Gene: Itga9 (integrin subunit alpha 9) Rattus norvegicus
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Symbol: Itga9
Name: integrin subunit alpha 9
Description: Exhibits collagen binding activity and laminin binding activity; involved in wound healing; localizes to the integrin alpha9-beta1 complex; orthologous to human ITGA9 (integrin subunit alpha 9); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: MODEL
Also known as: integrin alpha 9; integrin alpha 9-like; integrin alpha-9; integrin, alpha 9; Itga9l; LOC316055; LOC685004; similar to integrin alpha 9
Orthologs:
Homo sapiens (human) : ITGA9 (integrin subunit alpha 9)  HGNC  Alliance
Mus musculus (house mouse) : Itga9 (integrin alpha 9)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Itga9 (integrin subunit alpha 9)
Pan paniscus (bonobo/pygmy chimpanzee) : ITGA9 (integrin subunit alpha 9)
Canis lupus familiaris (dog) : CTDSPL (CTD small phosphatase like)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Itga9 (integrin subunit alpha 9)
Sus scrofa (pig) : ITGA9 (integrin subunit alpha 9)
more info ...
Allele / Splice: Itga9em1Mcwi  
Genetic Models: SS-Itga9em1Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08127,271,029 - 127,576,709 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.08126,493,359 - 126,795,566 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48123,526,904 - 123,838,241 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18123,387,039 - 123,857,990 (+)NCBI
Celera8117,492,541 - 117,791,124 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Itga9
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1311191
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-04-23
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.