MMP13 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 5 | 28,793,568 - 28,864,832 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 5 | 28,850,522 - 28,864,121 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 5 | 28,800,013 - 28,811,179 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 5 | 28,904,844 - 28,915,995 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 5 | 28,903,544 - 28,915,284 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 5 | 28,939,682 - 28,951,055 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 5 | 28,819,585 - 28,830,954 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 5 | 28,994,055 - 29,005,429 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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MMP13 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 102,942,995 - 102,955,732 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 102,942,995 - 102,955,732 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 102,813,724 - 102,826,461 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 102,318,934 - 102,331,672 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 11 | 102,318,933 - 102,331,672 | NCBI | | | | | Celera | 11 | 99,975,301 - 99,988,043 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q22.2 | NCBI | | | | | HuRef | 11 | 98,741,671 - 98,754,423 (-) | NCBI | | HuRef | | | CHM1_1 | 11 | 102,696,655 - 102,709,340 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 102,946,765 - 102,959,501 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Mmp13 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 9 | 7,272,514 - 7,283,333 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 7,272,514 - 7,283,331 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 7,272,514 - 7,283,333 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 7,272,514 - 7,283,331 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 7,272,514 - 7,283,333 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 7,272,545 - 7,283,331 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 4,675,357 - 4,686,177 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | A1 | NCBI | | | | | cM Map | 9 | 2.46 | NCBI | | | | |
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Mmp13 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 12,782,829 - 12,793,108 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 4,497,960 - 4,508,239 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 4,497,960 - 4,508,239 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 8,457,570 - 8,467,849 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 6,755,355 - 6,765,634 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 4,757,612 - 4,767,891 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 5,522,739 - 5,533,018 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 5,522,739 - 5,533,018 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 5,527,980 - 5,538,259 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 4,158,887 - 4,169,166 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 4,158,913 - 4,169,165 (+) | NCBI | | | | | Celera | 8 | 6,061,454 - 6,071,733 (+) | NCBI | | Celera | | | Cytogenetic Map | 8 | q11 | NCBI | | | | |
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Mmp13 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955412 | 6,106,994 - 6,118,760 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955412 | 6,106,994 - 6,118,760 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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MMP13 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 103,742,962 - 103,755,946 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 104,831,140 - 104,844,113 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 97,890,811 - 97,902,778 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 101,374,960 - 101,387,702 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 101,377,001 - 101,387,679 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Mmp13 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 86,490,310 - 86,496,608 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936551 | 5,040,084 - 5,050,384 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936551 | 5,040,084 - 5,050,384 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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MMP13 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 9 | 33,549,008 - 33,561,162 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 33,549,003 - 33,616,700 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 37,492,665 - 37,504,574 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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MMP13 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 94,322,473 - 94,370,665 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 94,322,979 - 94,334,747 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 31,533,765 - 31,547,392 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mmp13 (Heterocephalus glaber - naked mole-rat) |
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