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Gene: CRNKL1 (crooked neck pre-mRNA splicing factor 1) Canis lupus familiaris

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Symbol:

CRNKL1

Name:

crooked neck pre-mRNA splicing factor 1

RGD ID:

12269138

Description:

ENCODES a protein that exhibits RNA binding (inferred); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); familial hyperinsulinemic hypoglycemia 1 (ortholog); melanoma (ortholog); FOUND IN catalytic step 2 spliceosome (inferred); nucleus (inferred); spliceosomal complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

crooked neck pre-mRNA splicing factor-like 1; crooked neck-like protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	3,294,607 - 3,310,846 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	3,294,616 - 3,310,702 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	3,322,820 - 3,338,912 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	3,703,030 - 3,719,137 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	3,702,577 - 3,720,541 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	3,298,774 - 3,314,853 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	3,401,816 - 3,417,906 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	3,679,794 - 3,695,883 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

basal cell carcinoma (ISO)

familial hyperinsulinemic hypoglycemia 1 (ISO)

melanoma (ISO)

skin melanoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to brain-derived neurotrophic factor stimulus (ISO)

cellular response to leukemia inhibitory factor (ISO)

cerebral cortex development (ISO)

mRNA processing (IEA)

mRNA splicing, via spliceosome (IEA)

RNA splicing (IEA)

spliceosomal complex assembly (IEA)

Cellular Component

catalytic step 2 spliceosome (IEA)

nucleus (IEA)

spliceosomal complex (IEA)

U2-type catalytic step 2 spliceosome (IEA)

Molecular Function

protein binding (ISO)

RNA binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

spliceosome pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CRNKL1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	3,294,607 - 3,310,846 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	3,294,616 - 3,310,702 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	3,322,820 - 3,338,912 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	3,703,030 - 3,719,137 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	3,702,577 - 3,720,541 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	3,298,774 - 3,314,853 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	3,401,816 - 3,417,906 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	3,679,794 - 3,695,883 (+)	NCBI		UU_Cfam_GSD_1.0

CRNKL1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	20,034,368 - 20,056,046 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	20	20,034,368 - 20,056,046 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	20,015,012 - 20,036,690 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	19,963,012 - 19,984,690 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	19,963,011 - 19,984,690	NCBI
Celera	20	20,089,029 - 20,110,711 (-)	NCBI		Celera
Cytogenetic Map	20	p11.23	NCBI
HuRef	20	19,976,670 - 19,998,362 (-)	NCBI		HuRef
CHM1_1	20	20,015,382 - 20,037,072 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	20,088,648 - 20,110,326 (-)	NCBI		T2T-CHM13v2.0

Crnkl1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	145,759,402 - 145,776,620 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	145,759,399 - 145,776,934 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	145,917,482 - 145,934,700 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	145,917,479 - 145,935,014 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	145,743,218 - 145,760,436 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	145,608,923 - 145,626,141 (-)	NCBI		MGSCv36	mm8
Celera	2	147,153,324 - 147,170,535 (-)	NCBI		Celera
Cytogenetic Map	2	G1	NCBI
cM Map	2	71.28	NCBI

Crnkl1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	153,764,718 - 153,807,973 (-)	NCBI		GRCr8
mRatBN7.2	3	133,338,593 - 133,354,329 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	1,140,615 - 1,142,918 (+)	Ensembl		mRatBN7.2 Ensembl
mRatBN7.2 Ensembl	3	133,337,039 - 133,354,302 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	1,362,744 - 1,365,058 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	1,672,026 - 1,674,340 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	1,196,426 - 1,198,740 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	18,349,226 - 18,351,540 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	18,349,167 - 18,351,536 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	28,249,112 - 28,251,426 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	134,538,940 - 134,554,660 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	6	957,687 - 960,001 (+)	NCBI		Celera
Cytogenetic Map	3	q41	NCBI

Crnkl1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955415	28,158,351 - 28,172,055 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955415	28,158,351 - 28,171,335 (-)	NCBI	ChiLan1.0	ChiLan1.0

CRNKL1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	21	20,924,252 - 20,940,546 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	20	20,919,773 - 20,937,382 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	19,992,092 - 20,010,809 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	19,957,545 - 19,975,809 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	19,959,356 - 19,979,094 (-)	Ensembl	panpan1.1		panPan2

Crnkl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	151,896,734 - 151,919,612 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936485	327,835 - 350,132 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936485	328,077 - 351,323 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CRNKL1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	28,077,707 - 28,111,558 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	28,079,541 - 28,111,871 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	31,810,243 - 31,816,810 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CRNKL1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	49,052,304 - 49,070,600 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	49,054,125 - 49,070,576 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666078	3,838,825 - 3,857,376 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Crnkl1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	20,564,474 - 20,581,716 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	20,565,686 - 20,581,708 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CRNKL1
107 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005634714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022409076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038432975	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038508190	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038571445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038635682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000260	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000024	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000008599 ⟹ ENSCAFP00000007969

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	24	3,294,616 - 3,310,702 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845051207 ⟹ ENSCAFP00845040161

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	24	3,702,577 - 3,720,541 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845051259 ⟹ ENSCAFP00845040204

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	24	3,702,577 - 3,720,541 (+)	Ensembl

RefSeq Acc Id:

XM_005634714 ⟹ XP_005634771

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	24	3,294,607 - 3,310,846 (+)	NCBI
Dog10K_Boxer_Tasha	24	3,322,820 - 3,338,912 (+)	NCBI

Sequence:

show sequence

TCAAAGGTCATGCCAGCAACTTCCGCTTCCTGTTTTGGGATCTCGCTTGTTGTCGGAAATCCCT
GGGATTCTGTCCAGCCCTCGGGGTCTATTTCTGGGGTCCAGGTTGAGTCGCGGTCTTGTGCTGC
AGCCATGGCGGCCTCCACCGCTGCCGGGAAGCAGAGGATTCCCAAAGTGGCGAAGGTGAAAAAC
AAAGCCCCAGCTGAGGTACAGATAACTGCTGAGCAACTCTTAAGAGAAGCTAAAGAAAGAGAAC
TTGAGCTTCTTCCTCCTCCACCTCAACAGAAGATCACAGATGAAGAAGAATTAAATGATTACAA
ACTAAGAAAAAGGAAGACTTTTGAAGATAACATAAGAAAAAACAGGACTGTGATTAGTAACTGG
ATAAAATACGCACAATGGGAAGAGAGTCTAAAGGAGATTCAAAGGGCTCGATCCATATACGAAC
GTGCTTTAGATGTAGACTACCGGAATATTACACTCTGGCTAAAATATGCAGAAATGGAAATGAA
GAATCGCCAGGTCAACCATGCCCGAAATATCTGGGACCGAGCCATAACAACTCTTCCTCGCGTC
AACCAGTTCTGGTACAAGTACACATACATGGAGGAGATGTTGGGAAACATTGCTGGCGCCCGGC
AGGTGTTTGAGCGCTGGATGGAATGGCAGCCTGAGGAGCAAGCCTGGCATTCCTACATAAACTT
TGAGCTGCGATACAAAGAGGTGGATCGGGCCCGCACCATTTATGAACGATTTGTTCTCGTGCAC
CCTGATGTTAAGAACTGGATCAAGTATGCTCGCTTTGAAGAAAAACATGGTTATTTTGCCCATG
CACGGAAAGTGTATGAGAGAGCTGTTGAATTCTTTGGAGATGAACATATGGATGAACACCTTTA
TGTTGCCTTTGCCAAATTTGAAGAAAATCAGAAAGAATTTGAAAGGGTACGAGTGATCTACAAG
TATGCCCTGGATAGAATTTCAAAGCAGGAGGCCCAAGAACTCTTTAAAAACTATACCATCTTTG
AGAAGAAGTTCGGTGATAGGCGGGGTATTGAAGACATCATTGTGAGCAAACGAAGATTCCAGTA
TGAGGAAGAAGTGAAGGCTAATCCACACAATTATGATGCATGGTTTGATTACTTGCGCTTGGTG
GAAAGTGATGCAGAAGCAGAAACCGTTCGAGAAGTCTATGAAAGAGCCATCGCCAATGTGCCAC
CCATTCAAGAGAAGCGGCACTGGAAGCGTTACATCTATCTGTGGGTCAACTATGCACTCTATGA
AGAATTGGAGGCCAAGGATCCCGAGAGGACAAGACAGGTGTATCAAGCTTCTTTGGAATTAATT
CCTCATAAAAAGTTCACGTTTGCCAAGATGTGGTTACTGTACGCACAATTTGAAATAAGACAGA
AAAATTTACCGTTTGCCAGAAGAGCTTTGGGAACTTCCATAGGCAAATGTCCAAAGAACAAGTT
ATTTAAAGGTTACATAGAACTGGAGCTGCAGCTTCGAGAATTTGACAGATGCCGGAAGCTTTAT
GAAAAGTTCTTGGAATTTGGACCTGAGAACTGTACCTCTTGGATTAAATTTGCAGAATTAGAAA
CGATCCTTGGTGATATTGAGAGAGCCCGGGCAATCTACGAGTTAGCCATCAGTCAGCCACGCTT
AGACATGCCGGAGGTGCTTTGGAAATCATACATTGATTTTGAAATTGAGCAGGAAGAAACGGAG
AGAACACGAAATCTTTACCGAAGATTGCTTCAGCGGACACAGCATGTCAAGGTATGGATCAGCT
TTGCACAGTTTGAGCTATCATCAAGGAAAGAAGGAAGTTTGGCTAAATGCAGACAGATTTATGA
AGAGGCTAACAAAACCATGAGGAACTGTGAAGAAAAGGAAGAGAGACTTATGTTGCTGGAATCA
TGGCGAAGCTTTGAAGATGAATTTGGAACAGTATCAGATAAAGAAAGAGTAGACAAACTCATGC
CAGAGAAAGTCAAAAAGAGAAGAAAGGTCCAGGCTGATGATGGGTCTGATGCAGGCTGGGAAGA
GTACTATGATTACATCTTTCCAGAAGATGCTGCCAACCAGCCCAACCTCAAGCTCCTGGCCATG
GCCAAACTTTGGAAGAAACAACAACAGGAAAAGGAGGCTGCCGAGCAAGACCCAGATAAGGACA
TTGATGAGACTGAATCCTGATTTTCTTGTTCATATTGATAAATGTTTTATTATTTTTATAAATT
AATCATTTGGAACTCTTGTGACTCTAAGTTTTTTTACACCTCACCAGTAACGAATTGATTGGAG
TCTTTGATAGCTACTTTTTGAATTATTTTTAAAATGCTCTTGGGGTAAGTGAGGGGTTGGGGGA
TTGCAAGTAAATTTTTCTAACTGCTGGA

hide sequence

RefSeq Acc Id:

XM_038432975 ⟹ XP_038288903

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	24	3,703,030 - 3,719,137 (+)	NCBI

RefSeq Acc Id:

XM_038508190 ⟹ XP_038364118

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	24	3,298,774 - 3,314,853 (+)	NCBI

RefSeq Acc Id:

XM_038571445 ⟹ XP_038427373

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	24	3,679,794 - 3,695,883 (+)	NCBI

RefSeq Acc Id:

XM_038635682 ⟹ XP_038491610

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	24	3,401,816 - 3,417,906 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005634771	(Get FASTA)	NCBI Sequence Viewer
	XP_038288903	(Get FASTA)	NCBI Sequence Viewer
	XP_038364118	(Get FASTA)	NCBI Sequence Viewer
	XP_038427373	(Get FASTA)	NCBI Sequence Viewer
	XP_038491610	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000007969.4
	ENSCAFP00030038235.1
	ENSCAFP00040038774.1
	ENSCAFP00845040161
	ENSCAFP00845040161.1
	ENSCAFP00845040204.1

RefSeq Acc Id:

XP_005634771 ⟸ XM_005634714

- UniProtKB:

A0A8C0Z5N9 (UniProtKB/TrEMBL), A0A8I3Q040 (UniProtKB/TrEMBL), A0A8I3QI81 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MPATSASCFGISLVVGNPWDSVQPSGSISGVQVESRSCAAAMAASTAAGKQRIPKVAKVKNKAP
AEVQITAEQLLREAKERELELLPPPPQQKITDEEELNDYKLRKRKTFEDNIRKNRTVISNWIKY
AQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQF
WYKYTYMEEMLGNIAGARQVFERWMEWQPEEQAWHSYINFELRYKEVDRARTIYERFVLVHPDV
KNWIKYARFEEKHGYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYAL
DRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESD
AEAETVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHK
KFTFAKMWLLYAQFEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKF
LEFGPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTR
NLYRRLLQRTQHVKVWISFAQFELSSRKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRS
FEDEFGTVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKL
WKKQQQEKEAAEQDPDKDIDETES

hide sequence

Ensembl Acc Id:

ENSCAFP00000007969 ⟸ ENSCAFT00000008599

RefSeq Acc Id:

XP_038364118 ⟸ XM_038508190

RefSeq Acc Id:

XP_038491610 ⟸ XM_038635682

RefSeq Acc Id:	XP_038288903 ⟸ XM_038432975
- UniProtKB:	A0A8C0Z5N9 (UniProtKB/TrEMBL), A0A8I3Q040 (UniProtKB/TrEMBL), A0A8I3QI81 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038427373 ⟸ XM_038571445
- UniProtKB:	A0A8C0Z5N9 (UniProtKB/TrEMBL), A0A8I3Q040 (UniProtKB/TrEMBL), A0A8I3QI81 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845040161 ⟸ ENSCAFT00845051207

Ensembl Acc Id:

ENSCAFP00845040204 ⟸ ENSCAFT00845051259

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005333	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030023812	UniProtKB/TrEMBL
	ENSCAFG00040023847	UniProtKB/TrEMBL
	ENSCAFG00845028961	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000008599.5	UniProtKB/TrEMBL
	ENSCAFT00030043806.1	UniProtKB/TrEMBL
	ENSCAFT00040044405.1	UniProtKB/TrEMBL
	ENSCAFT00845051207	ENTREZGENE
	ENSCAFT00845051207.1	UniProtKB/TrEMBL
	ENSCAFT00845051259.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
InterPro	HAT	UniProtKB/TrEMBL
	Syf1-like	UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
KEGG Report	cfa:477137	UniProtKB/TrEMBL
NCBI Gene	CRNKL1	ENTREZGENE
PANTHER	CROOKED NECK-LIKE PROTEIN 1	UniProtKB/TrEMBL
	PTHR11246	UniProtKB/TrEMBL
Pfam	HAT	UniProtKB/TrEMBL
SMART	HAT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48452	UniProtKB/TrEMBL
UniProt	A0A8C0Z5N9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q040	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3QI81	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:39625	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

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Imported Disease Annotations - ClinVar

RGD Manual Annotations