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Gene: RBMX (RNA binding motif protein X-linked) Canis lupus familiaris

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Symbol:

RBMX

Name:

RNA binding motif protein X-linked

RGD ID:

12420318

Description:

ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); membrane protein ectodomain proteolysis (ortholog); mRNA splice site recognition (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal hemophilia A (ortholog); Christianson syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); euchromatin (ortholog); extracellular exosome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

heterogeneous nuclear ribonucleoprotein G; RNA binding motif protein, X-linked; RNA-binding motif protein, X chromosome

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	107,173,599 - 107,182,404 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	107,175,634 - 107,182,347 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	92,994,761 - 93,003,581 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	109,152,874 - 109,161,692 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	109,152,889 - 109,161,685 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	106,293,550 - 106,302,363 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	108,485,256 - 108,494,069 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	108,127,392 - 108,136,215 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBMX	Dog	Spinal Cord Injuries		ISO	Rbmx (Rattus norvegicus)	9068941		RGD	PMID:23180094 and REF_RGD_ID:10053723

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBMX	Dog	autistic disorder		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Autism	ClinVar	PMID:21681106 and PMID:30208311
RBMX	Dog	autosomal hemophilia A		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: AUTOSOMAL HEMOPHILIA A	ClinVar	PMID:31690835
RBMX	Dog	Christianson syndrome		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Christianson syndrome	ClinVar	PMID:15319456 more ...
RBMX	Dog	Chromosome Xq26.3 Duplication Syndrome		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Chromosome Xq26.3 duplication syndrome	ClinVar	PMID:25712922 and PMID:26935837
RBMX	Dog	factor VIII deficiency		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Factor 8 deficiency and congenital	ClinVar	PMID:31690835
RBMX	Dog	genetic disease		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Inborn genetic diseases	ClinVar	PMID:25741868
RBMX	Dog	syndromic X-linked intellectual disability Lubs type		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Lubs type	ClinVar	PMID:25741868
RBMX	Dog	syndromic X-linked intellectual disability Shashi type		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Syndromic X-linked intellectual disability Shashi type	ClinVar	PMID:10677307 more ...
RBMX	Dog	visceral heterotaxy 1		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Heterotaxy more ...	ClinVar	PMID:15319456 more ...
RBMX	Dog	X-linked hyper IgM syndrome		ISO	RBMX (Homo sapiens)	8554872	ClinVar Annotator: match by term: Hyper-IgM syndrome type 1	ClinVar	PMID:15319456 more ...
RBMX	Dog	X-linked mental retardation Gustavson type		ISO	RBMX (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:25741868

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBMX	Dog	syndromic X-linked intellectual disability Shashi type		ISO	RBMX (Homo sapiens)	7240710		OMIM
RBMX	Dog	X-linked mental retardation Gustavson type		ISO	RBMX (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBMX	Dog	cellular response to interleukin-1	involved_in	ISO	RBMX (Homo sapiens)	9068941	PMID:18445477	UniProt	PMID:18445477
RBMX	Dog	membrane protein ectodomain proteolysis	involved_in	ISO	RBMX (Homo sapiens)	9068941	PMID:18445477	UniProt	PMID:18445477
RBMX	Dog	mRNA splice site recognition		ISO	Rbmx (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	positive regulation of DNA-templated transcription		ISO	Rbmx (Rattus norvegicus)	9068941		RGD	PMID:17188681 and REF_RGD_ID:2316835
RBMX	Dog	positive regulation of mRNA splicing, via spliceosome	involved_in	IBA	MGI:106016 more ...	150520179		GO_Central	GO_REF:0000033
RBMX	Dog	positive regulation of transcription by RNA polymerase II	involved_in	ISO	RBMX (Homo sapiens)	9068941	PMID:18541147	UniProt	PMID:18541147
RBMX	Dog	regulation of alternative mRNA splicing, via spliceosome	involved_in	ISO	RBMX (Homo sapiens)	9068941	PMID:12165565 and PMID:12761049	UniProt	PMID:12165565 and PMID:12761049
RBMX	Dog	regulation of postsynapse organization	involved_in	ISO	Rbmx (Rattus norvegicus)	9068941	PMID:22238095	SynGO	PMID:22238095 and REF_RGD_ID:155230714
RBMX	Dog	transcription by RNA polymerase II	involved_in	ISO	RBMX (Homo sapiens)	9068941	PMID:21327109	UniProt	PMID:21327109

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBMX	Dog	catalytic step 2 spliceosome	part_of	ISO	RBMX (Homo sapiens)	9068941	PMID:11991638	UniProt	PMID:11991638
RBMX	Dog	euchromatin	located_in	ISO	RBMX (Homo sapiens)	9068941	PMID:21327109	UniProt	PMID:21327109
RBMX	Dog	extracellular exosome	located_in	ISO	RBMX (Homo sapiens)	9068941	PMID:18445477	UniProt	PMID:18445477
RBMX	Dog	glutamatergic synapse	is_active_in	ISO	Rbmx (Rattus norvegicus)	9068941	PMID:22238095	SynGO	PMID:22238095 and REF_RGD_ID:155230714
RBMX	Dog	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	150520179		UniProt	GO_REF:0000044
RBMX	Dog	organelle	located_in	IEA	ARBA:ARBA00029065	150520179		UniProt	GO_REF:0000117
RBMX	Dog	postsynaptic density	is_active_in	ISO	Rbmx (Rattus norvegicus)	9068941	PMID:22238095	SynGO	PMID:22238095 and REF_RGD_ID:155230714
RBMX	Dog	protein-containing complex	part_of	ISO	RBMX (Homo sapiens)	9068941	PMID:10749975	UniProt	PMID:10749975
RBMX	Dog	ribonucleoprotein complex	part_of	IEA	UniProtKB-KW:KW-0687	150520179		UniProt	GO_REF:0000043
RBMX	Dog	spliceosomal complex	part_of	IBA	PANTHER:PTN000391532 more ...	150520179		GO_Central	GO_REF:0000033
RBMX	Dog	supraspliceosomal complex	part_of	ISO	RBMX (Homo sapiens)	9068941	PMID:19282290	UniProt	PMID:19282290

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBMX	Dog	chromatin binding	enables	ISO	RBMX (Homo sapiens)	9068941	PMID:18541147	UniProt	PMID:18541147
RBMX	Dog	identical protein binding	enables	ISO	RBMX (Homo sapiens)	9068941	PMID:10749975	UniProt	PMID:10749975
RBMX	Dog	identical protein binding	enables	ISO	UniProtKB:P38159	9068941	PMID:25416956 more ...	IntAct	PMID:25416956 more ...
RBMX	Dog	mRNA binding	enables	ISO	RBMX (Homo sapiens)	9068941	PMID:12165565 and PMID:12761049	UniProt	PMID:12165565 and PMID:12761049
RBMX	Dog	nucleic acid binding	enables	IEA	InterPro:IPR003954 and InterPro:IPR035979	150520179		InterPro	GO_REF:0000002
RBMX	Dog	protein binding	enables	ISO	UniProtKB:Q13148	9068941	PMID:32814053	IntAct	PMID:32814053
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P19712-PRO_0000038050	9068941	PMID:24965446	AgBase	PMID:24965446
RBMX	Dog	protein binding	enables	ISO	UniProtKB:Q5VWX1	9068941	PMID:27107012	IntAct	PMID:27107012
RBMX	Dog	protein binding	enables	ISO	UniProtKB:O75525 more ...	9068941	PMID:16189514	IntAct	PMID:16189514
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P98179	9068941	PMID:29892012	IntAct	PMID:29892012
RBMX	Dog	protein binding	enables	ISO	UniProtKB:A6NEQ0 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P62995	9068941	PMID:12165565	UniProt	PMID:12165565
RBMX	Dog	protein binding	enables	ISO	UniProtKB:Q8WWY3	9068941	PMID:25910212	IntAct	PMID:25910212
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P61978	9068941	PMID:21516116	IntAct	PMID:21516116
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P61978 and UniProtKB:P62995	9068941	PMID:22365833	IntAct	PMID:22365833
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P09012 more ...	9068941	PMID:25416956	IntAct	PMID:25416956
RBMX	Dog	protein binding	enables	ISO	UniProtKB:O75525 and UniProtKB:Q07666	9068941	PMID:10332027	UniProt	PMID:10332027
RBMX	Dog	protein binding	enables	ISO	UniProtKB:O75525 more ...	9068941	PMID:10749975	UniProt	PMID:10749975
RBMX	Dog	protein binding	enables	ISO	UniProtKB:Q9NZ08	9068941	PMID:18445477	UniProt	PMID:18445477
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P35637	9068941	PMID:27460707	IntAct	PMID:27460707
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P09012 more ...	9068941	PMID:35271311	IntAct	PMID:35271311
RBMX	Dog	protein binding		ISO	Ythdc1 (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	protein binding	enables	ISO	UniProtKB:Q07666	9068941	PMID:31413325	IntAct	PMID:31413325
RBMX	Dog	protein binding		ISO	Khdrbs3 (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P35637 and UniProtKB:Q07666	9068941	PMID:21988832	IntAct	PMID:21988832
RBMX	Dog	protein binding		ISO	Clk2 (Rattus norvegicus)	9068941	also mCLK2	RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	protein binding		ISO	Safb (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	protein binding		ISO	Khdrbs2 (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	protein binding		ISO	Tra2b (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	protein binding	enables	ISO	UniProtKB:P62937	9068941	PMID:25678563	UniProt	PMID:25678563
RBMX	Dog	protein binding		ISO	Khdrbs1 (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827
RBMX	Dog	protein binding	enables	ISO	UniProtKB:Q9JKL7	9068941	PMID:14559993	IntAct	PMID:14559993
RBMX	Dog	protein domain specific binding	enables	ISO	UniProtKB:P0DJD4	9068941	PMID:10749975	UniProt	PMID:10749975
RBMX	Dog	RNA binding	enables	IEA	InterPro:IPR000504	150520179		InterPro	GO_REF:0000002
RBMX	Dog	RNA binding	enables	IBA	FB:FBgn0003742 more ...	150520179		GO_Central	GO_REF:0000033
RBMX	Dog	RNA binding	enables	IEA	UniProtKB-KW:KW-0694	150520179		UniProt	GO_REF:0000043
RBMX	Dog	RNA binding	enables	IEA	UniRule:UR000414619	150520179		UniProt	GO_REF:0000104
RBMX	Dog	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	ISO	RBMX (Homo sapiens)	9068941	PMID:18541147	UniProt	PMID:18541147
RBMX	Dog	single-stranded RNA binding		ISO	Rbmx (Rattus norvegicus)	9068941		RGD	PMID:19282290 and REF_RGD_ID:2316827

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
RBMX	Dog	spliceosome pathway		ISO	RBMX (Homo sapiens)	9068941		RGD	PMID:17537823 more ...

PMID:22301074	PMID:30032202

RBMX
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	X	107,173,599 - 107,182,404 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	X	107,175,634 - 107,182,347 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	X	92,994,761 - 93,003,581 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	X	109,152,874 - 109,161,692 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	X	109,152,889 - 109,161,685 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	X	106,293,550 - 106,302,363 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	X	108,485,256 - 108,494,069 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	X	108,127,392 - 108,136,215 (-)	NCBI		UU_Cfam_GSD_1.0

RBMX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	X	136,869,192 - 136,880,725 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	X	136,848,004 - 136,880,764 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	X	135,951,351 - 135,962,884 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	X	135,783,285 - 135,790,605 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	X	135,681,138 - 135,688,459	NCBI
Celera	X	136,315,008 - 136,326,547 (-)	NCBI		Celera
Cytogenetic Map	X	q26.3	NCBI
HuRef	X	125,221,196 - 125,232,578 (-)	NCBI		HuRef
CHM1_1	X	135,863,032 - 135,874,620 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	X	135,177,914 - 135,189,452 (-)	NCBI		T2T-CHM13v2.0

Rbmx
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	X	56,428,708 - 56,438,405 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	X	56,428,890 - 56,438,396 (-)	Ensembl		GRCm39 Ensembl
GRCm38	X	57,383,348 - 57,393,046 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	X	57,383,530 - 57,393,036 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	X	54,636,525 - 54,646,213 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	X	53,733,142 - 53,739,810 (-)	NCBI		MGSCv36	mm8
Celera	X	43,859,557 - 43,869,048 (-)	NCBI		Celera
Cytogenetic Map	X	A6	NCBI
cM Map	X	31.64	NCBI

Rbmx
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	X	140,342,544 - 140,352,121 (-)	NCBI		GRCr8
mRatBN7.2	X	135,305,237 - 135,314,806 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	X	135,305,325 - 135,314,743 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	X	137,505,126 - 137,511,592 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	X	141,062,859 - 141,069,326 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	X	138,632,261 - 138,638,728 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	X	159,881,835 - 159,891,405 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	X	159,884,885 - 159,891,326 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	X	154,508,654 - 154,518,218 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	X	142,112,807 - 142,119,267 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	X	143,341,911 - 143,347,131 (-)	NCBI		Celera
Cytogenetic Map	X	q36	NCBI

Rbmx
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955489	8,280,794 - 8,286,252 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955489	8,280,842 - 8,286,252 (+)	NCBI	ChiLan1.0	ChiLan1.0

RBMX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	X	136,287,749 - 136,299,314 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	X	136,295,612 - 136,302,914 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	X	125,997,989 - 126,009,525 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	X	136,264,406 - 136,275,360 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	X	136,264,406 - 136,275,360 (-)	Ensembl	panpan1.1		panPan2

Rbmx
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	X	105,172,114 - 105,184,736 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936513	10,429,824 - 10,437,108 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936513	10,429,862 - 10,442,509 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RBMX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	X	111,962,633 - 111,974,472 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	X	111,965,859 - 111,974,544 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	X	127,896,442 - 127,905,102 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RBMX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	X	111,880,859 - 111,892,660 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666065	49,555,769 - 49,587,076 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rbmx
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624808	10,176,293 - 10,182,079 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624808	10,176,695 - 10,185,847 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in RBMX
48 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005641876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038450982	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038524457	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038588429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038652950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000110	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000030124 ⟹ ENSCAFP00000027996

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	107,177,262 - 107,182,346 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000087877 ⟹ ENSCAFP00000051362

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	X	107,175,634 - 107,182,347 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845052055 ⟹ ENSCAFP00845040834

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	X	109,152,889 - 109,161,685 (-)	Ensembl

RefSeq Acc Id:

XM_005641876 ⟹ XP_005641933

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	X	107,173,599 - 107,182,404 (-)	NCBI
Dog10K_Boxer_Tasha	X	92,994,761 - 93,003,581 (-)	NCBI

Sequence:

show sequence

GTTCCCGGGCAGTATAAAGTTTGCTGTCTCCTTTGTTCGCCCTCGTTGCGCAGTAGTGCTAGCGGCTTCCCTCTTCCGCTCTCAGAGCCGGTGGCTCTCACTCGTGCTGAGCTGCTACGAAGCCCCTG
CCGGCGAGCTCGTAGGAGCTTGGAACGGTCGTCACCCCTCCGACTCTCACCAGGGGGAAAAAATGGTTGAAGCAGATCGCCCAGGAAAGCTTTTCATTGGTGGCCTCAATACGGAAACAAATGAAAAA
GCCCTTGAAGCAGTATTTGGCAAATATGGACGAATAGTGGAAGTTCTATTGATGAAAGATCGTGAAACCAACAAATCAAGAGGATTTGCTTTTGTCACCTTTGAGAGCCCAGCAGACGCTAAGGATGC
AGCCAGAGACATGAATGGAAAGTCCTTAGATGGAAAAGCCATCAAGGTAGAACAAGCCACAAAACCATCATTTGAAAGTGGTAGACGTGGACCACCTCCACCTCCAAGAAGCAGAGGCCCTCCAAGAG
GTCTTAGAGGCGGAAGAGGAGGAAGTGGAGGAACCAGGGGACCTCCTTCACGTGGAGGGCACATGGATGATGGTGGCTATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTTCCAGTAAAA
AGAGGACCACCACCACGAAGTGGTGGTCCTCCTCCTAAAAGATCTGCCCCTTCAGGACCAGTTCGCAGCAGCAGTGGAATGGGAGGAAGAGCTCCTGTGTCACGCGGAAGAGATAGTTATGGAGGCCC
ACCTCGAAGGGAACCCCTGCCCTCTCGTAGAGATGTGTATTTGTCCCCAAGAGATGATGGATATTCTACTAAAGACAGCTATTCAAGCAGAGATTACCCAAGTTCTCGTGATACAAGAGATTATGCAC
CACCACCAAGAGATTATACTTACCGTGATTATGGTCATTCCAGTTCACGTGATGACTACCCATCAAGAGGCTATAGTGATAGAGATGGCTATGGTCGTGATCGTGACTATTCAGATCATCCAAGTGGA
GGTTCCTACAGAGATTCATATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGTGACGGATATGG
TGGAAGTCGAGACAGTTACTCAAGCAGCCGAAGTGATCTCTACTCAAGTGGTCGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTCCCCCTTCTATGGAAAGGGGGTACCCTCCTCCACGTGATTCCT
ACAGCAGTTCAAGCCGCGGAGCACCAAGAGGTGGTGGCCGTGGAGGAAGCCGATCTGATAGAGGGGGAGGCAGAAGCAGATATTAAAAACAAAACAAAACTTTGGACCAAAATCCCCGTTCAAAGAAA
ACAAACAAAAAAGTGGAACCTTTTCTGTCATAACTACCCAAGGACTACTAAAAGGAAAAATTGTGTTACCTTTTTTAAATTTCCTGTTAAGTTCCCCTTCCATAATTTTTATGTTCTTGTGAGGGAAA
AAAGTAAAACCTGTTTAATCTTATTTGACTTTATGACATTGCTTTCAATAAGCAAATGTTAAATGTGTTAAGACTTGACTTGTGTACTAGTGTTGTAATTTTTCAAGTTAAAAGTGTCCCTAAAGGCC
ACTTCCTATATCTGATTTTTCCCAGTAAATGAGGCAAAGCAATTCTAAGACCTTCCACAAACATCTAGCCTTCTAAAATGGAGAGGTGAATCCTTCTGCCTATACAAACAAGCTAGCTATTAGAGGGT
GGTCGGGGTATGCTACTCTTAGGATTTCAGAGTGTCTTCAAACTGAAATCTCAATGTTCTCAGTAATGAAAAACCTGAGATCAGATGCTTATGTAAGGAAAGTGCTATTCACCCAGTAAATCCAAAAA
AGCAAATGGATAATGCTGGCCATATTTTGCCTTTCTGACATTTCCTTGGGAATCTACAAGAACCTCCCCTCTCCCCTCCCCCAATAAGACCATTTAAGTGTGTGTTAAGCAACTACAGAATACTAAAT
AAAAAGTTTGGCCAAAACCAACCATGAAGCTGCAAACGGTGCTTGCTCTTACTGTTTCAAATTTTTGCAACTCTGTAGTGTCTCACTTTTAAGGAACAGCTTGATTGCAAAGGAGAAAATAGATAAGC
AATGAAGTTATCTCCAACTTCTCAAAGGCTTATGACTTCTAAAAAGTGAATCTATCAGCATTCCACATCAGATTTAAAGCATCAAATGCCTGTGAAACCGCAAAGATGGTTGAGGATTTTGGTCATTA
TGGTTGGAGTGCTGATTTATTCACACTAGATAAAGCTGGCAGCAAGAGAAATCAAATGCTAAGAGTTGTTGAAGCAGAAGAATGCTGATTGTCGATAAGGCACAACAGTTGCATAAGCAGTACTCATC
AGAATTGGTTTGGTGCAGGCAATAGATTTTGCCTTCGAGGGTTCCTGTGGATCTAAGGAGGGAAGGCATCAGTGTTGGTTAGCACTTAACTAGGGAGTGGTAGTTACTTCAAAAAAGTAATTGACCAG
ATAAAGGGGAGCAGTTAAGGAAATTGGTAAGTGGAGGTAGTAAGTTCTTGTGGTTCTTTATGTGGATTTTACAGCTTTGGCTTTCATTTTGTTAAAGTCCTAGGGGACAACTCTGTGATTCCTAATTA
TCACTGACTGTCAGAAAGTTGAAGTAGAAAAATGAAAGGCATGAGTGGTAACTCTTTATCCAGTAAACTGATTTTTCAGCAAGTGGAATATTTGTAGTTTACCCAGAAGTGGGGTTCAGTCATAAAAG
AAGGGGAGGAGTAGTGTCTGGAACCTAAAGTAACTGGAAACATAGCTAAAATGACTGGAACAAAATTGGGCCACTTGGCTTTTAAGTATTTTGTAAGCCTGCTATAACCCCACCACCTGTCTTAGAAG
CAAACCAGTCATGTTGAAGACCGAGCTGAGTATATATAAAAGCTAATGTTCTCAGAGGAACTGGATTTGAATTGTTGCGTTAGAACGAAGTACAAAAACTTCTGAGATTTTTGTTTTCATAGTAAAAT
CAGTGCTTATCGTGTTTAATCTTGGCAATTGTAGGAAATAGTCCAAATACTGTAACCCTCATTGGACAGGCTCTTGTAATTGCAGATCATGATGAGGGTATTGACCAAATTTAAGTAGCTATTGCACT
TACATAACTGTCTTCCTCAATCCTCCAATAATGTAAACTACTTGGGATTGTGCTTCTGATGACTTTGGCTTTGGAGATTTTTAGATATCTTGAAAATAGTGTAGAACATAGAAATTAATCATAGTAAA
CGTAAATACTAAATTCAAATTAAGCAAACCTAAATGACTATTCAGCTATTTGGCAAAGTTTACTGACCCAGCAGACTTACTCTCCCATTGGGAAAAGAATCCATCTTGATTCTTCTGGCTTTATATTG
GTTGTAAGACAGAATGATAAAATGTTTTGTTTAACTGGTAGTTGATTATAGAACCTAGATATTATAGATCACTTTTCTCTTTTTGGAATGTTTTGTATTTGAAACTTAATAAAACTTAACCTGCATTT
TTTTGTGA

hide sequence

RefSeq Acc Id:

XM_038450982 ⟹ XP_038306910

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	X	109,152,874 - 109,161,692 (-)	NCBI

RefSeq Acc Id:

XM_038524457 ⟹ XP_038380385

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	X	106,293,550 - 106,302,363 (-)	NCBI

RefSeq Acc Id:

XM_038588429 ⟹ XP_038444357

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	X	108,127,392 - 108,136,215 (-)	NCBI

RefSeq Acc Id:

XM_038652950 ⟹ XP_038508878

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	X	108,485,256 - 108,494,069 (-)	NCBI


Protein RefSeqs	XP_005641933	(Get FASTA)	NCBI Sequence Viewer
	XP_038306910	(Get FASTA)	NCBI Sequence Viewer
	XP_038380385	(Get FASTA)	NCBI Sequence Viewer
	XP_038444357	(Get FASTA)	NCBI Sequence Viewer
	XP_038508878	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000027996.4
	ENSCAFP00040014970.1
	ENSCAFP00845031285.1
	ENSCAFP00845040834
	ENSCAFP00845040834.1

RefSeq Acc Id:

XP_005641933 ⟸ XM_005641876

- UniProtKB:

A0A8C0LEY8 (UniProtKB/TrEMBL), A0A8C0S2U1 (UniProtKB/TrEMBL), A0A8I3PPR8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGPPPPPRSRGPPRGLRGGRGGSGGTRGPPSRGGH
MDDGGYSMNFNMSSSRGPLPVKRGPPPRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRRDVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYP
SRGYSDRDGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDR
GGGRSRY

hide sequence

Ensembl Acc Id:

ENSCAFP00000051362 ⟸ ENSCAFT00000087877

Ensembl Acc Id:

ENSCAFP00000027996 ⟸ ENSCAFT00000030124

RefSeq Acc Id:

XP_038380385 ⟸ XM_038524457

RefSeq Acc Id:

XP_038508878 ⟸ XM_038652950

Protein Domains

RRM

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000018962	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040009318	UniProtKB/TrEMBL
	ENSCAFG00845022642	UniProtKB/TrEMBL
	ENSCAFG00845029404	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000030124.5	UniProtKB/TrEMBL
	ENSCAFT00040017271.1	UniProtKB/TrEMBL
	ENSCAFT00845039952.1	UniProtKB/TrEMBL
	ENSCAFT00845052055	ENTREZGENE
	ENSCAFT00845052055.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RBM	UniProtKB/TrEMBL
	RBM1CTR	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
	RRM_dom_euk	UniProtKB/TrEMBL
KEGG Report	cfa:481063	UniProtKB/TrEMBL
NCBI Gene	RBMX	ENTREZGENE
PANTHER	TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED	UniProtKB/TrEMBL
Pfam	RBM1CTR	UniProtKB/TrEMBL
	RRM_1	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
SMART	RRM	UniProtKB/TrEMBL
	RRM_1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8C0LEY8	ENTREZGENE
	A0A8C0S2U1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PPR8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:54838	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-05-01	RBMX	RNA binding motif protein X-linked		RNA binding motif protein, X-linked	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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