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ONTOLOGY REPORT - ANNOTATIONS

Term:spliceosomal complex
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Accession:GO:0005681 term browser browse the term
Definition:Any of a series of ribonucleoprotein complexes that contain snRNA(s) and small nuclear ribonucleoproteins (snRNPs), and are formed sequentially during the spliceosomal splicing of one or more substrate RNAs, and which also contain the RNA substrate(s) from the initial target RNAs of splicing, the splicing intermediate RNA(s), to the final RNA products. During cis-splicing, the initial target RNA is a single, contiguous RNA transcript, whether mRNA, snoRNA, etc., and the released products are a spliced RNA and an excised intron, generally as a lariat structure. During trans-splicing, there are two initial substrate RNAs, the spliced leader RNA and a pre-mRNA.
Synonyms:exact_synonym: spliceosome complex
 broad_synonym: spliceosome
 xref: Wikipedia:Spliceosome


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spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G API5 apoptosis inhibitor 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:26,326,387...26,355,580
Ensembl chr18:26,327,920...26,355,585 		JBrowse link
G AQR aquarius intron-binding spliceosomal factor part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr30:2,571,359...2,670,715
Ensembl chr30:2,571,554...2,670,597 		JBrowse link
G BCAS2 BCAS2 pre-mRNA processing factor part_of IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr17:52,277,677...52,291,150
Ensembl chr17:52,277,804...52,291,022 		JBrowse link
G BUD31 BUD31 homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr 6:10,169,422...10,178,231 JBrowse link
G C9H9orf78 chromosome 9 C9orf78 homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr 9:54,009,543...54,016,154
Ensembl chr 9:54,009,611...54,015,898 		JBrowse link
G CACTIN cactin, spliceosome C complex subunit part_of IBA GO_Central GO_REF:0000033 NCBI chr20:55,803,494...55,817,467
Ensembl chr20:55,803,530...55,816,549 		JBrowse link
G CASC3 CASC3 exon junction complex subunit part_of IEA UniProt GO_REF:0000043 NCBI chr 9:22,403,139...22,427,475
Ensembl chr 9:22,405,336...22,427,426 		JBrowse link
G CDC5L cell division cycle 5 like part_of IEA
IBA		 Ensembl
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 GO_REF:0000107 NCBI chr12:12,779,936...12,822,978
Ensembl chr12:12,780,010...12,822,801 		JBrowse link
G CIRBP cold inducible RNA binding protein part_of IBA GO_Central GO_REF:0000033 NCBI chr20:57,521,609...57,526,526
Ensembl chr20:57,519,119...57,526,435 		JBrowse link
G CLNS1A chloride nucleotide-sensitive channel 1A part_of IBA GO_Central GO_REF:0000033 NCBI chr21:21,136,913...21,177,678
Ensembl chr21:21,136,931...21,160,703 		JBrowse link
G CRIPT CXXC repeat containing interactor of PDZ3 domain part_of IEA UniProt GO_REF:0000043 NCBI chr10:48,840,243...48,851,461
Ensembl chr10:48,839,509...48,851,258 		JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:3,294,607...3,310,846
Ensembl chr24:3,294,616...3,310,702 		JBrowse link
G CTNNBL1 catenin beta like 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr24:26,253,884...26,415,166
Ensembl chr24:26,253,962...26,415,163 		JBrowse link
G CWC15 CWC15 spliceosome associated protein homolog part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr21:6,037,305...6,049,124
Ensembl chr21:6,038,656...6,048,400 		JBrowse link
G CWC22 CWC22 spliceosome associated protein homolog part_of IEA Ensembl GO_REF:0000107 NCBI chr36:23,355,501...23,415,059
Ensembl chr36:23,168,979...23,397,045 		JBrowse link
G CWC25 CWC25 spliceosome associated protein homolog part_of IEA UniProt GO_REF:0000043 NCBI chr 9:23,426,005...23,443,512
Ensembl chr 9:23,426,038...23,443,040 		JBrowse link
G DDX39B DExD-box helicase 39B part_of IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr12:1,032,377...1,044,465
Ensembl chr12:1,032,368...1,044,492 		JBrowse link
G DDX41 DEAD-box helicase 41 located_in
part_of		 ISO
IBA		 (PMID:25920683) UniProt
GO_Central		 PMID:25920683 GO_REF:0000033 NCBI chr 4:35,854,382...35,859,853
Ensembl chr 4:35,854,597...35,859,852 		JBrowse link
G DDX5 DEAD-box helicase 5 part_of IEA UniProt GO_REF:0000043 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663 		JBrowse link
G DHX16 DEAH-box helicase 16 part_of IEA Ensembl GO_REF:0000107 NCBI chr12:460,669...478,026
Ensembl chr12:460,713...478,001 		JBrowse link
G DHX32 DEAH-box helicase 32 (putative) part_of IBA GO_Central GO_REF:0000033 NCBI chr28:34,999,030...35,035,964
Ensembl chr28:34,999,204...35,035,964 		JBrowse link
G DHX38 DEAH-box helicase 38 part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:77,810,853...77,830,020
Ensembl chr 5:77,811,041...77,830,015 		JBrowse link
G DHX40 DEAH-box helicase 40 part_of IBA GO_Central GO_REF:0000033 NCBI chr 9:34,058,547...34,104,976
Ensembl chr 9:34,058,392...34,104,922 		JBrowse link
G DNAJC17 DnaJ heat shock protein family (Hsp40) member C17 part_of IBA GO_Central GO_REF:0000033 NCBI chr30:7,904,519...7,945,222
Ensembl chr30:7,904,517...7,945,125 		JBrowse link
G DQX1 DEAQ-box RNA dependent ATPase 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr17:48,617,170...48,623,591
Ensembl chr17:48,617,613...48,623,591 		JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 part_of IEA UniProt GO_REF:0000043 NCBI chr 9:18,585,918...18,631,743
Ensembl chr 9:18,585,971...18,635,570 		JBrowse link
G GEMIN2 gem nuclear organelle associated protein 2 part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:17,305,884...17,328,698
Ensembl chr 8:17,305,907...17,328,582 		JBrowse link
G GPKOW G-patch domain and KOW motifs part_of ISO (PMID:25296192) UniProt PMID:25296192 NCBI chr  X:42,248,121...42,266,747
Ensembl chr  X:42,248,611...42,257,286 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 part_of IEA Ensembl GO_REF:0000107 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K part_of IEA UniProt GO_REF:0000043 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M part_of IEA Ensembl GO_REF:0000107 NCBI chr20:52,993,934...53,034,608
Ensembl chr20:52,993,824...53,034,606 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:11,292,219...11,296,851
Ensembl chr 5:11,292,262...11,296,797 		JBrowse link
G KHDC4 KH domain containing 4, pre-mRNA splicing factor part_of
located_in		 IEA
ISO		 (PMID:19641227), (PMID:23144703) Ensembl
UniProt		 PMID:19641227 PMID:23144703 GO_REF:0000107 NCBI chr 7:41,875,837...41,893,819
Ensembl chr 7:41,875,652...41,894,572 		JBrowse link
G LGALS3 galectin 3 part_of IEA UniProt GO_REF:0000043 NCBI chr 8:30,977,438...30,994,711
Ensembl chr 8:30,983,633...30,994,705 		JBrowse link
G LOC100684705 methylosome subunit pICln-like part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:96,495,470...96,497,006 JBrowse link
G LOC100687756 transformer-2 protein homolog beta-like part_of IBA GO_Central GO_REF:0000033 NCBI chr20:42,198,746...42,200,101 JBrowse link
G LOC100687873 small nuclear ribonucleoprotein polypeptide E pseudogene part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr 8:15,582,856...15,583,331 JBrowse link
G LOC100855556 U6 snRNA-associated Sm-like protein LSm8 part_of IEA UniProt GO_REF:0000043 NCBI chr 3:3,633,656...3,634,121 JBrowse link
G LOC102152884 small nuclear ribonucleoprotein Sm D3-like part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:60,094,850...60,095,507 JBrowse link
G LOC102154080 U6 snRNA-associated Sm-like protein LSm3 part_of IEA UniProt GO_REF:0000043 NCBI chr15:14,519,325...14,519,728 JBrowse link
G LOC111098242 small nuclear ribonucleoprotein G-like part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr12:6,244,678...6,245,140 JBrowse link
G LOC111098753 protein BUD31 homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr14:18,692,593...18,693,230 JBrowse link
G LOC119865017 U6 snRNA-associated Sm-like protein LSm3 part_of IEA UniProt GO_REF:0000043
G LOC119865916 U6 snRNA-associated Sm-like protein LSm3 part_of IEA UniProt GO_REF:0000043
G LOC119866711 RNA-binding motif protein, X chromosome part_of IBA GO_Central GO_REF:0000033
G LOC119873859 heat shock cognate 71 kDa protein-like part_of IEA Ensembl GO_REF:0000107
G LOC119874482 splicing factor 3A subunit 3 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033
G LOC119876148 peptidyl-prolyl cis-trans isomerase-like 1 part_of IEA UniProt GO_REF:0000043
G LOC119876849 pre-mRNA-splicing factor 18 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043
G LOC119877253 U6 snRNA-associated Sm-like protein LSm8 part_of IEA UniProt GO_REF:0000043
G LOC119877863 U1 small nuclear ribonucleoprotein C part_of IEA Ensembl GO_REF:0000107
G LOC119878074 small nuclear ribonucleoprotein Sm D3-like part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043
G LOC119878152 galectin-3-like part_of IEA UniProt GO_REF:0000043
G LOC119878899 galectin-3-like part_of IEA UniProt GO_REF:0000043
G LOC475399 heterogeneous nuclear ribonucleoprotein C part_of ISO (PMID:9731529) HGNC-UCL PMID:9731529 NCBI chr15:18,239,810...18,299,065 JBrowse link
G LOC478184 pre-mRNA-splicing factor SYF2 part_of IEA UniProt GO_REF:0000043 NCBI chr 2:74,573,023...74,580,061 JBrowse link
G LOC478391 chloride channel, nucleotide-sensitive, 1A pseudogene part_of IBA GO_Central GO_REF:0000033 NCBI chr31:18,016,995...18,017,690 JBrowse link
G LOC607182 heat shock cognate 71 kDa protein-like part_of IEA Ensembl GO_REF:0000107
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA UniProt GO_REF:0000043 NCBI chr12:1,270,328...1,279,269 JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA UniProt GO_REF:0000043 NCBI chr20:4,328,930...4,342,731
Ensembl chr20:4,329,038...4,342,859 		JBrowse link
G LSM3 part_of IEA UniProt GO_REF:0000043
G LSM3 part_of IEA UniProt GO_REF:0000043
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr20:44,707,460...44,720,490
Ensembl chr20:44,707,460...44,720,490 		JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA UniProt GO_REF:0000043 NCBI chr14:44,857,882...44,860,929
Ensembl chr14:44,857,930...44,860,821 		JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA UniProt GO_REF:0000043 NCBI chr15:44,651,830...44,666,418
Ensembl chr15:44,651,830...44,666,418 		JBrowse link
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA UniProt GO_REF:0000043 NCBI chr20:56,730,476...56,735,115
Ensembl chr20:56,730,486...56,735,112 		JBrowse link
G LSM8 LSM8 homolog, U6 small nuclear RNA associated part_of IEA UniProt GO_REF:0000043 NCBI chr14:56,908,344...56,916,512 JBrowse link
G LSM8 LSM8 homolog, U6 small nuclear RNA associated part_of IEA UniProt GO_REF:0000043 NCBI chr18:55,715,008...55,715,562
Ensembl chr18:55,715,105...55,715,395 		JBrowse link
G MAGOH mago homolog, exon junction complex subunit part_of IEA UniProt GO_REF:0000043 NCBI chr 5:55,688,443...55,699,741 JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit part_of IEA UniProt GO_REF:0000043 NCBI chr27:35,125,786...35,133,372 JBrowse link
G NCL nucleolin part_of IBA GO_Central GO_REF:0000033 NCBI chr25:43,330,524...43,384,909
Ensembl chr25:43,330,799...43,384,258 		JBrowse link
G OAZ1 ornithine decarboxylase antizyme 1 part_of IEA UniProt GO_REF:0000043 NCBI chr20:56,769,317...56,770,921
Ensembl chr20:56,769,319...56,770,930 		JBrowse link
G PDCD7 programmed cell death 7 part_of ISO (PMID:33660780) MGI PMID:33660780 NCBI chr30:29,498,290...29,510,991
Ensembl chr30:29,475,498...29,510,575 		JBrowse link
G PLRG1 pleiotropic regulator 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr15:52,196,998...52,213,378
Ensembl chr15:52,198,635...52,213,239 		JBrowse link
G PNN pinin, desmosome associated protein part_of IEA UniProt GO_REF:0000043 NCBI chr 8:17,354,004...17,361,462
Ensembl chr 8:17,354,004...17,361,462 		JBrowse link
G PPIL1 peptidylprolyl isomerase like 1 part_of IEA UniProt GO_REF:0000043 NCBI chr12:5,916,524...5,936,276
Ensembl chr12:5,917,228...5,942,943 		JBrowse link
G PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 part_of IEA UniProt GO_REF:0000043 NCBI chr 2:51,300,163...51,321,110
Ensembl chr 2:51,300,182...51,320,989 		JBrowse link
G PRPF18 pre-mRNA processing factor 18 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 2:22,868,184...22,922,647 JBrowse link
G PRPF19 pre-mRNA processing factor 19 part_of IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G PRPF3 pre-mRNA processing factor 3 part_of IEA UniProt GO_REF:0000043 NCBI chr17:59,552,227...59,577,027
Ensembl chr17:59,552,340...59,577,009 		JBrowse link
G PRPF31 pre-mRNA processing factor 31 part_of IEA UniProt GO_REF:0000043 NCBI chr 1:103,073,359...103,090,652
Ensembl chr 1:103,073,380...103,090,652 		JBrowse link
G PRPF38A pre-mRNA processing factor 38A part_of IEA UniProt GO_REF:0000043 NCBI chr15:8,950,621...8,965,205
Ensembl chr15:8,950,805...8,965,085 		JBrowse link
G PRPF38B pre-mRNA processing factor 38B part_of IEA UniProt GO_REF:0000043 NCBI chr 6:43,044,322...43,052,622
Ensembl chr 6:42,948,236...43,053,027 		JBrowse link
G PRPF4 pre-mRNA splicing tri-snRNP complex factor PRPF4 part_of IEA UniProt GO_REF:0000043 NCBI chr11:67,641,332...67,659,070
Ensembl chr11:67,641,459...67,657,870 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr 9:45,797,882...45,827,365
Ensembl chr 9:45,797,959...45,828,071 		JBrowse link
G PTBP2 polypyrimidine tract binding protein 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:52,870,944...52,948,673
Ensembl chr 6:52,872,310...52,949,025 		JBrowse link
G RBM17 RNA binding motif protein 17 part_of IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chr 2:29,828,720...29,853,922
Ensembl chr 2:29,829,210...29,853,841 		JBrowse link
G RBM22 RNA binding motif protein 22 part_of IEA UniProt GO_REF:0000043 NCBI chr 4:58,460,805...58,470,411
Ensembl chr 4:58,460,847...58,469,762 		JBrowse link
G RBM3 RNA binding motif protein 3 part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:41,806,072...41,809,803
Ensembl chr  X:41,806,176...41,809,481 		JBrowse link
G RBM48 RNA binding motif protein 48 part_of IEA UniProt GO_REF:0000043 NCBI chr14:18,116,022...18,123,283
Ensembl chr14:18,115,468...18,123,283 		JBrowse link
G RBM5 RNA binding motif protein 5 part_of IEA UniProt GO_REF:0000043 NCBI chr20:39,198,706...39,227,856
Ensembl chr20:39,199,154...39,227,769 		JBrowse link
G RBM8A RNA binding motif protein 8A part_of IEA UniProt GO_REF:0000043 NCBI chr17:58,722,449...58,726,017
Ensembl chr17:58,724,227...58,725,969 		JBrowse link
G RBMX RNA binding motif protein X-linked part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:107,173,599...107,182,404
Ensembl chr  X:107,175,634...107,182,347 		JBrowse link
G RHEB Ras homolog, mTORC1 binding part_of IEA Ensembl GO_REF:0000107 NCBI chr16:15,439,910...15,483,489
Ensembl chr16:15,434,111...15,483,419 		JBrowse link
G SCNM1 sodium channel modifier 1 part_of IEA UniProt GO_REF:0000043 NCBI chr17:60,231,034...60,233,349
Ensembl chr17:60,231,104...60,233,337 		JBrowse link
G SF1 splicing factor 1 part_of IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr18:52,380,058...52,393,833
Ensembl chr18:52,380,211...52,393,048 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 part_of IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr26:23,485,551...23,504,242
Ensembl chr26:23,485,797...23,504,346 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 part_of IEA UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 NCBI chr20:56,789,450...56,796,004
Ensembl chr20:56,788,577...56,795,262 		JBrowse link
G SF3A3 splicing factor 3a subunit 3 part_of IEA
IBA		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr15:4,595,812...4,620,565 JBrowse link
G SF3B1 splicing factor 3b subunit 1 part_of IEA UniProt GO_REF:0000043 NCBI chr37:6,922,150...6,962,474
Ensembl chr37:6,924,047...6,962,896 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:51,197,924...51,212,397
Ensembl chr18:51,197,939...51,212,354 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:59,208,989...59,214,643
Ensembl chr17:59,208,990...59,213,991 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 part_of IEA UniProt GO_REF:0000043 NCBI chr 1:35,558,249...35,558,998
Ensembl chr 1:35,558,599...35,558,859 		JBrowse link
G SLU7 SLU7 homolog, splicing factor part_of IEA
IBA		 Ensembl
GO_Central
UniProt		 GO_REF:0000033 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:50,314,063...50,328,999
Ensembl chr 4:50,314,086...50,327,733 		JBrowse link
G SMNDC1 survival motor neuron domain containing 1 part_of IEA UniProt GO_REF:0000043 NCBI chr28:21,660,501...21,672,279
Ensembl chr28:21,661,881...21,671,781 		JBrowse link
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 part_of ISO (PMID:8670905) UniProt PMID:8670905 NCBI chr17:34,472,638...34,505,332
Ensembl chr17:34,472,767...34,505,333 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:107,340,484...107,356,280
Ensembl chr 1:107,113,974...107,356,241 		JBrowse link
G SNRPA small nuclear ribonucleoprotein polypeptide A part_of IEA UniProt GO_REF:0000043 NCBI chr 1:113,018,268...113,030,827
Ensembl chr 1:113,018,304...113,030,734 		JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' part_of IEA UniProt GO_REF:0000043 NCBI chr 3:39,777,947...39,791,256
Ensembl chr 3:39,777,987...39,790,849 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229 		JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:9731529) HGNC-UCL PMID:9731529 NCBI chr24:6,106,217...6,117,369
Ensembl chr24:6,106,217...6,117,369 		JBrowse link
G SNRPC small nuclear ribonucleoprotein polypeptide C part_of IEA Ensembl GO_REF:0000107 NCBI chr12:3,996,483...4,010,904
Ensembl chr12:3,996,520...4,010,889 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO (PMID:33677607) ComplexPortal PMID:33677607 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F part_of IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000043 NCBI chr15:35,691,071...35,698,734 JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G SNW1 SNW domain containing 1 part_of IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G SRRM1 serine and arginine repetitive matrix 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr 2:75,018,637...75,053,908
Ensembl chr 2:75,019,339...75,049,398 		JBrowse link
G SRRM2 serine/arginine repetitive matrix 2 part_of IEA UniProt GO_REF:0000043 NCBI chr 6:38,291,847...38,310,624
Ensembl chr 6:38,291,842...38,393,924 		JBrowse link
G SRSF2 serine and arginine rich splicing factor 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:4,028,414...4,032,371
Ensembl chr 9:4,028,482...4,030,793 		JBrowse link
G STXBP3 syntaxin binding protein 3 part_of IEA UniProt GO_REF:0000043 NCBI chr 6:42,947,639...42,998,297
Ensembl chr 6:42,948,236...43,053,027 		JBrowse link
G TFIP11 tuftelin interacting protein 11 part_of IEA
ISS		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr26:20,177,896...20,192,466
Ensembl chr26:20,177,904...20,192,469 		JBrowse link
G TRA2A transformer 2 alpha homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr14:37,159,890...37,183,457
Ensembl chr14:37,160,872...37,183,274 		JBrowse link
G TRA2B transformer 2 beta homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr34:18,637,725...18,656,869
Ensembl chr34:18,638,325...18,657,862 		JBrowse link
G TSSC4 tumor suppressing subtransferable candidate 4 part_of IEA UniProt GO_REF:0000043 NCBI chr18:46,476,168...46,478,651
Ensembl chr18:46,477,427...46,478,389 		JBrowse link
G TXNL4A thioredoxin like 4A part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:722,223...735,253
Ensembl chr 1:722,293...735,258 		JBrowse link
G TXNL4B thioredoxin like 4B part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:77,765,461...77,810,729
Ensembl chr 5:77,803,575...77,810,637 		JBrowse link
G U2AF1 U2 small nuclear RNA auxiliary factor 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr31:37,263,265...37,276,710 JBrowse link
G U2AF1L4 U2 small nuclear RNA auxiliary factor 1 like 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:116,888,680...116,890,911
Ensembl chr 1:116,888,720...116,890,923 		JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:102,074,759...102,091,326
Ensembl chr 1:102,074,790...102,091,385 		JBrowse link
G USP39 ubiquitin specific peptidase 39 part_of IEA UniProt GO_REF:0000043 NCBI chr17:39,437,908...39,470,579
Ensembl chr17:39,438,329...39,470,549 		JBrowse link
G WAC WW domain containing adaptor with coiled-coil part_of ISO (PMID:11827461) MGI PMID:11827461 NCBI chr 2:17,504,949...17,588,037 JBrowse link
G WBP4 WW domain binding protein 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr22:9,504,525...9,565,230
Ensembl chr22:9,505,012...9,565,208 		JBrowse link
G WDR83 WD repeat domain 83 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:49,439,387...49,443,661
Ensembl chr20:49,439,387...49,443,661 		JBrowse link
G XAB2 XPA binding protein 2 part_of IEA UniProt GO_REF:0000043 NCBI chr20:52,392,521...52,406,071
Ensembl chr20:52,392,566...52,405,997 		JBrowse link
G YJU2 YJU2 splicing factor homolog part_of IEA UniProt GO_REF:0000043 NCBI chr20:55,367,512...55,380,755
Ensembl chr20:55,368,480...55,380,679 		JBrowse link
G ZCRB1 zinc finger CCHC-type and RNA binding motif containing 1 part_of IEA UniProt GO_REF:0000043 NCBI chr27:11,590,152...11,605,079
Ensembl chr27:11,590,332...11,604,986 		JBrowse link
G ZMAT2 zinc finger matrin-type 2 part_of IEA InterPro GO_REF:0000002 NCBI chr 2:35,851,972...35,860,818
Ensembl chr 2:35,852,109...35,858,065 		JBrowse link
G ZNF830 zinc finger protein 830 part_of IEA InterPro GO_REF:0000002 NCBI chr 9:38,382,508...38,384,060
Ensembl chr 9:38,382,900...38,384,015 		JBrowse link
G ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:12,046,163...12,073,617
Ensembl chr  X:12,046,921...12,073,440 		JBrowse link
catalytic step 2 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALYREF Aly/REF export factor part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr 9:398,207...402,787
Ensembl chr 9:399,072...402,721 		JBrowse link
G AQR aquarius intron-binding spliceosomal factor part_of IEA
IBA		 UniProt
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr30:2,571,359...2,670,715
Ensembl chr30:2,571,554...2,670,597 		JBrowse link
G BCAS2 BCAS2 pre-mRNA processing factor part_of IBA GO_Central GO_REF:0000033 NCBI chr17:52,277,677...52,291,150
Ensembl chr17:52,277,804...52,291,022 		JBrowse link
G CACTIN cactin, spliceosome C complex subunit part_of IEA Ensembl GO_REF:0000107 NCBI chr20:55,803,494...55,817,467
Ensembl chr20:55,803,530...55,816,549 		JBrowse link
G CDC40 cell division cycle 40 part_of IEA
IBA		 InterPro
GO_Central
Ensembl		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr12:66,897,953...66,950,131
Ensembl chr12:66,897,412...66,949,366 		JBrowse link
G CDC5L cell division cycle 5 like part_of IEA Ensembl GO_REF:0000107 NCBI chr12:12,779,936...12,822,978
Ensembl chr12:12,780,010...12,822,801 		JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:3,294,607...3,310,846
Ensembl chr24:3,294,616...3,310,702 		JBrowse link
G CWC15 CWC15 spliceosome associated protein homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr21:6,037,305...6,049,124
Ensembl chr21:6,038,656...6,048,400 		JBrowse link
G CWC22 CWC22 spliceosome associated protein homolog part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr36:23,355,501...23,415,059
Ensembl chr36:23,168,979...23,397,045 		JBrowse link
G CWC27 CWC27 spliceosome associated cyclophilin part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:50,654,977...50,847,055
Ensembl chr 2:50,655,037...50,846,604 		JBrowse link
G DDX23 DEAD-box helicase 23 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr27:5,690,452...5,704,762
Ensembl chr27:5,693,931...5,704,778 		JBrowse link
G DDX41 DEAD-box helicase 41 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr 4:35,854,382...35,859,853
Ensembl chr 4:35,854,597...35,859,852 		JBrowse link
G DDX5 DEAD-box helicase 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:12,300,706...12,307,931
Ensembl chr 9:12,300,708...12,307,663 		JBrowse link
G DHX35 DEAH-box helicase 35 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr24:27,329,842...27,394,005
Ensembl chr24:27,329,786...27,393,101 		JBrowse link
G DHX38 DEAH-box helicase 38 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:77,810,853...77,830,020
Ensembl chr 5:77,811,041...77,830,015 		JBrowse link
G DHX8 DEAH-box helicase 8 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:19,734,356...19,766,212
Ensembl chr 9:19,729,816...19,766,555 		JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:18,585,918...18,631,743
Ensembl chr 9:18,585,971...18,635,570 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:1,582,950...1,593,893
Ensembl chr 9:1,582,993...1,593,892 		JBrowse link
G ESS2 ess-2 splicing factor homolog part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr26:30,037,954...30,048,487
Ensembl chr26:30,038,015...30,049,204 		JBrowse link
G FRG1 FSHD region gene 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr16:41,361,347...41,381,088
Ensembl chr16:41,361,436...41,401,007 		JBrowse link
G GPATCH1 G-patch domain containing 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:119,009,605...119,052,676
Ensembl chr 1:119,009,609...119,053,140 		JBrowse link
G HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr27:1,013,459...1,020,083
Ensembl chr27:1,015,868...1,019,891 		JBrowse link
G HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr14:39,498,805...39,509,034
Ensembl chr14:39,500,897...39,508,952 		JBrowse link
G HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr36:20,974,541...20,983,972
Ensembl chr36:20,974,648...20,980,137 		JBrowse link
G HNRNPF heterogeneous nuclear ribonucleoprotein F part_of IEA Ensembl GO_REF:0000107 NCBI chr28:3,651,685...3,672,320
Ensembl chr28:3,670,455...3,671,699 		JBrowse link
G HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 part_of IEA Ensembl GO_REF:0000107 NCBI chr11:2,050,753...2,059,999
Ensembl chr11:2,050,871...2,059,999 		JBrowse link
G HNRNPK heterogeneous nuclear ribonucleoprotein K part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr 1:75,499,334...75,511,525
Ensembl chr 1:75,499,393...75,511,425 		JBrowse link
G HNRNPM heterogeneous nuclear ribonucleoprotein M part_of IEA Ensembl GO_REF:0000107 NCBI chr20:52,993,934...53,034,608
Ensembl chr20:52,993,824...53,034,606 		JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:76,073,553...76,108,763
Ensembl chr 2:76,077,022...76,105,433 		JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:35,832,956...35,842,898
Ensembl chr 7:35,833,988...35,843,754 		JBrowse link
G ISY1 ISY1 splicing factor homolog part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:2,945,636...2,972,245
Ensembl chr20:2,945,720...2,972,245 		JBrowse link
G LOC102154080 U6 snRNA-associated Sm-like protein LSm3 part_of IBA GO_Central GO_REF:0000033 NCBI chr15:14,519,325...14,519,728 JBrowse link
G LOC102156730 heterogeneous nuclear ribonucleoprotein A1-like part_of IBA GO_Central GO_REF:0000033 NCBI chr 4:45,022,979...45,116,965 JBrowse link
G LOC111098242 small nuclear ribonucleoprotein G-like part_of IBA GO_Central GO_REF:0000033 NCBI chr12:6,244,678...6,245,140 JBrowse link
G LOC119865017 U6 snRNA-associated Sm-like protein LSm3 part_of IBA GO_Central GO_REF:0000033
G LOC119866566 heterogeneous nuclear ribonucleoprotein A3 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G LOC119866711 RNA-binding motif protein, X chromosome part_of IEA Ensembl GO_REF:0000107
G LOC119874304 heterogeneous nuclear ribonucleoprotein A1-like part_of IBA GO_Central GO_REF:0000033
G LOC119881680 heterogeneous nuclear ribonucleoprotein A3 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107
G LOC475399 heterogeneous nuclear ribonucleoprotein C part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr15:18,239,810...18,299,065 JBrowse link
G LOC478184 pre-mRNA-splicing factor SYF2 part_of IBA GO_Central GO_REF:0000033 NCBI chr 2:74,573,023...74,580,061 JBrowse link
G LOC608117 heterogeneous nuclear ribonucleoprotein A1-like part_of IBA GO_Central GO_REF:0000033 NCBI chr20:17,617,485...17,618,563 JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr12:1,270,328...1,279,269 JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:4,328,930...4,342,731
Ensembl chr20:4,329,038...4,342,859 		JBrowse link
G LSM3 part_of IBA GO_Central GO_REF:0000033
G LSM3 part_of IBA GO_Central GO_REF:0000033
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_Central GO_REF:0000033 NCBI chr20:56,730,476...56,735,115
Ensembl chr20:56,730,486...56,735,112 		JBrowse link
G MAGOH mago homolog, exon junction complex subunit part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:55,688,443...55,699,741 JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit part_of IBA GO_Central GO_REF:0000033 NCBI chr27:35,125,786...35,133,372 JBrowse link
G MTREX Mtr4 exosome RNA helicase part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:42,660,448...42,763,133
Ensembl chr 2:42,660,653...42,763,133 		JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr13:2,563,698...2,580,610
Ensembl chr13:2,564,065...2,580,368 		JBrowse link
G PLRG1 pleiotropic regulator 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:52,196,998...52,213,378
Ensembl chr15:52,198,635...52,213,239 		JBrowse link
G PNN pinin, desmosome associated protein part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 8:17,354,004...17,361,462
Ensembl chr 8:17,354,004...17,361,462 		JBrowse link
G PPIE peptidylprolyl isomerase E part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:3,156,067...3,173,028
Ensembl chr15:3,153,628...3,172,988 		JBrowse link
G PPIL1 peptidylprolyl isomerase like 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr12:5,916,524...5,936,276
Ensembl chr12:5,917,228...5,942,943 		JBrowse link
G PPIL2 peptidylprolyl isomerase like 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr26:30,939,556...30,966,210
Ensembl chr26:30,939,628...30,964,880 		JBrowse link
G PPIL3 peptidylprolyl isomerase like 3 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr37:10,067,208...10,082,827
Ensembl chr37:10,054,237...10,082,759 		JBrowse link
G PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:51,300,163...51,321,110
Ensembl chr 2:51,300,182...51,320,989 		JBrowse link
G PRP4K pre-mRNA processing factor kinase PRP4K part_of IEA Ensembl GO_REF:0000107 NCBI chr35:4,274,664...4,311,813
Ensembl chr35:4,271,685...4,307,750 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G PRPF6 pre-mRNA processing factor 6 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr24:47,439,210...47,483,531
Ensembl chr24:47,433,130...47,483,522 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:45,797,882...45,827,365
Ensembl chr 9:45,797,959...45,828,071 		JBrowse link
G RALY RALY heterogeneous nuclear ribonucleoprotein part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr24:23,173,209...23,258,712
Ensembl chr24:23,173,650...23,257,138 		JBrowse link
G RBM22 RNA binding motif protein 22 part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:58,460,805...58,470,411
Ensembl chr 4:58,460,847...58,469,762 		JBrowse link
G RBM44 RNA binding motif protein 44 part_of IBA GO_Central GO_REF:0000033 NCBI chr25:48,378,913...48,420,011
Ensembl chr25:48,378,970...48,410,104 		JBrowse link
G RBM8A RNA binding motif protein 8A part_of IEA Ensembl GO_REF:0000107 NCBI chr17:58,722,449...58,726,017
Ensembl chr17:58,724,227...58,725,969 		JBrowse link
G RBMX RNA binding motif protein X-linked part_of IEA Ensembl GO_REF:0000107 NCBI chr  X:107,173,599...107,182,404
Ensembl chr  X:107,175,634...107,182,347 		JBrowse link
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP part_of IEA Ensembl GO_REF:0000107 NCBI chr18:51,297,419...51,313,804
Ensembl chr18:51,297,419...51,313,793 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr26:23,485,551...23,504,242
Ensembl chr26:23,485,797...23,504,346 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:56,789,450...56,796,004
Ensembl chr20:56,788,577...56,795,262 		JBrowse link
G SF3A3 splicing factor 3a subunit 3 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr15:4,595,812...4,620,565 JBrowse link
G SF3B1 splicing factor 3b subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr37:6,922,150...6,962,474
Ensembl chr37:6,924,047...6,962,896 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:51,197,924...51,212,397
Ensembl chr18:51,197,939...51,212,354 		JBrowse link
G SF3B3 splicing factor 3b subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:76,490,622...76,543,877
Ensembl chr 5:76,490,682...76,543,877 		JBrowse link
G SLU7 SLU7 homolog, splicing factor part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:50,314,063...50,328,999
Ensembl chr 4:50,314,086...50,327,733 		JBrowse link
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr17:34,472,638...34,505,332
Ensembl chr17:34,472,767...34,505,333 		JBrowse link
G SNRNP40 small nuclear ribonucleoprotein U5 subunit 40 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:69,721,065...69,761,306
Ensembl chr 2:69,721,087...69,804,165 		JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr 3:39,777,947...39,791,256
Ensembl chr 3:39,777,987...39,790,849 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229 		JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr24:6,106,217...6,117,369
Ensembl chr24:6,106,217...6,117,369 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of IBA GO_Central GO_REF:0000033 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F part_of IBA GO_Central GO_REF:0000033 NCBI chr15:35,691,071...35,698,734 JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of IBA GO_Central GO_REF:0000033 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G SNRPN small nuclear ribonucleoprotein polypeptide N part_of IBA GO_Central GO_REF:0000033 NCBI chr 3:35,837,582...35,842,925
Ensembl chr 3:35,837,468...35,862,877 		JBrowse link
G SNW1 SNW domain containing 1 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G SRRM1 serine and arginine repetitive matrix 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:75,018,637...75,053,908
Ensembl chr 2:75,019,339...75,049,398 		JBrowse link
G SRRM2 serine/arginine repetitive matrix 2 part_of ISO (PMID:11991638) UniProt PMID:11991638 NCBI chr 6:38,291,847...38,310,624
Ensembl chr 6:38,291,842...38,393,924 		JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:32,692,517...32,696,325
Ensembl chr 9:32,694,073...32,696,285 		JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein part_of IEA Ensembl GO_REF:0000107 NCBI chr12:45,613,947...45,644,879
Ensembl chr12:45,618,234...45,644,778 		JBrowse link
G TFIP11 tuftelin interacting protein 11 part_of IEA Ensembl GO_REF:0000107 NCBI chr26:20,177,896...20,192,466
Ensembl chr26:20,177,904...20,192,469 		JBrowse link
G U2AF1 U2 small nuclear RNA auxiliary factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr31:37,263,265...37,276,710 JBrowse link
G WDR83 WD repeat domain 83 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:49,439,387...49,443,661
Ensembl chr20:49,439,387...49,443,661 		JBrowse link
G XAB2 XPA binding protein 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:52,392,521...52,406,071
Ensembl chr20:52,392,566...52,405,997 		JBrowse link
G ZCCHC8 zinc finger CCHC-type containing 8 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr26:6,895,873...6,927,262
Ensembl chr26:6,895,904...6,926,484 		JBrowse link
commitment complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100682636 U1 small nuclear ribonucleoprotein C-like part_of IEA UniProt GO_REF:0000104 NCBI chr33:10,139,384...10,139,966 JBrowse link
G LOC100856126 U1 small nuclear ribonucleoprotein C-like part_of IEA UniProt GO_REF:0000104 NCBI chr 7:26,039,248...26,039,982 JBrowse link
G LOC102154571 U1 small nuclear ribonucleoprotein C-like part_of IEA UniProt GO_REF:0000104 NCBI chr 3:72,361,077...72,363,844 JBrowse link
G LOC119877863 U1 small nuclear ribonucleoprotein C part_of IEA UniProt GO_REF:0000104
G PRPF39 pre-mRNA processing factor 39 part_of IBA GO_Central GO_REF:0000033 NCBI chr 8:22,510,816...22,549,481
Ensembl chr 8:22,511,329...22,549,226 		JBrowse link
G SNRPC small nuclear ribonucleoprotein polypeptide C part_of IEA UniProt GO_REF:0000104 NCBI chr12:3,996,483...4,010,904
Ensembl chr12:3,996,520...4,010,889 		JBrowse link
G SNRPC part_of IEA UniProt GO_REF:0000104
G SNRPC part_of IEA UniProt GO_REF:0000104
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IBA GO_Central GO_REF:0000033 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of IBA GO_Central GO_REF:0000033 NCBI chr26:28,247,878...28,263,519 JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:102,074,759...102,091,326
Ensembl chr 1:102,074,790...102,091,385 		JBrowse link
post-mRNA release spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCDC12 coiled-coil domain containing 12 part_of IBA GO_Central GO_REF:0000033 NCBI chr20:41,838,497...41,889,902
Ensembl chr20:41,834,095...41,890,482 		JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr24:3,294,607...3,310,846
Ensembl chr24:3,294,616...3,310,702 		JBrowse link
G CWF19L1 CWF19 like 1, cell cycle control part_of IBA GO_Central GO_REF:0000033 NCBI chr28:13,003,948...13,033,369
Ensembl chr28:13,003,987...13,033,281 		JBrowse link
G CWF19L2 CWF19 like cell cycle control factor 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:24,936,700...25,080,927
Ensembl chr 5:24,833,373...25,080,451 		JBrowse link
G ISY1 ISY1 splicing factor homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr20:2,945,636...2,972,245
Ensembl chr20:2,945,720...2,972,245 		JBrowse link
G LOC478184 pre-mRNA-splicing factor SYF2 part_of IBA GO_Central GO_REF:0000033 NCBI chr 2:74,573,023...74,580,061 JBrowse link
G XAB2 XPA binding protein 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr20:52,392,521...52,406,071
Ensembl chr20:52,392,566...52,405,997 		JBrowse link
G YJU2B YJU2 splicing factor homolog B part_of IBA GO_Central GO_REF:0000033 NCBI chr20:48,659,426...48,671,771
Ensembl chr20:48,659,652...48,669,329 		JBrowse link
post-spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISY1 ISY1 splicing factor homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr20:2,945,636...2,972,245
Ensembl chr20:2,945,720...2,972,245 		JBrowse link
precatalytic spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100687873 small nuclear ribonucleoprotein polypeptide E pseudogene part_of IBA GO_Central GO_REF:0000033 NCBI chr 8:15,582,856...15,583,331 JBrowse link
G LOC100855556 U6 snRNA-associated Sm-like protein LSm8 part_of IBA GO_Central GO_REF:0000033 NCBI chr 3:3,633,656...3,634,121 JBrowse link
G LOC102154080 U6 snRNA-associated Sm-like protein LSm3 part_of IBA GO_Central GO_REF:0000033 NCBI chr15:14,519,325...14,519,728 JBrowse link
G LOC111098242 small nuclear ribonucleoprotein G-like part_of IBA GO_Central GO_REF:0000033 NCBI chr12:6,244,678...6,245,140 JBrowse link
G LOC119865017 U6 snRNA-associated Sm-like protein LSm3 part_of IBA GO_Central GO_REF:0000033
G LOC609886 NHP2-like protein 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:99,519,362...99,520,465 JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_Central GO_REF:0000033 NCBI chr12:1,270,328...1,279,269 JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_Central GO_REF:0000033 NCBI chr20:4,328,930...4,342,731
Ensembl chr20:4,329,038...4,342,859 		JBrowse link
G LSM3 part_of IBA GO_Central GO_REF:0000033
G LSM3 part_of IBA GO_Central GO_REF:0000033
G LSM8 LSM8 homolog, U6 small nuclear RNA associated part_of IBA GO_Central GO_REF:0000033 NCBI chr14:56,908,344...56,916,512 JBrowse link
G LSM8 LSM8 homolog, U6 small nuclear RNA associated part_of IBA GO_Central GO_REF:0000033 NCBI chr18:55,715,008...55,715,562
Ensembl chr18:55,715,105...55,715,395 		JBrowse link
G PHF5A PHD finger protein 5A part_of IBA GO_Central GO_REF:0000033 NCBI chr10:23,798,854...23,809,024
Ensembl chr10:23,798,969...23,808,865 		JBrowse link
G PRPF31 pre-mRNA processing factor 31 part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:103,073,359...103,090,652
Ensembl chr 1:103,073,380...103,090,652 		JBrowse link
G PRPF38A pre-mRNA processing factor 38A part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr15:8,950,621...8,965,205
Ensembl chr15:8,950,805...8,965,085 		JBrowse link
G PRPF38B pre-mRNA processing factor 38B part_of IBA GO_Central GO_REF:0000033 NCBI chr 6:43,044,322...43,052,622
Ensembl chr 6:42,948,236...43,053,027 		JBrowse link
G RBMX2 RNA binding motif protein X-linked 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:101,533,732...101,547,147
Ensembl chr  X:101,533,835...101,544,552 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr18:51,197,924...51,212,397
Ensembl chr18:51,197,939...51,212,354 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr17:59,208,989...59,214,643
Ensembl chr17:59,208,990...59,213,991 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 part_of IEA
IBA		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 1:35,558,249...35,558,998
Ensembl chr 1:35,558,599...35,558,859 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IBA GO_Central GO_REF:0000033 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of IBA GO_Central GO_REF:0000033 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E part_of IBA GO_Central GO_REF:0000033 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535 		JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of IBA GO_Central GO_REF:0000033 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G SNU13 small nuclear ribonucleoprotein 13 part_of IBA GO_Central GO_REF:0000033 NCBI chr10:23,622,897...23,631,526
Ensembl chr10:23,618,293...23,631,004 		JBrowse link
G WBP4 WW domain binding protein 4 part_of IBA GO_Central GO_REF:0000033 NCBI chr22:9,504,525...9,565,230
Ensembl chr22:9,505,012...9,565,208 		JBrowse link
supraspliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:42,762,021...42,785,192
Ensembl chr 7:42,748,136...42,782,999 		JBrowse link
G LOC119866711 RNA-binding motif protein, X chromosome part_of IEA Ensembl GO_REF:0000107
G RBMX RNA binding motif protein X-linked part_of IEA Ensembl GO_REF:0000107 NCBI chr  X:107,173,599...107,182,404
Ensembl chr  X:107,175,634...107,182,347 		JBrowse link
G UPF1 UPF1 RNA helicase and ATPase part_of IEA Ensembl GO_REF:0000107 NCBI chr20:44,234,411...44,271,129
Ensembl chr20:44,236,264...44,270,916 		JBrowse link
U12-type spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX15 DEAH-box helicase 15 part_of IEA Ensembl GO_REF:0000107 NCBI chr 3:85,549,946...85,609,598
Ensembl chr 3:85,549,981...85,609,612 		JBrowse link
G KMT5A lysine methyltransferase 5A part_of IBA GO_Central GO_REF:0000033 NCBI chr26:6,120,500...6,190,178
Ensembl chr  X:25,917,892...25,919,436
Ensembl chr26:25,917,892...25,919,436 		JBrowse link
G LOC111098242 small nuclear ribonucleoprotein G-like part_of IBA GO_Central GO_REF:0000033 NCBI chr12:6,244,678...6,245,140 JBrowse link
G LOC119874741 splicing factor 3B subunit 6 part_of IEA Ensembl GO_REF:0000107
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_Central GO_REF:0000033 NCBI chr20:56,730,476...56,735,115
Ensembl chr20:56,730,486...56,735,112 		JBrowse link
G PDCD7 programmed cell death 7 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr30:29,498,290...29,510,991
Ensembl chr30:29,475,498...29,510,575 		JBrowse link
G PHF5A PHD finger protein 5A part_of IEA Ensembl GO_REF:0000107 NCBI chr10:23,798,854...23,809,024
Ensembl chr10:23,798,969...23,808,865 		JBrowse link
G RBM41 RNA binding motif protein 41 part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:80,648,486...80,704,403
Ensembl chr  X:80,651,475...80,704,351 		JBrowse link
G RNPC3 RNA binding region (RNP1, RRM) containing 3 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:46,960,033...47,044,272
Ensembl chr 6:47,016,038...47,044,236 		JBrowse link
G SF3B1 splicing factor 3b subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr37:6,922,150...6,962,474
Ensembl chr37:6,924,047...6,962,896 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:51,197,924...51,212,397
Ensembl chr18:51,197,939...51,212,354 		JBrowse link
G SF3B3 splicing factor 3b subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:76,490,622...76,543,877
Ensembl chr 5:76,490,682...76,543,877 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:59,208,989...59,214,643
Ensembl chr17:59,208,990...59,213,991 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:35,558,249...35,558,998
Ensembl chr 1:35,558,599...35,558,859 		JBrowse link
G SF3B6 splicing factor 3b subunit 6 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:18,548,633...18,559,694
Ensembl chr17:18,548,622...18,704,161 		JBrowse link
G SNRNP25 small nuclear ribonucleoprotein U11/U12 subunit 25 part_of IBA GO_Central GO_REF:0000033 NCBI chr 6:40,414,073...40,416,985
Ensembl chr 6:40,414,370...40,416,873 		JBrowse link
G SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr35:7,529,115...7,546,483
Ensembl chr35:7,529,159...7,545,620 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO (PMID:15146077) UniProt PMID:15146077 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO (PMID:15146077) UniProt PMID:15146077 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E part_of ISO (PMID:15146077) UniProt PMID:15146077 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F part_of ISO (PMID:15146077) UniProt PMID:15146077 NCBI chr15:35,691,071...35,698,734 JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of IBA GO_Central GO_REF:0000033 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G YBX1 Y-box binding protein 1 part_of ISO (PMID:15146077) UniProt PMID:15146077 NCBI chr15:646,301...666,347
Ensembl chr15:646,584...666,329 		JBrowse link
G ZCRB1 zinc finger CCHC-type and RNA binding motif containing 1 part_of IEA
IBA		 Ensembl
GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 NCBI chr27:11,590,152...11,605,079
Ensembl chr27:11,590,332...11,604,986 		JBrowse link
G ZMAT5 zinc finger matrin-type 5 part_of ISO (PMID:15146077) HGNC-UCL PMID:15146077 NCBI chr26:22,926,327...22,953,189
Ensembl chr26:22,926,554...22,940,725 		JBrowse link
G ZRSR2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr  X:12,046,163...12,073,617
Ensembl chr  X:12,046,921...12,073,440 		JBrowse link
U2-type catalytic step 1 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASC3 CASC3 exon junction complex subunit part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:22,403,139...22,427,475
Ensembl chr 9:22,405,336...22,427,426 		JBrowse link
G CWC22 CWC22 spliceosome associated protein homolog part_of IEA Ensembl GO_REF:0000107 NCBI chr36:23,355,501...23,415,059
Ensembl chr36:23,168,979...23,397,045 		JBrowse link
G CWC25 CWC25 spliceosome associated protein homolog part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:23,426,005...23,443,512
Ensembl chr 9:23,426,038...23,443,040 		JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:1,582,950...1,593,893
Ensembl chr 9:1,582,993...1,593,892 		JBrowse link
G ISY1 ISY1 splicing factor homolog part_of IEA Ensembl GO_REF:0000107 NCBI chr20:2,945,636...2,972,245
Ensembl chr20:2,945,720...2,972,245 		JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit part_of ISO (PMID:29301961) UniProt PMID:29301961 NCBI chr27:35,125,786...35,133,372 JBrowse link
G PRPF19 pre-mRNA processing factor 19 part_of IBA GO_Central GO_REF:0000033 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:45,797,882...45,827,365
Ensembl chr 9:45,797,959...45,828,071 		JBrowse link
G RBM22 RNA binding motif protein 22 part_of IBA GO_Central GO_REF:0000033 NCBI chr 4:58,460,805...58,470,411
Ensembl chr 4:58,460,847...58,469,762 		JBrowse link
G RBM8A RNA binding motif protein 8A part_of IEA Ensembl GO_REF:0000107 NCBI chr17:58,722,449...58,726,017
Ensembl chr17:58,724,227...58,725,969 		JBrowse link
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 part_of ISO (PMID:29301961) UniProt PMID:29301961 NCBI chr17:34,472,638...34,505,332
Ensembl chr17:34,472,767...34,505,333 		JBrowse link
G YJU2 YJU2 splicing factor homolog part_of IEA
IBA		 UniProt
GO_Central
Ensembl		 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 NCBI chr20:55,367,512...55,380,755
Ensembl chr20:55,368,480...55,380,679 		JBrowse link
U2-type catalytic step 2 spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AQR aquarius intron-binding spliceosomal factor part_of IEA Ensembl GO_REF:0000107 NCBI chr30:2,571,359...2,670,715
Ensembl chr30:2,571,554...2,670,597 		JBrowse link
G BCAS2 BCAS2 pre-mRNA processing factor part_of IEA Ensembl GO_REF:0000107 NCBI chr17:52,277,677...52,291,150
Ensembl chr17:52,277,804...52,291,022 		JBrowse link
G BUD31 BUD31 homolog part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr 6:10,169,422...10,178,231 JBrowse link
G CDC40 cell division cycle 40 part_of IEA Ensembl GO_REF:0000107 NCBI chr12:66,897,953...66,950,131
Ensembl chr12:66,897,412...66,949,366 		JBrowse link
G CDC5L cell division cycle 5 like part_of IEA Ensembl GO_REF:0000107 NCBI chr12:12,779,936...12,822,978
Ensembl chr12:12,780,010...12,822,801 		JBrowse link
G CRNKL1 crooked neck pre-mRNA splicing factor 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr24:3,294,607...3,310,846
Ensembl chr24:3,294,616...3,310,702 		JBrowse link
G CWC15 CWC15 spliceosome associated protein homolog part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr21:6,037,305...6,049,124
Ensembl chr21:6,038,656...6,048,400 		JBrowse link
G CWC22 CWC22 spliceosome associated protein homolog part_of IEA Ensembl GO_REF:0000107 NCBI chr36:23,355,501...23,415,059
Ensembl chr36:23,168,979...23,397,045 		JBrowse link
G DHX8 DEAH-box helicase 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:19,734,356...19,766,212
Ensembl chr 9:19,729,816...19,766,555 		JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:18,585,918...18,631,743
Ensembl chr 9:18,585,971...18,635,570 		JBrowse link
G LOC478184 pre-mRNA-splicing factor SYF2 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr 2:74,573,023...74,580,061 JBrowse link
G PLRG1 pleiotropic regulator 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr15:52,196,998...52,213,378
Ensembl chr15:52,198,635...52,213,239 		JBrowse link
G PPIE peptidylprolyl isomerase E part_of IEA Ensembl GO_REF:0000107 NCBI chr15:3,156,067...3,173,028
Ensembl chr15:3,153,628...3,172,988 		JBrowse link
G PPIL1 peptidylprolyl isomerase like 1 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr12:5,916,524...5,936,276
Ensembl chr12:5,917,228...5,942,943 		JBrowse link
G PRPF19 pre-mRNA processing factor 19 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:55,389,902...55,400,241
Ensembl chr18:55,389,897...55,400,240 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:45,797,882...45,827,365
Ensembl chr 9:45,797,959...45,828,071 		JBrowse link
G RBM22 RNA binding motif protein 22 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:58,460,805...58,470,411
Ensembl chr 4:58,460,847...58,469,762 		JBrowse link
G SNRNP40 small nuclear ribonucleoprotein U5 subunit 40 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:69,721,065...69,761,306
Ensembl chr 2:69,721,087...69,804,165 		JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr 3:39,777,947...39,791,256
Ensembl chr 3:39,777,987...39,790,849 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229 		JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr24:6,106,217...6,117,369
Ensembl chr24:6,106,217...6,117,369 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr15:35,691,071...35,698,734 JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G SNW1 SNW domain containing 1 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr 8:50,478,924...50,512,360
Ensembl chr 8:50,479,338...50,512,243 		JBrowse link
G SRRM2 serine/arginine repetitive matrix 2 part_of ISO (PMID:28076346) UniProt PMID:28076346 NCBI chr 6:38,291,847...38,310,624
Ensembl chr 6:38,291,842...38,393,924 		JBrowse link
G XAB2 XPA binding protein 2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr20:52,392,521...52,406,071
Ensembl chr20:52,392,566...52,405,997 		JBrowse link
U2-type post-mRNA release spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX15 DEAH-box helicase 15 part_of
located_in		 IEA
ISO		 (PMID:19103666) Ensembl
UniProt		 PMID:19103666 GO_REF:0000107 NCBI chr 3:85,549,946...85,609,598
Ensembl chr 3:85,549,981...85,609,612 		JBrowse link
G GCFC2 GC-rich sequence DNA-binding factor 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:47,629,511...47,677,017
Ensembl chr17:47,629,577...47,676,328 		JBrowse link
G TFIP11 tuftelin interacting protein 11 part_of ISS
IBA
IEA		 UniProt
GO_Central
Ensembl		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr26:20,177,896...20,192,466
Ensembl chr26:20,177,904...20,192,469 		JBrowse link
U2-type post-spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRPF18 pre-mRNA processing factor 18 part_of IBA GO_Central GO_REF:0000033 NCBI chr 2:22,868,184...22,922,647 JBrowse link
U2-type precatalytic spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BUD13 BUD13 homolog part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:16,789,297...16,862,933
Ensembl chr 5:16,789,313...16,888,894 		JBrowse link
G CWC22 CWC22 spliceosome associated protein homolog part_of IEA Ensembl GO_REF:0000107 NCBI chr36:23,355,501...23,415,059
Ensembl chr36:23,168,979...23,397,045 		JBrowse link
G CWC27 CWC27 spliceosome associated cyclophilin part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:50,654,977...50,847,055
Ensembl chr 2:50,655,037...50,846,604 		JBrowse link
G DHX16 DEAH-box helicase 16 part_of IEA Ensembl GO_REF:0000107 NCBI chr12:460,669...478,026
Ensembl chr12:460,713...478,001 		JBrowse link
G EFTUD2 elongation factor Tu GTP binding domain containing 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:18,585,918...18,631,743
Ensembl chr 9:18,585,971...18,635,570 		JBrowse link
G IK IK cytokine part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:35,805,631...35,818,205
Ensembl chr 2:35,805,689...35,818,050 		JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA Ensembl GO_REF:0000107 NCBI chr12:1,270,328...1,279,269 JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA Ensembl GO_REF:0000107 NCBI chr20:4,328,930...4,342,731
Ensembl chr20:4,329,038...4,342,859 		JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IEA Ensembl GO_REF:0000107 NCBI chr20:44,707,460...44,720,490
Ensembl chr20:44,707,460...44,720,490 		JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr14:44,857,882...44,860,929
Ensembl chr14:44,857,930...44,860,821 		JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr15:44,651,830...44,666,418
Ensembl chr15:44,651,830...44,666,418 		JBrowse link
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr20:56,730,476...56,735,115
Ensembl chr20:56,730,486...56,735,112 		JBrowse link
G LSM8 LSM8 homolog, U6 small nuclear RNA associated part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr14:56,908,344...56,916,512 JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit part_of ISO (PMID:28502770) UniProt PMID:28502770 NCBI chr27:35,125,786...35,133,372 JBrowse link
G MFAP1 microfibril associated protein 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr30:10,545,987...10,559,507
Ensembl chr30:10,546,369...10,559,414 		JBrowse link
G PHF5A PHD finger protein 5A part_of IEA Ensembl GO_REF:0000107 NCBI chr10:23,798,854...23,809,024
Ensembl chr10:23,798,969...23,808,865 		JBrowse link
G PRPF3 pre-mRNA processing factor 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:59,552,227...59,577,027
Ensembl chr17:59,552,340...59,577,009 		JBrowse link
G PRPF31 pre-mRNA processing factor 31 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:103,073,359...103,090,652
Ensembl chr 1:103,073,380...103,090,652 		JBrowse link
G PRPF38A pre-mRNA processing factor 38A part_of IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chr15:8,950,621...8,965,205
Ensembl chr15:8,950,805...8,965,085 		JBrowse link
G PRPF4 pre-mRNA splicing tri-snRNP complex factor PRPF4 part_of IEA Ensembl GO_REF:0000107 NCBI chr11:67,641,332...67,659,070
Ensembl chr11:67,641,459...67,657,870 		JBrowse link
G PRPF6 pre-mRNA processing factor 6 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:47,439,210...47,483,531
Ensembl chr24:47,433,130...47,483,522 		JBrowse link
G PRPF8 pre-mRNA processing factor 8 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:45,797,882...45,827,365
Ensembl chr 9:45,797,959...45,828,071 		JBrowse link
G RBMX2 RNA binding motif protein X-linked 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr  X:101,533,732...101,547,147
Ensembl chr  X:101,533,835...101,544,552 		JBrowse link
G RNF113A ring finger protein 113A part_of ISO (PMID:29360106) UniProt PMID:29360106 NCBI chr  X:91,884,757...91,885,998
Ensembl chr  X:91,884,808...91,885,854 		JBrowse link
G SART1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP part_of IEA Ensembl GO_REF:0000107 NCBI chr18:51,297,419...51,313,804
Ensembl chr18:51,297,419...51,313,793 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr26:23,485,551...23,504,242
Ensembl chr26:23,485,797...23,504,346 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:56,789,450...56,796,004
Ensembl chr20:56,788,577...56,795,262 		JBrowse link
G SF3A3 splicing factor 3a subunit 3 part_of ISO (PMID:29360106), (PMID:8022796) UniProt PMID:8022796 PMID:29360106 NCBI chr15:4,595,812...4,620,565 JBrowse link
G SF3B1 splicing factor 3b subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr37:6,922,150...6,962,474
Ensembl chr37:6,924,047...6,962,896 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr18:51,197,924...51,212,397
Ensembl chr18:51,197,939...51,212,354 		JBrowse link
G SF3B3 splicing factor 3b subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:76,490,622...76,543,877
Ensembl chr 5:76,490,682...76,543,877 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:59,208,989...59,214,643
Ensembl chr17:59,208,990...59,213,991 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:35,558,249...35,558,998
Ensembl chr 1:35,558,599...35,558,859 		JBrowse link
G SMU1 SMU1 DNA replication regulator and spliceosomal factor part_of IEA Ensembl GO_REF:0000107 NCBI chr11:50,172,679...50,195,719
Ensembl chr11:50,174,153...50,195,644 		JBrowse link
G SNIP1 Smad nuclear interacting protein 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr15:4,924,035...4,934,565
Ensembl chr15:4,924,178...4,933,724 		JBrowse link
G SNRNP200 small nuclear ribonucleoprotein U5 subunit 200 part_of ISO (PMID:29361316) UniProt PMID:29361316 NCBI chr17:34,472,638...34,505,332
Ensembl chr17:34,472,767...34,505,333 		JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr 3:39,777,947...39,791,256
Ensembl chr 3:39,777,987...39,790,849 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229 		JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr24:6,106,217...6,117,369
Ensembl chr24:6,106,217...6,117,369 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr15:35,691,071...35,698,734 JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G SNU13 small nuclear ribonucleoprotein 13 part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr10:23,622,897...23,631,526
Ensembl chr10:23,618,293...23,631,004 		JBrowse link
G SRRM2 serine/arginine repetitive matrix 2 part_of ISO (PMID:29361316) UniProt PMID:29361316 NCBI chr 6:38,291,847...38,310,624
Ensembl chr 6:38,291,842...38,393,924 		JBrowse link
G TXNL4A thioredoxin like 4A part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:722,223...735,253
Ensembl chr 1:722,293...735,258 		JBrowse link
G WBP4 WW domain binding protein 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr22:9,504,525...9,565,230
Ensembl chr22:9,505,012...9,565,208 		JBrowse link
G ZMAT2 zinc finger matrin-type 2 part_of ISO (PMID:28781166) UniProt PMID:28781166 NCBI chr 2:35,851,972...35,860,818
Ensembl chr 2:35,852,109...35,858,065 		JBrowse link
U2-type prespliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDX42 DEAD-box helicase 42 part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:11,737,629...11,774,515
Ensembl chr 9:11,737,430...11,773,625 		JBrowse link
G LOC100682636 U1 small nuclear ribonucleoprotein C-like part_of IEA UniProt GO_REF:0000104 NCBI chr33:10,139,384...10,139,966 JBrowse link
G LOC100856126 U1 small nuclear ribonucleoprotein C-like part_of IEA UniProt GO_REF:0000104 NCBI chr 7:26,039,248...26,039,982 JBrowse link
G LOC102154571 U1 small nuclear ribonucleoprotein C-like part_of IEA UniProt GO_REF:0000104 NCBI chr 3:72,361,077...72,363,844 JBrowse link
G LOC111098242 small nuclear ribonucleoprotein G-like part_of IBA GO_Central GO_REF:0000033 NCBI chr12:6,244,678...6,245,140 JBrowse link
G LOC119877863 U1 small nuclear ribonucleoprotein C part_of IEA UniProt GO_REF:0000104
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated part_of IBA GO_Central GO_REF:0000033 NCBI chr20:56,730,476...56,735,115
Ensembl chr20:56,730,486...56,735,112 		JBrowse link
G LUC7L LUC7 like part_of IBA GO_Central GO_REF:0000033 NCBI chr 6:40,274,290...40,310,084
Ensembl chr 6:40,273,801...40,309,921 		JBrowse link
G LUC7L2 LUC7-like 2 (S. cerevisiae) part_of IBA GO_Central GO_REF:0000033 NCBI chr16:9,342,792...9,404,797
Ensembl chr16:9,342,894...9,404,797 		JBrowse link
G LUC7L3 LUC7 like 3 pre-mRNA splicing factor part_of IBA GO_Central GO_REF:0000033 NCBI chr 9:26,621,019...26,648,049
Ensembl chr 9:26,621,061...26,815,203 		JBrowse link
G PRPF39 pre-mRNA processing factor 39 part_of IBA GO_Central GO_REF:0000033 NCBI chr 8:22,510,816...22,549,481
Ensembl chr 8:22,511,329...22,549,226 		JBrowse link
G PRPF40A pre-mRNA processing factor 40 homolog A part_of IBA GO_Central GO_REF:0000033 NCBI chr19:53,649,424...53,710,095
Ensembl chr19:53,651,453...53,710,633
Ensembl chr19:53,651,453...53,710,633 		JBrowse link
G PRPF40B pre-mRNA processing factor 40 homolog B part_of IBA GO_Central GO_REF:0000033 NCBI chr27:5,017,861...5,038,033
Ensembl chr27:5,018,060...5,038,119 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr26:23,485,551...23,504,242
Ensembl chr26:23,485,797...23,504,346 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 part_of IBA GO_Central GO_REF:0000033 NCBI chr20:56,789,450...56,796,004
Ensembl chr20:56,788,577...56,795,262 		JBrowse link
G SNRNP70 small nuclear ribonucleoprotein U1 subunit 70 part_of IBA GO_Central GO_REF:0000033 NCBI chr 1:107,340,484...107,356,280
Ensembl chr 1:107,113,974...107,356,241 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 part_of IBA GO_Central GO_REF:0000033 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229 		JBrowse link
G SNRPC small nuclear ribonucleoprotein polypeptide C part_of IEA UniProt GO_REF:0000104 NCBI chr12:3,996,483...4,010,904
Ensembl chr12:3,996,520...4,010,889 		JBrowse link
G SNRPC part_of IEA UniProt GO_REF:0000104
G SNRPC part_of IEA UniProt GO_REF:0000104
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of IBA GO_Central GO_REF:0000033 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G SNRPN small nuclear ribonucleoprotein polypeptide N part_of IBA GO_Central GO_REF:0000033 NCBI chr 3:35,837,582...35,842,925
Ensembl chr 3:35,837,468...35,862,877 		JBrowse link
G U2AF2 U2 small nuclear RNA auxiliary factor 2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:102,074,759...102,091,326
Ensembl chr 1:102,074,790...102,091,385 		JBrowse link
U2-type spliceosomal complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BUD13 BUD13 homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr 5:16,789,297...16,862,933
Ensembl chr 5:16,789,313...16,888,894 		JBrowse link
G CCDC12 coiled-coil domain containing 12 part_of IBA GO_Central GO_REF:0000033 NCBI chr20:41,838,497...41,889,902
Ensembl chr20:41,834,095...41,890,482 		JBrowse link
G CWC25 CWC25 spliceosome associated protein homolog part_of IBA GO_Central GO_REF:0000033 NCBI chr 9:23,426,005...23,443,512
Ensembl chr 9:23,426,038...23,443,040 		JBrowse link
G DDX46 DEAD-box helicase 46 part_of ISO (PMID:32494006), (PMID:34822310), (PMID:36797247) UniProt PMID:32494006 PMID:34822310 PMID:36797247 NCBI chr11:22,834,843...22,906,976
Ensembl chr11:22,833,926...22,905,964 		JBrowse link
G HTATSF1 HIV-1 Tat specific factor 1 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:106,848,455...106,866,540
Ensembl chr  X:106,848,455...106,866,540 		JBrowse link
G LOC119874741 splicing factor 3B subunit 6 part_of IEA Ensembl GO_REF:0000107
G MFAP1 microfibril associated protein 1 part_of IBA GO_Central GO_REF:0000033 NCBI chr30:10,545,987...10,559,507
Ensembl chr30:10,546,369...10,559,414 		JBrowse link
G PHF5A PHD finger protein 5A part_of IEA Ensembl GO_REF:0000107 NCBI chr10:23,798,854...23,809,024
Ensembl chr10:23,798,969...23,808,865 		JBrowse link
G RNF113A ring finger protein 113A part_of IBA GO_Central GO_REF:0000033 NCBI chr  X:91,884,757...91,885,998
Ensembl chr  X:91,884,808...91,885,854 		JBrowse link
G SF3A1 splicing factor 3a subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr26:23,485,551...23,504,242
Ensembl chr26:23,485,797...23,504,346 		JBrowse link
G SF3A2 splicing factor 3a subunit 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr20:56,789,450...56,796,004
Ensembl chr20:56,788,577...56,795,262 		JBrowse link
G SF3A3 splicing factor 3a subunit 3 part_of ISO (PMID:32494006), (PMID:34822310), (PMID:36797247)
(PMID:10882114)		 UniProt
ComplexPortal		 PMID:10882114 PMID:32494006 PMID:34822310 PMID:36797247 NCBI chr15:4,595,812...4,620,565 JBrowse link
G SF3B1 splicing factor 3b subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr37:6,922,150...6,962,474
Ensembl chr37:6,924,047...6,962,896 		JBrowse link
G SF3B2 splicing factor 3b subunit 2 part_of IEA
IBA		 Ensembl
GO_Central		 GO_REF:0000033 GO_REF:0000107 NCBI chr18:51,197,924...51,212,397
Ensembl chr18:51,197,939...51,212,354 		JBrowse link
G SF3B3 splicing factor 3b subunit 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:76,490,622...76,543,877
Ensembl chr 5:76,490,682...76,543,877 		JBrowse link
G SF3B4 splicing factor 3b subunit 4 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:59,208,989...59,214,643
Ensembl chr17:59,208,990...59,213,991 		JBrowse link
G SF3B5 splicing factor 3b subunit 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:35,558,249...35,558,998
Ensembl chr 1:35,558,599...35,558,859 		JBrowse link
G SF3B6 splicing factor 3b subunit 6 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:18,548,633...18,559,694
Ensembl chr17:18,548,622...18,704,161 		JBrowse link
G SNRPA1 small nuclear ribonucleoprotein polypeptide A' part_of ISO (PMID:32494006), (PMID:36797247) UniProt PMID:32494006 PMID:36797247 NCBI chr 3:39,777,947...39,791,256
Ensembl chr 3:39,777,987...39,790,849 		JBrowse link
G SNRPB small nuclear ribonucleoprotein polypeptides B and B1 part_of IEA Ensembl GO_REF:0000107 NCBI chr24:18,673,975...18,683,315
Ensembl chr24:18,674,039...18,683,229 		JBrowse link
G SNRPB2 small nuclear ribonucleoprotein polypeptide B2 part_of ISO (PMID:32494006), (PMID:36797247) UniProt PMID:32494006 PMID:36797247 NCBI chr24:6,106,217...6,117,369
Ensembl chr24:6,106,217...6,117,369 		JBrowse link
G SNRPD1 small nuclear ribonucleoprotein D1 polypeptide part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:66,407,313...66,421,193
Ensembl chr 7:66,407,313...66,421,194 		JBrowse link
G SNRPD2 small nuclear ribonucleoprotein D2 polypeptide part_of ISO (PMID:32494006), (PMID:36797247) UniProt PMID:32494006 PMID:36797247 NCBI chr 1:109,891,253...109,896,712
Ensembl chr 1:109,891,223...109,896,711 		JBrowse link
G SNRPD3 small nuclear ribonucleoprotein D3 polypeptide part_of ISO (PMID:32494006), (PMID:36797247) UniProt PMID:32494006 PMID:36797247 NCBI chr26:28,247,878...28,263,519 JBrowse link
G SNRPE small nuclear ribonucleoprotein polypeptide E part_of ISO (PMID:32494006), (PMID:36797247) UniProt PMID:32494006 PMID:36797247 NCBI chr38:515,808...521,536
Ensembl chr38:515,860...521,535 		JBrowse link
G SNRPF small nuclear ribonucleoprotein polypeptide F part_of ISO (PMID:32494006), (PMID:36797247) UniProt PMID:32494006 PMID:36797247 NCBI chr15:35,691,071...35,698,734 JBrowse link
G SNRPG small nuclear ribonucleoprotein polypeptide G part_of ISO (PMID:32494006), (PMID:36797247) UniProt PMID:32494006 PMID:36797247 NCBI chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755
Ensembl chr10:68,826,250...68,836,755 		JBrowse link
G YJU2B YJU2 splicing factor homolog B part_of IBA GO_Central GO_REF:0000033 NCBI chr20:48,659,426...48,671,771
Ensembl chr20:48,659,652...48,669,329 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 23074
    protein-containing complex 9442
      nuclear protein-containing complex 4368
        spliceosomal complex 221
          U12-type spliceosomal complex + 28
          U2-type spliceosomal complex + 101
          catalytic step 1 spliceosome + 12
          catalytic step 2 spliceosome + 98
          post-mRNA release spliceosomal complex + 11
          post-spliceosomal complex + 2
          precatalytic spliceosome + 60
          prespliceosome + 23
          supraspliceosomal complex 4
          trans spliceosomal complex 0
Path 2
Term Annotations click to browse term
  cellular_component 23074
    cellular anatomical structure 22784
      organelle 17402
        membrane-bounded organelle 16136
          intracellular membrane-bounded organelle 15597
            nucleus 11281
              nuclear protein-containing complex 4368
                spliceosomal complex 221
                  U12-type spliceosomal complex + 28
                  U2-type spliceosomal complex + 101
                  catalytic step 1 spliceosome + 12
                  catalytic step 2 spliceosome + 98
                  post-mRNA release spliceosomal complex + 11
                  post-spliceosomal complex + 2
                  precatalytic spliceosome + 60
                  prespliceosome + 23
                  supraspliceosomal complex 4
                  trans spliceosomal complex 0
paths to the root