Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | genetic disease | | ISO | SOCS2 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: Inborn genetic diseases | ClinVar | | |
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Imported Disease Annotations - ClinVarTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | genetic disease | | ISO | SOCS2 (Homo sapiens) | 8554872 | ClinVar Annotator: match by term: Inborn genetic diseases | ClinVar | | |
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SOCS2 (Canis lupus familiaris - dog) |
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SOCS2 (Homo sapiens - human) |
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Socs2 (Mus musculus - house mouse) |
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Socs2 (Rattus norvegicus - Norway rat) |
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Socs2 (Chinchilla lanigera - long-tailed chinchilla) |
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SOCS2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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Socs2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SOCS2 (Sus scrofa - pig) |
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SOCS2 (Chlorocebus sabaeus - green monkey) |
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Socs2 (Heterocephalus glaber - naked mole-rat) |
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Variants in SOCS2
300 total Variants |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | reproductive system | respiratory system | adipose tissue | |
High | ||||||||||||
Medium | 4 | 3 | 20 | 4 | 6 | 4 | 6 | 11 | 10 | 6 | ||
Low | 1 | 2 | 2 | 2 | 2 | 6 | 1 | |||||
Below cutoff | 8 |
RefSeq Transcripts | XM_003639533 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_005629223 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_005629225 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_014119723 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022403308 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022403310 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038496256 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038496257 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038496258 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038496259 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038558642 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038558643 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038558644 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038558645 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038622545 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038622546 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038622547 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038622548 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038622550 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038688229 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038688230 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038688231 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038688232 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AAEX04000015 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
DQ415457 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAHUQ010000165 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAQRD010000020 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAUVH010000372 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
REHQ01000015 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSCAFT00000009997 ⟹ ENSCAFP00000009276 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845037398 ⟹ ENSCAFP00845029296 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845037451 ⟹ ENSCAFP00845029340 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845037490 ⟹ ENSCAFP00845029373 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_003639533 ⟹ XP_003639581 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_005629225 ⟹ XP_005629282 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_014119723 ⟹ XP_013975198 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_022403310 ⟹ XP_022259018 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_038496256 ⟹ XP_038352184 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038496257 ⟹ XP_038352185 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038496258 ⟹ XP_038352186 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038496259 ⟹ XP_038352187 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038558642 ⟹ XP_038414570 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038558643 ⟹ XP_038414571 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038558644 ⟹ XP_038414572 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038558645 ⟹ XP_038414573 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038622545 ⟹ XP_038478473 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038622546 ⟹ XP_038478474 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038622547 ⟹ XP_038478475 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038622548 ⟹ XP_038478476 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038622550 ⟹ XP_038478478 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038688229 ⟹ XP_038544157 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038688230 ⟹ XP_038544158 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038688231 ⟹ XP_038544159 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038688232 ⟹ XP_038544160 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | XP_003639581 | (Get FASTA) | NCBI Sequence Viewer |
XP_005629282 | (Get FASTA) | NCBI Sequence Viewer | |
XP_013975198 | (Get FASTA) | NCBI Sequence Viewer | |
XP_022259018 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038352184 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038352185 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038352186 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038352187 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038414570 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038414571 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038414572 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038414573 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038478473 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038478474 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038478475 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038478476 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038478478 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038544157 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038544158 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038544159 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038544160 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | ABD72262 | (Get FASTA) | NCBI Sequence Viewer |
Ensembl Protein | ENSCAFP00000009276.5 | ||
ENSCAFP00000068278.1 | |||
ENSCAFP00030024640.1 | |||
ENSCAFP00845029296.1 | |||
ENSCAFP00845029340 | |||
ENSCAFP00845029340.1 | |||
ENSCAFP00845029373 | |||
ENSCAFP00845029373.1 |
RefSeq Acc Id: | XP_013975198 ⟸ XM_014119723 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_003639581 ⟸ XM_003639533 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_005629282 ⟸ XM_005629225 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_022259018 ⟸ XM_022403310 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSCAFP00000009276 ⟸ ENSCAFT00000009997 |
RefSeq Acc Id: | XP_038352185 ⟸ XM_038496257 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038352186 ⟸ XM_038496258 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038352184 ⟸ XM_038496256 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038352187 ⟸ XM_038496259 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038478478 ⟸ XM_038622550 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038478476 ⟸ XM_038622548 |
- Peptide Label: | isoform X3 |
RefSeq Acc Id: | XP_038478474 ⟸ XM_038622546 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038478475 ⟸ XM_038622547 |
- Peptide Label: | isoform X4 |
RefSeq Acc Id: | XP_038478473 ⟸ XM_038622545 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038544160 ⟸ XM_038688232 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038544159 ⟸ XM_038688231 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038544158 ⟸ XM_038688230 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8I3PG31 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038544157 ⟸ XM_038688229 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8I3S298 (UniProtKB/TrEMBL), A0A8C0NC88 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038414573 ⟸ XM_038558645 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038414572 ⟸ XM_038558644 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A8C0R6C2 (UniProtKB/TrEMBL), A0A8P0N8T6 (UniProtKB/TrEMBL), A0A8P0TJZ7 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038414571 ⟸ XM_038558643 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8I3PG31 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038414570 ⟸ XM_038558642 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0NC88 (UniProtKB/TrEMBL), A0A8I3S298 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSCAFP00845029340 ⟸ ENSCAFT00845037451 |
RefSeq Acc Id: | ENSCAFP00845029373 ⟸ ENSCAFT00845037490 |
RefSeq Acc Id: | ENSCAFP00845029296 ⟸ ENSCAFT00845037398 |
Database | Acc Id | Source(s) |
Ensembl Genes | ENSCAFG00000006180 | Ensembl, UniProtKB/TrEMBL |
ENSCAFG00030015321 | UniProtKB/TrEMBL | |
ENSCAFG00845021192 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSCAFT00000009997.5 | UniProtKB/TrEMBL |
ENSCAFT00000099724.1 | UniProtKB/TrEMBL | |
ENSCAFT00030028246.1 | UniProtKB/TrEMBL | |
ENSCAFT00845037398.1 | UniProtKB/TrEMBL | |
ENSCAFT00845037451 | ENTREZGENE | |
ENSCAFT00845037451.1 | UniProtKB/TrEMBL | |
ENSCAFT00845037490 | ENTREZGENE | |
ENSCAFT00845037490.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.30.505.10 | UniProtKB/TrEMBL |
SOCS box | UniProtKB/TrEMBL | |
InterPro | SH2 | UniProtKB/TrEMBL |
SH2_dom_sf | UniProtKB/TrEMBL | |
SOCS2 | UniProtKB/TrEMBL | |
SOCS2_SH2 | UniProtKB/TrEMBL | |
SOCS_box | UniProtKB/TrEMBL | |
SOCS_box-like_dom_sf | UniProtKB/TrEMBL | |
KEGG Report | cfa:100855737 | UniProtKB/TrEMBL |
NCBI Gene | SOCS2 | ENTREZGENE |
PANTHER | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT | UniProtKB/TrEMBL |
PTHR10155:SF7 | UniProtKB/TrEMBL | |
Pfam | SH2 | UniProtKB/TrEMBL |
SOCS_box | UniProtKB/TrEMBL | |
PRINTS | SH2DOMAIN | UniProtKB/TrEMBL |
PROSITE | SH2 | UniProtKB/TrEMBL |
SOCS | UniProtKB/TrEMBL | |
SMART | SH2 | UniProtKB/TrEMBL |
SOCS | UniProtKB/TrEMBL | |
SOCS_box | UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF158235 | UniProtKB/TrEMBL |
SSF55550 | UniProtKB/TrEMBL | |
UniProt | A0A8C0NC88 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8C0R6C2 | ENTREZGENE | |
A0A8I3PG31 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3PMB6_CANLF | UniProtKB/TrEMBL | |
A0A8I3S298 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8P0N8T6 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8P0TJZ7 | ENTREZGENE, UniProtKB/TrEMBL | |
VGNC ID | VGNC:46649 | ENTREZGENE |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2017-11-21 | SOCS2 | suppressor of cytokine signaling 2 | LOC102155396 | uncharacterized LOC102155396 | Data merged from RGD:12182828 | 737654 | PROVISIONAL |