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ONTOLOGY REPORT - ANNOTATIONS

Term:cell adhesion mediator activity
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Accession:GO:0098631 term browser browse the term
Definition:The binding by a cell-adhesion protein on a cell surface to an adhesion molecule on another cell surface or an external substrate, to mediate adhesion of the cell to the external substrate or to another cell.
Synonyms:exact_synonym: cell adhesion molecule;   protein binding involved in cell adhesion


show annotations for term's descendants           Sort by:
cell adhesion mediator activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntn2 contactin 2 enables ISO
IEA		 MGI:2181052 (PMID:18650339)
GO_REF:0000107		 RGD
Ensembl		 PMID:18650339 GO_REF:0000107 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887 		JBrowse link
G Lama5 laminin subunit alpha 5 enables ISO (PMID:15975931) RGD PMID:15975931 NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451 		JBrowse link
G Mip major intrinsic protein of lens fiber enables ISO
ISS		 (PMID:24120416)
GO_REF:0000024		 RGD
UniProt		 PMID:24120416 GO_REF:0000024 NCBI chr 7:643,502...653,121
Ensembl chr 7:647,315...654,400 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 enables ISO
IEA		 (PMID:21325282)
(PMID:21798896)
GO_REF:0000107		 RGD
Ensembl		 PMID:21325282 PMID:21798896 GO_REF:0000107 NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G Nectin3 nectin cell adhesion molecule 3 enables IEA
ISO		 GO_REF:0000107
(PMID:21798896)		 Ensembl
RGD		 PMID:21798896 GO_REF:0000107 NCBI chr11:54,362,712...54,469,351
Ensembl chr11:54,364,487...54,462,519 		JBrowse link
G Ninj1 ninjurin 1 enables ISO
IDA		 (PMID:33028854)
(PMID:24347169), (PMID:24917672)		 RGD PMID:24347169 PMID:24917672 PMID:33028854 PMID:33028854 RGD:126781729 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704 		JBrowse link
G Slamf1 signaling lymphocytic activation molecule family member 1 enables ISO (PMID:10972291) RGD PMID:10972291 NCBI chr13:84,270,316...84,305,497
Ensembl chr13:84,270,316...84,305,497 		JBrowse link
G Tmigd1 transmembrane and immunoglobulin domain containing 1 enables ISO (PMID:33129760) RGD PMID:33129760 NCBI chr10:61,739,071...61,751,025
Ensembl chr10:61,736,462...61,751,025 		JBrowse link
G Vcam1 vascular cell adhesion molecule 1 enables ISO (PMID:22970700) RGD PMID:22970700 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958 		JBrowse link
cadherin binding involved in cell-cell adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh9 cadherin 9 enables ISO UniProtKB:P70407 (PMID:21867881) RGD PMID:21867881 NCBI chr 2:66,280,422...66,367,121
Ensembl chr 2:66,228,117...66,367,121 		JBrowse link
G Epcam epithelial cell adhesion molecule enables IPI
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:19276185 GO_REF:0000033, RGD:9685062 NCBI chr 6:6,880,142...6,896,103
Ensembl chr 6:6,878,237...6,896,127 		JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha enables ISO (PMID:25468996) RGD PMID:25468996 NCBI chr 1:201,485,117...201,488,734
Ensembl chr 1:201,485,085...201,497,327 		JBrowse link
cell-cell adhesion mediator activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd200 Cd200 molecule enables IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:55,410,166...55,437,527
Ensembl chr11:55,410,196...55,501,648 		JBrowse link
G Cd200l1 CD200 molecule like 1 enables IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr11:55,350,433...55,401,528
Ensembl chr11:55,336,109...55,401,373 		JBrowse link
G Cd200l2 CD200 molecule like 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:55,279,853...55,326,753
Ensembl chr11:55,280,418...55,303,827 		JBrowse link
G Cd47 Cd47 molecule enables ISO UniProtKB:P78324 (PMID:11509594) RGD PMID:11509594 NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425 		JBrowse link
G Clstn3 calsyntenin 3 enables ISO
IEA
ISS		 (PMID:33101212)
(PMID:24094106), (PMID:32434929)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:24094106 PMID:32434929 PMID:33101212 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:157,331,494...157,364,769
Ensembl chr 4:157,331,494...157,364,769 		JBrowse link
G Cntn1 contactin 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541 		JBrowse link
G Cntn2 contactin 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887 		JBrowse link
G Cntn4 contactin 4 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090 		JBrowse link
G Cntn5 contactin 5 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:6,735,715...7,967,727
Ensembl chr 8:6,738,239...7,967,957 		JBrowse link
G Dscam DS cell adhesion molecule enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415 		JBrowse link
G Dscaml1 DS cell adhesion molecule-like 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:45,740,298...46,057,322
Ensembl chr 8:45,740,298...46,057,320 		JBrowse link
G Emb embigin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:49,070,509...49,125,042
Ensembl chr 2:49,069,087...49,125,050 		JBrowse link
G Esam endothelial cell adhesion molecule enables ISO
IBA		 (PMID:20298433)
GO_REF:0000033		 RGD
GO_Central		 PMID:20298433 GO_REF:0000033 NCBI chr 8:37,238,228...37,249,217
Ensembl chr 8:37,238,287...37,249,215 		JBrowse link
G Igsf9 immunoglobulin superfamily, member 9 enables ISO (PMID:24647940) RGD PMID:24647940 NCBI chr13:84,948,643...84,965,616
Ensembl chr13:84,948,619...84,965,607 		JBrowse link
G Jam3 junctional adhesion molecule 3 enables ISO
IBA
IEA		 (PMID:11823489), (PMID:19740376)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:11823489 PMID:19740376 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355 		JBrowse link
G Lrrc4c leucine rich repeat containing 4C enables ISO
IBA		 UniProtKB:Q9Y2I2 (PMID:23986473)
GO_REF:0000033		 RGD
GO_Central		 PMID:23986473 GO_REF:0000033 NCBI chr 3:82,305,495...83,684,039
Ensembl chr 3:83,483,851...83,687,774 		JBrowse link
G Myot myotilin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:36,705,244...36,724,849
Ensembl chr18:36,705,314...36,724,841 		JBrowse link
G Nexn nexilin (F actin binding protein) enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:241,186,783...241,218,315
Ensembl chr 2:241,186,790...241,218,342 		JBrowse link
G Nfasc neurofascin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880 		JBrowse link
G Ninj1 ninjurin 1 enables ISO (PMID:25766274) RGD PMID:25766274 NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704 		JBrowse link
G Nrcam neuronal cell adhesion molecule enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992 		JBrowse link
G Ntng1 netrin G1 enables ISO UniProtKB:Q9HCJ2 (PMID:23986473) RGD PMID:23986473 NCBI chr 2:197,462,785...197,827,681
Ensembl chr 2:197,463,945...197,826,997 		JBrowse link
G Plxnb3 plexin B3 enables ISO UniProtKB:Q9ULL4 (PMID:16122393) RGD PMID:16122393 NCBI chr  X:151,493,832...151,508,688
Ensembl chr  X:151,494,207...151,508,674 		JBrowse link
G Sirpa signal-regulatory protein alpha enables ISO UniProtKB:Q08722 (PMID:11509594) RGD PMID:11509594 NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098 		JBrowse link
G Tmigd1 transmembrane and immunoglobulin domain containing 1 enables ISO (PMID:26342724) RGD PMID:26342724 NCBI chr10:61,739,071...61,751,025
Ensembl chr10:61,736,462...61,751,025 		JBrowse link
collagen binding involved in cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga1 integrin subunit alpha 1 enables ISO (PMID:24823363) RGD PMID:24823363 NCBI chr 2:46,646,125...46,812,237
Ensembl chr 2:46,653,193...46,812,238 		JBrowse link
G Itga10 integrin subunit alpha 10 enables ISO (PMID:24823363) RGD PMID:24823363 NCBI chr 2:184,182,869...184,202,172
Ensembl chr 2:184,182,869...184,202,172 		JBrowse link
G Itga11 integrin subunit alpha 11 enables ISO (PMID:24823363) RGD PMID:24823363 NCBI chr 8:63,145,998...63,254,714
Ensembl chr 8:63,146,001...63,254,407 		JBrowse link
G Itga2 integrin subunit alpha 2 enables ISO (PMID:24823363) RGD PMID:24823363 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481 		JBrowse link
G Itgb1 integrin subunit beta 1 enables ISO
IBA		 (PMID:24823363)
GO_REF:0000033		 RGD
GO_Central		 PMID:24823363 GO_REF:0000033 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
integrin binding involved in cell-matrix adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emilin1 elastin microfibril interfacer 1 enables ISO (PMID:18463100) RGD PMID:18463100 NCBI chr 6:25,455,974...25,463,713
Ensembl chr 6:25,445,298...25,463,698 		JBrowse link
G Itga9 integrin subunit alpha 9 enables ISO (PMID:22654117) RGD PMID:22654117 NCBI chr 8:118,307,424...118,615,527
Ensembl chr 8:118,307,381...118,613,754 		JBrowse link
G Itgb1 integrin subunit beta 1 enables ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:22654117)		 UniProt
Ensembl
RGD		 PMID:22654117 GO_REF:0000024 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 enables ISO
IEA
IBA		 (PMID:23986478)
GO_REF:0000002
GO_REF:0000033		 RGD
InterPro
GO_Central		 PMID:23986478 GO_REF:0000002 GO_REF:0000033 NCBI chr 7:10,036,301...10,039,703
Ensembl chr 7:10,036,301...10,039,703 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 enables ISS
ISO
IEA		 GO_REF:0000024
(PMID:22654117)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:22654117 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:72,811,200...72,988,185
Ensembl chr 5:72,811,410...72,988,525 		JBrowse link
laminin receptor activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078 		JBrowse link
G Bcam basal cell adhesion molecule (Lutheran blood group) enables IEA
ISO
IBA		 GO_REF:0000107
(PMID:15975931), (PMID:16236823)
(PMID:10630290)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:10630290 PMID:15975931 PMID:16236823 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:79,415,016...79,429,403
Ensembl chr 1:79,415,017...79,429,403 		JBrowse link
G Rpsa ribosomal protein SA TAS RGD PMID:8076763 RGD:633045 NCBI chr 8:119,851,225...119,855,103
Ensembl chr 8:119,851,225...119,855,247 		JBrowse link
protein binding involved in heterotypic cell-cell adhesion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd200 Cd200 molecule enables IPI PMID:10981966 ARUK-UCL PMID:10981966 RGD:61663 NCBI chr11:55,410,166...55,437,527
Ensembl chr11:55,410,196...55,501,648 		JBrowse link
G Cd200r1 CD200 receptor 1 enables IPI PMID:10981966 ARUK-UCL PMID:10981966 RGD:61663 NCBI chr11:55,886,937...55,921,217
Ensembl chr11:55,887,717...55,921,285 		JBrowse link
G Cd47 Cd47 molecule enables IPI PMID:16055727 ARUK-UCL PMID:16055727 RGD:13792550 NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425 		JBrowse link
G Gldn gliomedin enables IEA
ISO		 GO_REF:0000107
MGI:104750|MGI:104753 (PMID:20188654)		 Ensembl
RGD		 PMID:20188654 GO_REF:0000107 NCBI chr 8:54,679,015...54,723,198
Ensembl chr 8:54,679,119...54,723,196 		JBrowse link
G Izumo1 izumo sperm-oocyte fusion 1 enables ISS
ISO
IBA		 GO_REF:0000024
(PMID:27309808), (PMID:35960805)
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:27309808 PMID:35960805 GO_REF:0000024 GO_REF:0000033 NCBI chr 1:96,090,817...96,096,893 JBrowse link
G Izumo1r IZUMO1 receptor, JUNO enables ISO (PMID:24739963) RGD PMID:24739963 NCBI chr 8:11,744,384...11,748,131
Ensembl chr 8:11,725,863...11,748,465 		JBrowse link
G Nfasc neurofascin enables ISO MGI:2388361 (PMID:20188654) RGD PMID:20188654 NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880 		JBrowse link
G Nrcam neuronal cell adhesion molecule enables IEA
ISO		 GO_REF:0000107
MGI:2388361 (PMID:20188654)		 Ensembl
RGD		 PMID:20188654 GO_REF:0000107 NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992 		JBrowse link
G Sirpa signal-regulatory protein alpha enables IPI PMID:16055727 ARUK-UCL PMID:16055727 RGD:13792550 NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20626
    binding 17717
      protein binding 14777
        cell adhesion molecule binding 297
          cell adhesion mediator activity 50
            cell adhesion receptor activity 0
            cell-cell adhesion mediator activity + 32
            cell-matrix adhesion mediator activity + 9
            laminin receptor activity 3
paths to the root