse link
G IL13 interleukin 13 ISO mRNA,protein:increased expression:tumor,ascites:mRNA increased relative to normal ovary, protein increased in tumor tissue/cancer ascites relative to normal ovary/ascites RGD PMID:14984938 RGD:2290344 NCBI chr11:20,957,870...20,961,391
Ensembl chr11:20,958,464...20,961,388 		JBrowse link
G KISS1 KiSS-1 metastasis suppressor disease_progression ISO RGD PMID:18005407 RGD:2302169 NCBI chr38:768,333...774,328
Ensembl chr38:768,585...773,382 		JBrowse link
G KLK13 kallikrein related peptidase 13 ISO mRNA:increased expression:ovary RGD PMID:19707197 RGD:2314862 NCBI chr 1:105,825,192...105,835,724
Ensembl chr 1:105,826,848...105,834,890 		JBrowse link
G KPNB1 karyopherin subunit beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 9:24,004,191...24,031,370
Ensembl chr 9:24,003,968...24,028,531 		JBrowse link
G L1CAM L1 cell adhesion molecule severity ISO protein:increased expression:ovary, serum (human)
human cells, mouse model		 RGD PMID:13678974 PMID:16424028 RGD:6483445 RGD:6483449 NCBI chr  X:121,708,695...121,722,819
Ensembl chr  X:121,708,894...121,733,365 		JBrowse link
G LETMD1 LETM1 domain containing 1 ISO mRNA, protein:increased expression:ovary RGD PMID:12879013 RGD:2314918 NCBI chr27:3,761,880...3,770,158
Ensembl chr27:3,761,203...3,770,103 		JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:12644821 RGD:2306053 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479 		JBrowse link
G MAP2K6 mitogen-activated protein kinase kinase 6 disease_progression ISO expression inhibits metastatic colonization of secondary sites by cancer cells in the SKOV3ip.1 cell line model system RGD PMID:16489030 RGD:2293338 NCBI chr 9:15,840,714...15,962,400
Ensembl chr 9:15,840,983...15,952,026 		JBrowse link
G MDH2 malate dehydrogenase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 6:7,389,266...7,405,311 JBrowse link
G MIR145 microRNA mir-145 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr 4:59,533,128...59,533,210
Ensembl chr 4:59,533,128...59,533,210 		JBrowse link
G MIR17 microRNA mir-17 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr22:42,478,013...42,478,071
Ensembl chr22:42,478,000...42,478,083 		JBrowse link
G MIR23B microRNA mir-23b treatment ISO human cells in mouse model RGD PMID:26872615 RGD:11555725 NCBI chr 1:71,678,353...71,678,406
Ensembl chr 1:71,678,346...71,678,416 		JBrowse link
G MIR98 microRNA mir-98 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr  X:45,253,693...45,253,772
Ensembl chr  X:45,253,696...45,253,775 		JBrowse link
G MMP13 matrix metallopeptidase 13 disease_progression ISO DNA:polymorphism:promoter RGD PMID:12974393 PMID:19258954 RGD:2306074 RGD:2306083 NCBI chr 5:28,793,568...28,864,832
Ensembl chr 5:28,850,522...28,864,121 		JBrowse link
G MSH6 mutS homolog 6 ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:18269114 PMID:20028993 PMID:24362816 PMID:25741868 PMID:26467025 More... NCBI chr10:49,825,330...49,838,036
Ensembl chr10:49,803,898...49,838,028 		JBrowse link
G MT-CYB mitochondrially encoded cytochrome b ISO DNA:polymorphisms, nonsense mutation RGD PMID:11507041 RGD:2298954 NCBI chr MT:14,183...15,322
Ensembl chr MT:14,183...15,322 		JBrowse link
G MTMR14 myotubularin related protein 14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr20:8,530,682...8,576,911
Ensembl chr20:8,530,711...8,576,913 		JBrowse link
G MTUS1 microtubule associated scaffold protein 1 ISO mRNA:decreased expression:ovarian carcinoma (human) RGD PMID:16270321 RGD:2317019 NCBI chr16:40,955,619...41,118,601
Ensembl chr16:40,957,574...41,068,967 		JBrowse link
G MUC16 mucin 16, cell surface associated ISO RGD PMID:20356397 RGD:2325203 NCBI chr20:51,790,036...51,876,801 JBrowse link
G MUTYH mutY DNA glycosylase ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:11818965 PMID:12606733 PMID:12917422 PMID:15036665 PMID:15635083 More... NCBI chr15:15,018,345...15,026,539
Ensembl chr15:14,906,543...15,026,539 		JBrowse link
G NBN nibrin ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:9590180 PMID:16415040 PMID:25741868 PMID:28492532 NCBI chr29:35,416,093...35,477,569
Ensembl chr29:35,416,093...35,477,563 		JBrowse link
G NCOA4 nuclear receptor coactivator 4 ISO mRNA:increased expression:ovary RGD PMID:11161850 RGD:2293537 NCBI chr28:1,801,655...1,867,705
Ensembl chr28:1,802,678...1,825,020 		JBrowse link
G NME2 non-metastatic cells 2, protein (NM23B) expressed in ISO RGD PMID:7907945 RGD:2299073 NCBI chr 9:27,002,114...27,005,740
Ensembl chr 9:27,001,733...27,015,934 		JBrowse link
G PAK1 p21 (RAC1) activated kinase 1 severity ISO protein:increased expression:ovary RGD PMID:17533742 RGD:2299164 NCBI chr21:21,341,530...21,409,535
Ensembl chr21:21,265,484...21,408,416 		JBrowse link
G PALB2 partner and localizer of BRCA2 ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:17200671 PMID:20927582 PMID:21165770 PMID:21365267 PMID:25741868 More... NCBI chr 6:22,209,711...22,237,798
Ensembl chr 6:22,209,384...22,237,745 		JBrowse link
G PHF21A PHD finger protein 21A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr18:43,300,426...43,493,956
Ensembl chr18:43,335,986...43,492,828 		JBrowse link
G PPP3CA protein phosphatase 3 catalytic subunit alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr32:22,688,141...22,996,693
Ensembl chr32:22,688,143...22,996,688 		JBrowse link
G PRKCA protein kinase C alpha severity ISO RGD PMID:12888898 RGD:2292460 NCBI chr 9:13,638,106...13,879,571
Ensembl chr 9:13,644,010...13,967,630 		JBrowse link
G PRKCI protein kinase C iota disease_progression ISO RGD PMID:12888898 RGD:2292460 NCBI chr34:34,767,066...34,839,823
Ensembl chr34:34,766,801...34,837,605 		JBrowse link
G PTK2 protein tyrosine kinase 2 ISO protein:increased tyrosine phosphorylation:ovary
protein:increased expression:ovary		 RGD PMID:10526262 PMID:15455382 RGD:2292563 RGD:2292572 NCBI chr13:35,302,439...35,541,336
Ensembl chr13:35,303,380...35,541,294 		JBrowse link
G RAD51D RAD51 paralog D ISO ClinVar Annotator: match by term: Ovarian carcinoma ClinVar PMID:16199547 PMID:21822267 PMID:25741868 PMID:26720727 PMID:26720728 More... NCBI chr 9:38,242,178...38,259,788
Ensembl chr 9:38,222,051...38,365,621 		JBrowse link
G RAF1 Raf-1 proto-oncogene, serine/threonine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr20:5,892,839...5,972,672
Ensembl chr20:5,892,834...5,972,090 		JBrowse link
G RHOA ras homolog family member A disease_progression ISO mRNA, protein:increased expression:ovary RGD PMID:12808121 RGD:2298873 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215 		JBrowse link
G RHOC ras homolog family member C ISO mRNA:increased expression:ovary RGD PMID:12808121 RGD:2298873 NCBI chr17:62,868,373...62,872,322 JBrowse link
G RSPO1 R-spondin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr15:4,857,887...4,876,077
Ensembl chr15:4,856,853...4,876,800 		JBrowse link
G SIX1 SIX homeobox 1 severity ISO mRNA:increased expression:female gonad (human) RGD PMID:17409410 RGD:11561962 NCBI chr 8:35,676,705...35,679,534
Ensembl chr 8:35,676,479...35,679,534 		JBrowse link
G SMAD2 SMAD family member 2 ISO RGD PMID:14985451 RGD:2299967 NCBI chr 7:43,696,883...43,778,063
Ensembl chr 7:43,700,445...43,769,983 		JBrowse link
G SOCS1 suppressor of cytokine signaling 1 ISO DNA:hypermethylation RGD PMID:15361843 RGD:2298907 NCBI chr 6:31,511,003...31,511,995
Ensembl chr 6:31,509,268...31,511,557 		JBrowse link
G SOCS2 suppressor of cytokine signaling 2 ISO DNA:hypermethylation RGD PMID:15361843 RGD:2298907 NCBI chr15:33,761,434...33,788,973
Ensembl chr15:33,785,545...33,877,869 		JBrowse link
G SOCS7 suppressor of cytokine signaling 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:30365097 NCBI chr 9:23,775,349...23,809,325
Ensembl chr 9:23,776,827...23,803,994 		JBrowse link
G STK11 serine/threonine kinase 11 susceptibility ISO DNA:loss of heterozygosity, missense mutation:p.P281L RGD PMID:10429654 RGD:2298556 NCBI chr20:57,558,966...57,579,163
Ensembl chr20:57,559,424...57,579,118 		JBrowse link
G STN1 STN1 subunit of CST complex ISO CTD Direct Evidence: marker/mechanism CTD PMID:28346442 NCBI chr28:16,203,607...16,246,468
Ensembl chr28:16,204,073...16,246,058 		JBrowse link
G SYNPO2 synaptopodin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr32:37,844,844...38,026,755
Ensembl chr32:37,812,903...38,024,489 		JBrowse link
G TFF1 trefoil factor 1 ISO RGD PMID:9066601 RGD:2292004 NCBI chr31:36,681,478...36,684,571
Ensembl chr31:36,681,357...36,695,665 		JBrowse link
G TIMP4 TIMP metallopeptidase inhibitor 4 disease_progression ISO protein:increased expression:ovary RGD PMID:17009974 RGD:2290414 NCBI chr20:6,399,522...6,405,089
Ensembl chr20:6,399,522...6,405,089 		JBrowse link
G TMT1B thiol methyltransferase 1B ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr10:89,319...91,610
Ensembl chr10:89,497...91,301 		JBrowse link
G TP53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25535366 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
G USP32 ubiquitin specific peptidase 32 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28811376 NCBI chr 9:36,092,232...36,310,231
Ensembl chr 9:36,102,641...36,308,278 		JBrowse link
G VEGFD vascular endothelial growth factor D disease_progression ISO RGD PMID:18343598 RGD:2315478 NCBI chr  X:11,590,097...11,627,199
Ensembl chr  X:11,590,089...11,626,486 		JBrowse link
G WNT4 Wnt family member 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25581431 NCBI chr 2:77,112,045...77,129,702
Ensembl chr 2:77,101,300...77,127,111 		JBrowse link
familiar ovarian carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAD51C RAD51 paralog C ISO ClinVar Annotator: match by term: Familial ovarian carcinoma ClinVar PMID:25741868 PMID:32165824 PMID:33832919 NCBI chr 9:33,289,675...33,347,411
Ensembl chr 9:33,289,742...33,326,405 		JBrowse link
ovarian clear cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A treatment ISO human cell in mouse model RGD PMID:21900401 RGD:126725086 NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
ovarian serous carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARHGEF10L Rho guanine nucleotide exchange factor 10 like susceptibility ISO DNA:SNP:intron:rs10788679(human) RGD PMID:29979793 RGD:14348955 NCBI chr 2:80,666,992...80,827,032
Ensembl chr 2:80,642,298...80,808,567 		JBrowse link
G CCNG1 cyclin G1 severity ISO mRNA, protein:increased expression:ovary (human) RGD PMID:30565428 RGD:151361205 NCBI chr 4:47,800,697...47,808,259
Ensembl chr 4:47,801,575...47,808,211 		JBrowse link
G MAP2K4 mitogen-activated protein kinase kinase 4 ISO ovarian serous carcinoma; DNA:loss of heterozygosity:tumor:24/28 (86%) of high-grade tumors, also decreased expression in 96/128 (75%) of tumors RGD PMID:16627982 RGD:2293332 NCBI chr 5:36,142,610...36,243,673
Ensembl chr 5:36,118,388...36,241,296 		JBrowse link
G NCAM1 neural cell adhesion molecule 1 disease_progression ISO RGD PMID:25455994 RGD:40907066 NCBI chr 5:19,895,587...20,192,334
Ensembl chr 5:19,895,613...20,191,995 		JBrowse link
G PTEN phosphatase and tensin homolog exacerbates ISO protein:increased expression:ovary, peritoneum (human) RGD PMID:26166715 RGD:11532228 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176 		JBrowse link
G WT1 WT1 transcription factor ISO RGD PMID:19856421 RGD:2315539 NCBI chr18:35,099,660...35,148,767
Ensembl chr18:35,103,934...35,148,000 		JBrowse link
ovarian serous cystadenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2M beta-2-microglobulin ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:26619011 NCBI chr30:11,331,574...11,337,991
Ensembl chr30:11,331,569...11,337,997 		JBrowse link
G BIRC3 baculoviral IAP repeat containing 3 exacerbates ISO mRNA:increased expression:ovary (human) RGD PMID:31964418 RGD:153344516 NCBI chr 5:29,324,893...29,343,322
Ensembl chr 5:29,325,331...29,337,240 		JBrowse link
G BRAF B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:24033266 PMID:24446311 PMID:25157968 PMID:25741868 PMID:26619011 More... NCBI chr16:8,222,909...8,318,179
Ensembl chr16:8,222,907...8,317,906 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:22908275 PMID:26619011 NCBI chr 9:22,760,373...22,785,367
Ensembl chr 9:22,759,256...22,785,294 		JBrowse link
G FBXW7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:25741868 PMID:26619011 NCBI chr15:50,187,579...50,417,188
Ensembl chr15:50,189,240...50,417,195 		JBrowse link
G HRAS HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr18:25,642,844...25,644,717
Ensembl chr18:25,642,844...25,644,717 		JBrowse link
G LRRC56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:11150980 PMID:16155195 PMID:16170316 PMID:16329078 PMID:16372351 More... NCBI chr18:25,647,024...25,662,646
Ensembl chr18:25,647,882...25,664,220 		JBrowse link
G NRAS NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:1654209 PMID:2278970 PMID:2674680 PMID:3122217 PMID:6587382 More... NCBI chr17:52,411,733...52,418,788
Ensembl chr17:52,411,733...52,418,788 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:15016963 PMID:15254419 PMID:15520168 PMID:15608678 PMID:15647370 More... NCBI chr34:12,600,140...12,681,905
Ensembl chr34:12,600,233...12,675,910 		JBrowse link
G PPP2R1A protein phosphatase 2 scaffold subunit Aalpha ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:25741868 PMID:26168268 PMID:26619011 PMID:28492532 PMID:31687265 More... NCBI chr 1:104,974,059...105,013,745
Ensembl chr 1:104,974,072...105,013,663 		JBrowse link
G TP53 tumor protein p53 ISO ClinVar Annotator: match by term: Ovarian serous cystadenocarcinoma ClinVar PMID:124622 PMID:253702 PMID:960674 PMID:1349175 PMID:1359493 More... NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
ovarian small cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO ClinVar Annotator: match by term: Small cell carcinoma of the ovary, hypercalcemic type ClinVar PMID:25741868 PMID:26467025 PMID:28492532 NCBI chr20:50,175,489...50,268,865
Ensembl chr20:50,175,687...50,268,836 		JBrowse link
G TP53 tumor protein p53 ISO ClinVar Annotator: match by term: Small cell carcinoma of the ovary, hypercalcemic type ClinVar NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
ovary adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCND3 cyclin D3 disease_progression ISO RGD PMID:17885491 RGD:2316011 NCBI chr12:10,593,786...10,688,304
Ensembl chr12:10,594,712...10,600,891 		JBrowse link
G CYP24A1 cytochrome P450 family 24 subfamily A member 1 ISO mRNA:increased expression:ovary (human) RGD PMID:16180015 RGD:151361183 NCBI chr24:39,861,018...39,878,161
Ensembl chr24:39,862,355...39,878,216 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Ovarian adenocarcinoma ClinVar PMID:15457249 PMID:18339846 NCBI chr 9:22,760,373...22,785,367
Ensembl chr 9:22,759,256...22,785,294 		JBrowse link
G PRAME PRAME nuclear receptor transcriptional regulator severity ISO mRNA, protein:increased expression:female gonad (human) RGD PMID:18709641 RGD:11535054 NCBI chr26:27,124,901...27,137,772
Ensembl chr26:27,124,902...27,136,112 		JBrowse link
ovary serous adenocarcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARID1A AT-rich interaction domain 1A ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar NCBI chr 2:73,331,606...73,401,151
Ensembl chr 2:73,324,852...73,401,102 		JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16084575 PMID:16455195 PMID:16949048 PMID:17100994 PMID:19656164 More... NCBI chr 9:19,958,941...20,025,494
Ensembl chr 9:19,958,391...20,025,494 		JBrowse link
G BRCA2 BRCA2 DNA repair associated ISO ClinVar Annotator: match by term: Ovarian serous surface papillary adenocarcinoma ClinVar PMID:16793542 PMID:18704680 PMID:25741868 NCBI chr25:7,734,450...7,797,851
Ensembl chr25:7,734,453...7,797,815 		JBrowse link
G BSG basigin ISO protein:increased expression:ovary RGD PMID:16633062 RGD:2289053 NCBI chr20:57,942,703...57,951,089
Ensembl chr20:57,943,276...57,951,061 		JBrowse link
G KRAS KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Primary low grade serous adenocarcinoma of ovary ClinVar PMID:2278970 PMID:3122217 PMID:7773929 PMID:8439212 PMID:12460918 More... NCBI chr27:22,261,753...22,296,704
Ensembl chr27:22,257,941...22,293,369 		JBrowse link
G TP53 tumor protein p53 ISO DNA, protein:loss of heterozygosity, increased expression:ovary RGD PMID:1310251 RGD:2290540 NCBI chr 5:32,561,406...32,565,149
Ensembl chr 5:32,560,598...32,574,109 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15603
    disease of cellular proliferation 7286
      cancer 5292
        cell type cancer 3646
          carcinoma 3100
            ovarian carcinoma 101
              familiar ovarian carcinoma 1
              ovarian clear cell carcinoma 1
              ovarian large-cell neuroendocrine carcinoma 0
              ovarian seromucinous carcinoma 0
              ovarian serous carcinoma 6
              ovarian small cell carcinoma + 2
              ovarian squamous cell carcinoma 0
              ovary adenocarcinoma + 19
              ovary papillary carcinoma 0
Path 2
Term Annotations click to browse term
  disease 15603
    disease of anatomical entity 15182
      Urogenital Diseases 4749
        Female Urogenital Diseases and Pregnancy Complications 2376
          Female Urogenital Diseases 1935
            female reproductive system disease 1932
              Adnexal Diseases 884
                ovarian disease 875
                  Ovarian Neoplasms 567
                    ovarian cancer 445
                      ovary epithelial cancer 124
                        malignant ovarian surface epithelial-stromal neoplasm 101
                          ovarian carcinoma 101
                            familiar ovarian carcinoma 1
                            ovarian clear cell carcinoma 1
                            ovarian large-cell neuroendocrine carcinoma 0
                            ovarian seromucinous carcinoma 0
                            ovarian serous carcinoma 6
                            ovarian small cell carcinoma + 2
                            ovarian squamous cell carcinoma 0
                            ovary adenocarcinoma + 19
                            ovary papillary carcinoma 0
paths to the root