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Gene: U2AF1L4 (U2 small nuclear RNA auxiliary factor 1 like 4) Canis lupus familiaris

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Symbol:

U2AF1L4

Name:

U2 small nuclear RNA auxiliary factor 1 like 4

RGD ID:

12374821

Description:

ENCODES a protein that exhibits metal ion binding (inferred); RNA binding (inferred); zinc ion binding (inferred); INVOLVED IN mRNA splicing, via spliceosome (inferred); ASSOCIATED WITH Brugada syndrome 5 (ortholog); dystonia (ortholog); hereditary spastic paraplegia 75 (ortholog); FOUND IN U2AF complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

splicing factor U2AF 26 kDa subunit; TMEM149; transmembrane protein 149

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	116,888,680 - 116,890,911 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	116,888,720 - 116,890,923 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	116,293,931 - 116,296,172 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	117,491,646 - 117,493,887 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	117,491,675 - 117,497,074 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	117,055,022 - 117,057,262 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	116,678,643 - 116,680,884 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	117,734,028 - 117,736,264 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brugada syndrome 5 (ISO)

dystonia (ISO)

hereditary spastic paraplegia 75 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA splicing, via spliceosome (IBA,IEA)

Cellular Component

spliceosomal complex (IBA)

U2AF complex (IBA,IEA)

Molecular Function

metal ion binding (IEA)

pre-mRNA 3'-splice site binding (IBA)

protein binding (ISO)

RNA binding (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

U2AF1L4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	116,888,680 - 116,890,911 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	116,888,720 - 116,890,923 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	116,293,931 - 116,296,172 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	117,491,646 - 117,493,887 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	117,491,675 - 117,497,074 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	117,055,022 - 117,057,262 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	116,678,643 - 116,680,884 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	117,734,028 - 117,736,264 (+)	NCBI		UU_Cfam_GSD_1.0

U2AF1L4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	35,742,464 - 35,745,418 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	35,742,464 - 35,745,445 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	36,233,365 - 36,236,319 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	40,925,268 - 40,928,176 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	40,925,272 - 40,928,146	NCBI
Celera	19	32,946,905 - 32,949,813 (-)	NCBI		Celera
Cytogenetic Map	19	q13.12	NCBI
HuRef	19	32,738,416 - 32,741,324 (-)	NCBI		HuRef
CHM1_1	19	36,234,748 - 36,237,646 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	38,287,776 - 38,290,728 (-)	NCBI		T2T-CHM13v2.0

U2af1l4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	30,262,765 - 30,264,789 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	30,262,769 - 30,267,385 (+)	Ensembl		GRCm39 Ensembl
GRCm39 Ensembl	7	30,262,726 - 30,264,790 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	30,563,340 - 30,565,364 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	30,563,344 - 30,567,960 (+)	Ensembl	GRCm38		mm10	GRCm38
GRCm38.p6 Ensembl	7	30,563,301 - 30,565,365 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	31,348,359 - 31,350,383 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	30,272,100 - 30,274,124 (+)	NCBI		MGSCv36	mm8
Celera	7	25,155,101 - 25,157,125 (+)	NCBI		Celera
Cytogenetic Map	7	B1	NCBI
cM Map	7	18.61	NCBI

U2af1l4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	94,943,684 - 94,945,906 (+)	NCBI		GRCr8
mRatBN7.2	1	85,816,268 - 85,818,462 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	85,815,101 - 85,818,462 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	91,233,050 - 91,235,194 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	99,699,215 - 99,701,359 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	92,991,331 - 92,993,475 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	89,017,414 - 89,019,651 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	89,017,479 - 89,019,937 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	90,172,229 - 90,174,953 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	85,608,372 - 85,610,419 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	85,686,482 - 85,688,530 (+)	NCBI
Celera	1	80,187,746 - 80,189,793 (+)	NCBI		Celera
Cytogenetic Map	1	q21	NCBI

U2AF1L4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	41,736,801 - 41,739,749 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	43,722,105 - 43,725,074 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	32,672,304 - 32,675,256 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	41,406,661 - 41,409,548 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	41,406,661 - 41,409,548 (-)	Ensembl	panpan1.1		panPan2

U2af1l4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	11,065,553 - 11,067,704 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936570	578,178 - 580,133 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936570	578,088 - 580,321 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

U2AF1L4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	45,168,927 - 45,172,305 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	45,167,556 - 45,172,382 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	40,625,562 - 40,627,833 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

U2AF1L4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	30,652,352 - 30,655,077 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666073	8,443,549 - 8,446,421 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in U2AF1L4
20 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005616693	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038468511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038468512	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038468513	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038529284	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038529285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038529286	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038593541	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038593542	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038593543	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038657395	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038657396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038657397	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000011	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000011030 ⟹ ENSCAFP00000010223

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	116,888,720 - 116,890,907 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000068056 ⟹ ENSCAFP00000053045

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	116,888,720 - 116,890,907 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000088080 ⟹ ENSCAFP00000047784

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	116,888,720 - 116,890,908 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000090943 ⟹ ENSCAFP00000062052

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	116,888,720 - 116,890,923 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845002502 ⟹ ENSCAFP00845001989

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	117,491,675 - 117,497,074 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845002521 ⟹ ENSCAFP00845002003

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	117,491,675 - 117,493,594 (+)	Ensembl

RefSeq Acc Id:

XM_005616693 ⟹ XP_005616750

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	116,888,680 - 116,890,911 (+)	NCBI
Dog10K_Boxer_Tasha	1	116,293,931 - 116,296,172 (+)	NCBI

Sequence:

show sequence

ACGGAAGTGACGTAAGGGCAGACAGAGTTGGAGGGTTCGGGTAAAAATGGCTGAATATTTAGCT
TCGATATTCGGGACTGAGAAGGACAAGGTTAACTGCTCTTTTTACTTTAAGATCGGGGCCTGCC
GGCACGGGGACCGGTGCTCCCGGCTTCACAACAAGCCGACTTTCAGCCAGACCATAGTGCTGCT
CAACCTGTACCGGAATCCACAGAACACCGCCCAAACCGCAGACGGATCGCACTGTCACGTGAGC
GACGTGGAGGTGCAGGAACACTATGATAACTTCTTCGAGGAGGTGTTCACGGAGCTGCAGGAGA
AGTATGGGGAGATTGAAGAGATGAATGTGTGCGACAACCTGGGGGACCACCTCGTGGGCAATGT
CTATGTCAAGTTTCGGCGAGAGGAGGATGCAGAGCGGGCAGTGGCCGAACTCAATAACCGCTGG
TTCAATGGGCAGGCTGTGCACGCTGAGCTGTCTCCTGTCACTGACTTCCGGGAGTCGTGCTGCC
GGCAGTATGAGATGGGGGAATGTACCCGCGGTGGTTTCTGCAACTTCATGCACCTGCGGCCCAT
CTCCCGGAACCTCCGACGTCAGCTGTATGGGCGGGGACCCAGACGCAGGTCACCCCCGAGGTCT
CATACCGGCCACCGTCCCCGAGAAAGAAACCGACGACGTTCCCCAGACCACCGGCATGGTCGCT
TCTGAGACCCTGGCTCCCTTGACCCACTCCTGACAGGCATCAGTGTTCCTGGCCAGGACCCCTC
CTGAAAGCTCCCTTACCTCGCCAGCGCCGTCTTCCCCAGACTCCGGGGCTCCAAGATGTAATCT
GTTCAACACAGGGATCTTCTCTTACCACCCCTTCCCTAATAAAGTTCTCTATTGAGGGTTTAGA
A

hide sequence

RefSeq Acc Id:

XM_038453018 ⟹ XP_038308946

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	1	116,293,931 - 116,296,172 (+)	NCBI

RefSeq Acc Id:

XM_038453021 ⟹ XP_038308949

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	1	116,293,931 - 116,296,172 (+)	NCBI

RefSeq Acc Id:

XM_038468511 ⟹ XP_038324439

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	117,055,022 - 117,057,262 (+)	NCBI

RefSeq Acc Id:

XM_038468512 ⟹ XP_038324440

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	117,055,022 - 117,057,262 (+)	NCBI

RefSeq Acc Id:

XM_038468513 ⟹ XP_038324441

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	117,055,022 - 117,057,262 (+)	NCBI

RefSeq Acc Id:

XM_038529284 ⟹ XP_038385212

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	117,734,028 - 117,736,264 (+)	NCBI

RefSeq Acc Id:

XM_038529285 ⟹ XP_038385213

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	117,734,028 - 117,736,264 (+)	NCBI

RefSeq Acc Id:

XM_038529286 ⟹ XP_038385214

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	117,734,028 - 117,736,264 (+)	NCBI

RefSeq Acc Id:

XM_038593541 ⟹ XP_038449469

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	116,678,643 - 116,680,884 (+)	NCBI

RefSeq Acc Id:

XM_038593542 ⟹ XP_038449470

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	116,678,643 - 116,680,884 (+)	NCBI

RefSeq Acc Id:

XM_038593543 ⟹ XP_038449471

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	116,678,643 - 116,680,884 (+)	NCBI

RefSeq Acc Id:

XM_038657395 ⟹ XP_038513323

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	117,491,646 - 117,493,887 (+)	NCBI

RefSeq Acc Id:

XM_038657396 ⟹ XP_038513324

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	117,491,646 - 117,493,887 (+)	NCBI

RefSeq Acc Id:

XM_038657397 ⟹ XP_038513325

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	117,491,646 - 117,493,887 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005616750	(Get FASTA)	NCBI Sequence Viewer
	XP_038308946	(Get FASTA)	NCBI Sequence Viewer
	XP_038308949	(Get FASTA)	NCBI Sequence Viewer
	XP_038324439	(Get FASTA)	NCBI Sequence Viewer
	XP_038324440	(Get FASTA)	NCBI Sequence Viewer
	XP_038324441	(Get FASTA)	NCBI Sequence Viewer
	XP_038385212	(Get FASTA)	NCBI Sequence Viewer
	XP_038385213	(Get FASTA)	NCBI Sequence Viewer
	XP_038385214	(Get FASTA)	NCBI Sequence Viewer
	XP_038449469	(Get FASTA)	NCBI Sequence Viewer
	XP_038449470	(Get FASTA)	NCBI Sequence Viewer
	XP_038449471	(Get FASTA)	NCBI Sequence Viewer
	XP_038513323	(Get FASTA)	NCBI Sequence Viewer
	XP_038513324	(Get FASTA)	NCBI Sequence Viewer
	XP_038513325	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000047784.2
	ENSCAFP00000069274.1
	ENSCAFP00030010136.1
	ENSCAFP00030010172.1
	ENSCAFP00040035066.1
	ENSCAFP00040035089.1
	ENSCAFP00845001989
	ENSCAFP00845001989.1
	ENSCAFP00845002003.1

RefSeq Acc Id:	XP_005616750 ⟸ XM_005616693
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z3X2 (UniProtKB/TrEMBL), A0A8C0L1E7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIVLLNLYRNPQNTAQTADG SHCHVSDVEVQEHYDNFFEEVFTELQEKYGEIEEMNVCDNLGDHLVGNVYVKFRREEDAERAVA ELNNRWFNGQAVHAELSPVTDFRESCCRQYEMGECTRGGFCNFMHLRPISRNLRRQLYGRGPRR RSPPRSHTGHRPRERNRRRSPDHRHGRF hide sequence

Ensembl Acc Id:

ENSCAFP00000047784 ⟸ ENSCAFT00000088080

Ensembl Acc Id:

ENSCAFP00000010223 ⟸ ENSCAFT00000011030

Ensembl Acc Id:

ENSCAFP00000053045 ⟸ ENSCAFT00000068056

Ensembl Acc Id:

ENSCAFP00000062052 ⟸ ENSCAFT00000090943

RefSeq Acc Id:	XP_038324439 ⟸ XM_038468511
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038324440 ⟸ XM_038468512
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038324441 ⟸ XM_038468513
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038449469 ⟸ XM_038593541
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038449470 ⟸ XM_038593542
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038449471 ⟸ XM_038593543
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038513323 ⟸ XM_038657395
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z3X2 (UniProtKB/TrEMBL), A0A8C0L1E7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038513324 ⟸ XM_038657396
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038513325 ⟸ XM_038657397
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0L1S6 (UniProtKB/TrEMBL), A0A8C0TDU3 (UniProtKB/TrEMBL), A0A8I3MYY4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038308946 ⟸ XM_038453018
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038308949 ⟸ XM_038453021
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0L1S6 (UniProtKB/TrEMBL), A0A8C0TDU3 (UniProtKB/TrEMBL), A0A8I3MYY4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038385212 ⟸ XM_038529284
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0L1E7 (UniProtKB/TrEMBL), A0A8C0Z3X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038385213 ⟸ XM_038529285
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038385214 ⟸ XM_038529286
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0L1S6 (UniProtKB/TrEMBL), A0A8C0TDU3 (UniProtKB/TrEMBL), A0A8I3MYY4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845002003 ⟸ ENSCAFT00845002521

Ensembl Acc Id:

ENSCAFP00845001989 ⟸ ENSCAFT00845002502

Protein Domains

C3H1-type RRM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000006856	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030006303	UniProtKB/TrEMBL
	ENSCAFG00040021644	UniProtKB/TrEMBL
	ENSCAFG00845001465	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000088080.2	UniProtKB/TrEMBL
	ENSCAFT00000100018.1	UniProtKB/TrEMBL
	ENSCAFT00030011587.1	UniProtKB/TrEMBL
	ENSCAFT00030011625.1	UniProtKB/TrEMBL
	ENSCAFT00040040179.1	UniProtKB/TrEMBL
	ENSCAFT00040040207.1	UniProtKB/TrEMBL
	ENSCAFT00845002502	ENTREZGENE
	ENSCAFT00845002502.1	UniProtKB/TrEMBL
	ENSCAFT00845002521.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.70.330	UniProtKB/TrEMBL
InterPro	Nucleotide-bd_a/b_plait_sf	UniProtKB/TrEMBL
	RBD_domain_sf	UniProtKB/TrEMBL
	RRM_dom	UniProtKB/TrEMBL
	RRM_dom_euk	UniProtKB/TrEMBL
	U2AF_small	UniProtKB/TrEMBL
	Znf_CCCH	UniProtKB/TrEMBL
KEGG Report	cfa:476480	UniProtKB/TrEMBL
NCBI Gene	U2AF1L4	ENTREZGENE
PANTHER	PTHR12620	UniProtKB/TrEMBL
	SPLICING FACTOR U2AF 26 KDA SUBUNIT	UniProtKB/TrEMBL
	U2 SMALL NUCLEAR RNA AUXILIARY FACTOR 1	UniProtKB/TrEMBL
Pfam	RRM_1	UniProtKB/TrEMBL
	zf-CCCH	UniProtKB/TrEMBL
PRINTS	U2AUXFACTOR	UniProtKB/TrEMBL
PROSITE	RRM	UniProtKB/TrEMBL
	ZF_C3H1	UniProtKB/TrEMBL
SMART	RRM	UniProtKB/TrEMBL
	RRM_1	UniProtKB/TrEMBL
	ZnF_C3H1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF54928	UniProtKB/TrEMBL
UniProt	A0A8C0L1E7	ENTREZGENE
	A0A8C0L1S6	ENTREZGENE
	A0A8C0TDU3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z3X2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MJJ3_CANLF	UniProtKB/TrEMBL
	A0A8I3MYY4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0T0Q3_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:58341	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar