EFTUD2 (elongation factor Tu GTP binding domain containing 2) - Rat Genome Database

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Gene: EFTUD2 (elongation factor Tu GTP binding domain containing 2) Canis lupus familiaris
Analyze
Symbol: EFTUD2
Name: elongation factor Tu GTP binding domain containing 2
RGD ID: 12412700
Description: ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); response to cocaine (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colon cancer (ortholog); Developmental Disabilities (ortholog); esophageal atresia (ortholog); FOUND IN Cajal body (inferred); catalytic step 2 spliceosome (inferred); cytosol (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 116 kDa U5 small nuclear ribonucleoprotein component
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1918,585,918 - 18,631,743 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl918,585,971 - 18,635,570 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha917,971,321 - 18,017,098 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0919,259,323 - 19,325,865 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl919,259,393 - 19,325,861 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1918,136,941 - 18,182,419 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0918,315,956 - 18,361,505 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0918,472,819 - 18,518,366 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
EFTUD2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1918,585,918 - 18,631,743 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl918,585,971 - 18,635,570 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha917,971,321 - 18,017,098 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0919,259,323 - 19,325,865 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl919,259,393 - 19,325,861 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1918,136,941 - 18,182,419 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0918,315,956 - 18,361,505 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0918,472,819 - 18,518,366 (+)NCBIUU_Cfam_GSD_1.0
EFTUD2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381744,849,948 - 44,899,445 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1744,849,948 - 44,899,445 (-)EnsemblGRCh38hg38GRCh38
GRCh371742,927,316 - 42,976,813 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361740,283,805 - 40,332,289 (-)NCBINCBI36Build 36hg18NCBI36
Celera1739,638,156 - 39,687,497 (-)NCBICelera
Cytogenetic Map17q21.31NCBI
HuRef1738,692,747 - 38,742,046 (-)NCBIHuRef
CHM1_11743,163,795 - 43,213,134 (-)NCBICHM1_1
T2T-CHM13v2.01745,703,842 - 45,753,329 (-)NCBIT2T-CHM13v2.0
Eftud2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911102,729,298 - 102,771,999 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11102,729,299 - 102,771,811 (-)EnsemblGRCm39 Ensembl
GRCm3811102,838,472 - 102,880,984 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11102,838,473 - 102,880,985 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711102,699,786 - 102,742,289 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611102,654,567 - 102,697,007 (-)NCBIMGSCv36mm8
Celera11114,550,212 - 114,592,043 (-)NCBICelera
Cytogenetic Map11E1NCBI
cM Map1166.48NCBI
Eftud2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81088,304,992 - 88,352,229 (-)NCBIGRCr8
mRatBN7.21087,804,893 - 87,852,181 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1087,804,892 - 87,846,079 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1092,841,414 - 92,882,147 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01092,307,399 - 92,348,557 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01087,700,735 - 87,741,903 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01090,932,071 - 90,983,971 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1090,932,075 - 90,983,928 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01090,705,838 - 90,756,354 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41092,012,161 - 92,053,043 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1086,508,787 - 86,548,578 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Eftud2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545117,653,125 - 17,690,117 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545117,655,659 - 17,690,117 (-)NCBIChiLan1.0ChiLan1.0
EFTUD2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21919,933,391 - 19,982,558 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11721,901,941 - 21,951,118 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01712,423,198 - 12,472,462 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11712,595,715 - 12,644,147 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1712,595,715 - 12,644,147 (+)Ensemblpanpan1.1panPan2
Eftud2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560217,935,177 - 17,978,014 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365411,217,138 - 1,257,935 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365411,216,584 - 1,259,355 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EFTUD2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1218,474,097 - 18,517,479 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11218,474,367 - 18,514,993 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21218,719,238 - 18,759,628 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EFTUD2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11661,505,796 - 61,549,720 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1661,505,825 - 61,551,890 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607732,254,817 - 32,301,049 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Eftud2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624795407,598 - 438,734 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624795407,228 - 435,578 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in EFTUD2
433 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005624382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005624383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038676226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_548058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000022358   ⟹   ENSCAFP00000020765
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl918,585,971 - 18,635,570 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000073179   ⟹   ENSCAFP00000066157
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl918,585,971 - 18,631,727 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012275   ⟹   ENSCAFP00845009595
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,259,393 - 19,325,861 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012373   ⟹   ENSCAFP00845009673
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,263,501 - 19,325,846 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012434   ⟹   ENSCAFP00845009718
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,263,501 - 19,325,846 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012528   ⟹   ENSCAFP00845009787
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,263,501 - 19,325,839 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012579   ⟹   ENSCAFP00845009822
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,263,501 - 19,325,839 (+)Ensembl
RefSeq Acc Id: XM_005624382   ⟹   XP_005624439
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1918,586,033 - 18,631,743 (+)NCBI
Dog10K_Boxer_Tasha917,971,475 - 18,016,717 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005624383   ⟹   XP_005624440
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1918,586,068 - 18,631,743 (+)NCBI
Dog10K_Boxer_Tasha917,971,503 - 18,016,717 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038485295   ⟹   XP_038341223
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,141,149 - 18,182,419 (+)NCBI
RefSeq Acc Id: XM_038485296   ⟹   XP_038341224
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,136,941 - 18,182,046 (+)NCBI
RefSeq Acc Id: XM_038485297   ⟹   XP_038341225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,137,095 - 18,182,046 (+)NCBI
RefSeq Acc Id: XM_038485298   ⟹   XP_038341226
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,137,123 - 18,182,046 (+)NCBI
RefSeq Acc Id: XM_038547070   ⟹   XP_038402998
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0918,477,011 - 18,518,366 (+)NCBI
RefSeq Acc Id: XM_038547071   ⟹   XP_038402999
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0918,472,819 - 18,517,993 (+)NCBI
RefSeq Acc Id: XM_038547072   ⟹   XP_038403000
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0918,472,973 - 18,517,993 (+)NCBI
RefSeq Acc Id: XM_038547074   ⟹   XP_038403002
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0918,473,001 - 18,517,993 (+)NCBI
RefSeq Acc Id: XM_038611024   ⟹   XP_038466952
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,320,151 - 18,361,505 (+)NCBI
RefSeq Acc Id: XM_038611025   ⟹   XP_038466953
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,315,956 - 18,361,132 (+)NCBI
RefSeq Acc Id: XM_038611026   ⟹   XP_038466954
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,316,110 - 18,361,132 (+)NCBI
RefSeq Acc Id: XM_038611027   ⟹   XP_038466955
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,316,138 - 18,361,132 (+)NCBI
RefSeq Acc Id: XM_038629088   ⟹   XP_038485016
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha917,975,492 - 18,017,098 (+)NCBI
RefSeq Acc Id: XM_038676226   ⟹   XP_038532154
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0919,259,323 - 19,325,865 (+)NCBI
RefSeq Acc Id: XM_548058   ⟹   XP_548058
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1918,585,918 - 18,631,743 (+)NCBI
Dog10K_Boxer_Tasha917,971,321 - 18,016,717 (+)NCBI
Sequence:
RefSeq Acc Id: XP_548058   ⟸   XM_548058
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8C0K988 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005624439   ⟸   XM_005624382
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8C0K988 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005624440   ⟸   XM_005624383
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8C0K988 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000066157   ⟸   ENSCAFT00000073179
Ensembl Acc Id: ENSCAFP00000020765   ⟸   ENSCAFT00000022358
RefSeq Acc Id: XP_038341224   ⟸   XM_038485296
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038341225   ⟸   XM_038485297
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038341226   ⟸   XM_038485298
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038341223   ⟸   XM_038485295
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038466953   ⟸   XM_038611025
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038466954   ⟸   XM_038611026
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038466955   ⟸   XM_038611027
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038466952   ⟸   XM_038611024
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038532154   ⟸   XM_038676226
- Peptide Label: isoform X1
- UniProtKB: A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8C0K988 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038485016   ⟸   XM_038629088
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8C0K988 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038402999   ⟸   XM_038547071
- Peptide Label: isoform X4
- UniProtKB: A0A8C0K988 (UniProtKB/TrEMBL),   A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038403000   ⟸   XM_038547072
- Peptide Label: isoform X4
- UniProtKB: A0A8C0K988 (UniProtKB/TrEMBL),   A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038403002   ⟸   XM_038547074
- Peptide Label: isoform X4
- UniProtKB: A0A8C0K988 (UniProtKB/TrEMBL),   A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038402998   ⟸   XM_038547070
- Peptide Label: isoform X4
- UniProtKB: A0A8C0K988 (UniProtKB/TrEMBL),   A0A8C0SJ19 (UniProtKB/TrEMBL),   A0A8I3MU66 (UniProtKB/TrEMBL),   A0A8I3N096 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845009718   ⟸   ENSCAFT00845012434
Ensembl Acc Id: ENSCAFP00845009822   ⟸   ENSCAFT00845012579
Ensembl Acc Id: ENSCAFP00845009787   ⟸   ENSCAFT00845012528
Ensembl Acc Id: ENSCAFP00845009595   ⟸   ENSCAFT00845012275
Ensembl Acc Id: ENSCAFP00845009673   ⟸   ENSCAFT00845012373
Protein Domains
tr-type G

Promoters
RGD ID:13684482
Promoter ID:EPDNEW_C2551
Type:initiation region
Name:EFTUD2_1
Description:elongation factor Tu GTP binding domain containing 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1918,586,004 - 18,586,064EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014065 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030003527 UniProtKB/TrEMBL
  ENSCAFG00040013794 UniProtKB/TrEMBL
  ENSCAFG00845006798 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000073179.2 UniProtKB/TrEMBL
  ENSCAFT00030006596.1 UniProtKB/TrEMBL
  ENSCAFT00040025507.1 UniProtKB/TrEMBL
  ENSCAFT00040025711.1 UniProtKB/TrEMBL
  ENSCAFT00845012275.1 UniProtKB/TrEMBL
  ENSCAFT00845012373 ENTREZGENE
  ENSCAFT00845012373.1 UniProtKB/TrEMBL
  ENSCAFT00845012434.1 UniProtKB/TrEMBL
  ENSCAFT00845012528.1 UniProtKB/TrEMBL
  ENSCAFT00845012579.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.230.10 UniProtKB/TrEMBL
  3.30.70.240 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  Elongation Factor G (Translational Gtpase), domain 3 UniProtKB/TrEMBL
  Translation factors UniProtKB/TrEMBL
  Yeast translation eEF2 (G' domain) UniProtKB/TrEMBL
InterPro EFG_II UniProtKB/TrEMBL
  EFG_III/V UniProtKB/TrEMBL
  EFG_V-like UniProtKB/TrEMBL
  EFTu-like_2 UniProtKB/TrEMBL
  EFTUD2_N UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold_subgr UniProtKB/TrEMBL
  Small_GTP-bd_dom UniProtKB/TrEMBL
  Snu114_GTP-bd UniProtKB/TrEMBL
  T_Tr_GTP-bd_dom UniProtKB/TrEMBL
  Transl_B-barrel_sf UniProtKB/TrEMBL
  Transl_elong_EFG/EF2_IV UniProtKB/TrEMBL
  U5-116kDa_C UniProtKB/TrEMBL
KEGG Report cfa:490935 UniProtKB/TrEMBL
NCBI Gene EFTUD2 ENTREZGENE
PANTHER 116 KDA U5 SMALL NUCLEAR RIBONUCLEOPROTEIN COMPONENT UniProtKB/TrEMBL
  TRANSLATION ELONGATION FACTOR-RELATED UniProtKB/TrEMBL
Pfam EFG_C UniProtKB/TrEMBL
  EFG_III UniProtKB/TrEMBL
  EFG_IV UniProtKB/TrEMBL
  EFTUD2 UniProtKB/TrEMBL
  GTP_EFTU UniProtKB/TrEMBL
  GTP_EFTU_D2 UniProtKB/TrEMBL
PRINTS ELONGATNFCT UniProtKB/TrEMBL
PROSITE G_TR_2 UniProtKB/TrEMBL
SMART EFG_C UniProtKB/TrEMBL
  EFG_IV UniProtKB/TrEMBL
Superfamily-SCOP SSF50447 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
  SSF54211 UniProtKB/TrEMBL
  SSF54980 UniProtKB/TrEMBL
UniProt A0A8C0K988 ENTREZGENE
  A0A8C0SJ19 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SJI6_CANLF UniProtKB/TrEMBL
  A0A8I3MU66 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N096 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:40234 ENTREZGENE