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Gene: Itga11 (integrin subunit alpha 11) Rattus norvegicus
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Symbol: Itga11
Name: integrin subunit alpha 11
Description: Predicted to have collagen binding activity involved in cell-matrix adhesion and collagen receptor activity. Predicted to be involved in several processes, including cell adhesion mediated by integrin; cell surface receptor signaling pathway; and substrate-dependent cell migration. Predicted to localize to focal adhesion and integrin alpha11-beta1 complex. Human ortholog(s) of this gene implicated in pancreatic cancer. Orthologous to human ITGA11 (integrin subunit alpha 11); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; INTERACTS WITH bisphenol A; diuron; endosulfan.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: integrin alpha-11; integrin, alpha 11; LOC315744
Orthologs:
Homo sapiens (human) : ITGA11 (integrin subunit alpha 11)  HGNC  Alliance
Mus musculus (house mouse) : Itga11 (integrin alpha 11)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Itga11 (integrin subunit alpha 11)
Pan paniscus (bonobo/pygmy chimpanzee) : ITGA11 (integrin subunit alpha 11)
Canis lupus familiaris (dog) : ITGA11 (integrin subunit alpha 11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Itga11 (integrin subunit alpha 11)
Sus scrofa (pig) : ITGA11 (integrin subunit alpha 11)
Chlorocebus sabaeus (African green monkey) : ITGA11 (integrin subunit alpha 11)
Heterocephalus glaber (naked mole-rat) : Itga11 (integrin subunit alpha 11)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0867,566,874 - 67,683,973 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl867,615,635 - 67,683,973 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0867,298,905 - 67,412,933 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4866,828,256 - 66,937,646 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1866,846,583 - 66,956,671 (+)NCBI
Celera862,562,476 - 62,669,109 (+)NCBICelera
Cytogenetic Map8q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Itga11
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311711
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.