Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Breast Neoplasms | | ISO | RAD51C (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20400964 and PMID:28825726 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Breast Neoplasms | | ISO | RAD51C (Homo sapiens) | 9068941 | CTD Direct Evidence: marker/mechanism | CTD | PMID:20400964 and PMID:28825726 | |
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RAD51C (Canis lupus familiaris - dog) |
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RAD51C (Homo sapiens - human) |
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Rad51c (Mus musculus - house mouse) |
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Rad51c (Rattus norvegicus - Norway rat) |
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Rad51c (Chinchilla lanigera - long-tailed chinchilla) |
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RAD51C (Pan paniscus - bonobo/pygmy chimpanzee) |
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Rad51c (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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RAD51C (Sus scrofa - pig) |
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RAD51C (Chlorocebus sabaeus - green monkey) |
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Rad51c (Heterocephalus glaber - naked mole-rat) |
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Variants in RAD51C
515 total Variants |
alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | reproductive system | respiratory system | adipose tissue | |
High | ||||||||||||
Medium | 1 | 1 | 8 | |||||||||
Low | 5 | 5 | 21 | 6 | 6 | 6 | 6 | 4 | 11 | 10 | 6 | |
Below cutoff | 2 |
RefSeq Transcripts | XM_014116710 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_014116711 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022423222 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_022423223 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038486115 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038486116 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038486117 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038486118 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038547927 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038547928 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038547929 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038547930 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038611890 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038611891 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038611892 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038611893 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038677128 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038677129 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038677130 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_038677131 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_002630042 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005330908 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005364602 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005399038 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XR_005432367 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AAEX04000009 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
JAAHUQ010000094 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAQRD010000103 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAAUVH010000313 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
REHQ01000009 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSCAFT00000027833 ⟹ ENSCAFP00000025883 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00000083543 ⟹ ENSCAFP00000055502 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSCAFT00845040803 ⟹ ENSCAFP00845031946 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_014116710 ⟹ XP_013972185 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_014116711 ⟹ XP_013972186 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_022423222 ⟹ XP_022278930 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_022423223 ⟹ XP_022278931 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_038486115 ⟹ XP_038342043 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038486116 ⟹ XP_038342044 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038486117 ⟹ XP_038342045 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038486118 ⟹ XP_038342046 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038547927 ⟹ XP_038403855 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038547928 ⟹ XP_038403856 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038547929 ⟹ XP_038403857 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038547930 ⟹ XP_038403858 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038611890 ⟹ XP_038467818 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038611891 ⟹ XP_038467819 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038611892 ⟹ XP_038467820 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038611893 ⟹ XP_038467821 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038677128 ⟹ XP_038533056 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038677129 ⟹ XP_038533057 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038677130 ⟹ XP_038533058 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_038677131 ⟹ XP_038533059 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_002630042 | ||||||||||||
Type: | NON-CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XR_005330908 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005364602 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005399038 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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RefSeq Acc Id: | XR_005432367 | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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Protein RefSeqs | XP_013972185 | (Get FASTA) | NCBI Sequence Viewer |
XP_013972186 | (Get FASTA) | NCBI Sequence Viewer | |
XP_022278930 | (Get FASTA) | NCBI Sequence Viewer | |
XP_022278931 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038342043 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038342044 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038342045 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038342046 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038403855 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038403856 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038403857 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038403858 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038467818 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038467819 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038467820 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038467821 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038533056 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038533057 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038533058 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038533059 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSCAFP00000025883.5 | ||
ENSCAFP00030010444.1 | |||
ENSCAFP00040001230.1 | |||
ENSCAFP00845031946 | |||
ENSCAFP00845031946.1 |
RefSeq Acc Id: | XP_013972186 ⟸ XM_014116711 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0PVY5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_013972185 ⟸ XM_014116710 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_022278931 ⟸ XM_022423223 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_022278930 ⟸ XM_022423222 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSCAFP00000055502 ⟸ ENSCAFT00000083543 |
RefSeq Acc Id: | ENSCAFP00000025883 ⟸ ENSCAFT00000027833 |
RefSeq Acc Id: | XP_038342046 ⟸ XM_038486118 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038342045 ⟸ XM_038486117 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038342044 ⟸ XM_038486116 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038342043 ⟸ XM_038486115 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038467821 ⟸ XM_038611893 |
- Peptide Label: | isoform X2 |
RefSeq Acc Id: | XP_038467820 ⟸ XM_038611892 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038467819 ⟸ XM_038611891 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038467818 ⟸ XM_038611890 |
- Peptide Label: | isoform X1 |
RefSeq Acc Id: | XP_038533059 ⟸ XM_038677131 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0PVY5 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038533058 ⟸ XM_038677130 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038533057 ⟸ XM_038677129 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038533056 ⟸ XM_038677128 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038403858 ⟸ XM_038547930 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A8C0PVY5 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038403857 ⟸ XM_038547929 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038403856 ⟸ XM_038547928 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038403855 ⟸ XM_038547927 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A8C0LR27 (UniProtKB/TrEMBL), A0A8C0PVY5 (UniProtKB/TrEMBL), A0A8I3PM42 (UniProtKB/TrEMBL), A0A8P0NJ31 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSCAFP00845031946 ⟸ ENSCAFT00845040803 |
RGD ID: | 13684619 | ||||||||
Promoter ID: | EPDNEW_C2686 | ||||||||
Type: | initiation region | ||||||||
Name: | RAD51C_1 | ||||||||
Description: | RAD51 paralog C | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
Ensembl Genes | ENSCAFG00000017560 | Ensembl, UniProtKB/TrEMBL |
ENSCAFG00030006417 | UniProtKB/TrEMBL | |
ENSCAFG00040000775 | UniProtKB/TrEMBL | |
ENSCAFG00845023093 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL | |
Ensembl Transcript | ENSCAFT00000027833.5 | UniProtKB/TrEMBL |
ENSCAFT00030011921.1 | UniProtKB/TrEMBL | |
ENSCAFT00040001439.1 | UniProtKB/TrEMBL | |
ENSCAFT00845040803 | ENTREZGENE | |
ENSCAFT00845040803.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | 3.40.50.300 | UniProtKB/TrEMBL |
InterPro | DNA_recomb/repair_Rad51_C | UniProtKB/TrEMBL |
DNA_recomb/repair_RecA-like | UniProtKB/TrEMBL | |
P-loop_NTPase | UniProtKB/TrEMBL | |
RecA_ATP-bd | UniProtKB/TrEMBL | |
KEGG Report | cfa:480573 | UniProtKB/TrEMBL |
NCBI Gene | RAD51C | ENTREZGENE |
PANTHER | DNA REPAIR PROTEIN RAD51 HOMOLOG 3 | UniProtKB/TrEMBL |
DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C | UniProtKB/TrEMBL | |
Pfam | Rad51 | UniProtKB/TrEMBL |
PIRSF | Rad51 | UniProtKB/TrEMBL |
PROSITE | RECA_2 | UniProtKB/TrEMBL |
Superfamily-SCOP | SSF52540 | UniProtKB/TrEMBL |
UniProt | A0A8C0LR27 | ENTREZGENE |
A0A8C0PVY5 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I3PM42 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8P0NJ31 | ENTREZGENE, UniProtKB/TrEMBL | |
VGNC ID | VGNC:45319 | ENTREZGENE |